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FFCP PHASE1:Mm9::chr7:133630858..133630904,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=233870|HGNC=|UniProt=Q8BFR5|association_with_transcript=0bp_to_ENSMUST00000098048,ENSMUST00000106392,NM_001163713,NM_172745,uc009jro.2,uc009jrp.2,uc009jrq.2_5end|description=CAGE_peak_1_at_Tufm_5end|id=chr7:133630858..133630904,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!7.84e-09!47;UBERON:0009854!3.28e-07!23;UBERON:0009856!3.28e-07!23;UBERON:0007100!4.97e-07!18;UBERON:0000948!4.97e-07!18;UBERON:0005498!4.97e-07!18;UBERON:0004140!4.97e-07!18;UBERON:0009881!4.97e-07!18;UBERON:0004141!4.97e-07!18;UBERON:0003084!4.97e-07!18;UBERON:0007005!4.97e-07!18;UBERON:0004139!4.97e-07!18;UBERON:0004291!4.97e-07!18;UBERON:0002107!9.30e-07!22;UBERON:0007499!9.30e-07!22;UBERON:0006925!9.30e-07!22;UBERON:0009497!9.30e-07!22;UBERON:0000015!9.30e-07!22;UBERON:0002423!9.30e-07!22;UBERON:0006235!9.30e-07!22;UBERON:0008835!9.30e-07!22;UBERON:0003894!9.30e-07!22;UBERON:0004161!9.30e-07!22;UBERON:0008836!9.30e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.84e-09,47;UBERON:0009854,3.28e-07,23;UBERON:0009856,3.28e-07,23;UBERON:0007100,4.97e-07,18;UBERON:0000948,4.97e-07,18;UBERON:0005498,4.97e-07,18;UBERON:0004140,4.97e-07,18;UBERON:0009881,4.97e-07,18;UBERON:0004141,4.97e-07,18;UBERON:0003084,4.97e-07,18;UBERON:0007005,4.97e-07,18;UBERON:0004139,4.97e-07,18;UBERON:0004291,4.97e-07,18;UBERON:0002107,9.30e-07,22;UBERON:0007499,9.30e-07,22;UBERON:0006925,9.30e-07,22;UBERON:0009497,9.30e-07,22;UBERON:0000015,9.30e-07,22;UBERON:0002423,9.30e-07,22;UBERON:0006235,9.30e-07,22;UBERON:0008835,9.30e-07,22;UBERON:0003894,9.30e-07,22;UBERON:0004161,9.30e-07,22;UBERON:0008836,9.30e-07,22|phase1_expression=29.7876855614917,56.8829914452159,41.4049307844478,45.0671674847177,42.0752413154932,60.6044171601922,77.325784037119,49.97072617189,65.3259670783734,62.0270994753283,77.3905216379282,91.0200334136788,45.7105948916319,40.6504871248338,50.6326837959807,48.9990147083379,31.4802845157666,47.3193248037357,50.0467682660947,52.6243168229557,40.7357359823624,42.9929818699833,58.5087527671215,92.7956052201759,75.9344720332333,58.5716603397321,74.952587331679,88.9896190992722,61.3775644844088,58.218959974544,88.4704737514666,104.780061120839,131.008799755513,63.3926724061755,118.718015717774,129.829258024983,102.901355556234,7.95210098400125,18.7520482685712,12.0410461113974,8.2352408324342,6.14740936462601,11.6522484727477,37.1395613027953,34.1640258209764,38.9119114582765,68.0680469582794,117.0795089763,82.8216908908959,71.355772960262,74.3327898830675,96.314218124531,30.536434302508,30.4652099644765,36.2981303073861,45.0204013062907,35.8166799923446,31.9716697212014,79.5103691178219,69.8268092639083,91.905553508396,104.025271345224,68.4756993005577,65.6926793615421,82.0759080930589,77.4423325291249,75.7988279611564,82.2227173388127,65.5318349789579,70.0680819941474,67.3039876324422,55.7019419587417,62.7266656302582,67.9823935642995,72.4591760897867,80.8912532216818,28.6301290598411,29.7511497738487,39.6304855801108,70.1635050724631,70.6284608610602,62.5096044668112,50.5321228192499,40.518907922281,37.2827724575417,55.0955454835759,50.6843183644806,72.8821833176925,68.0778478065325,51.086374632187,34.204009666798,101.530017483804,108.79541339324,133.306688334541,126.706401402295,123.207393951767,69.9413212256124,24.2011058060842,53.2561309435881,41.3407302177098,31.1263957706464,35.931413676009,15.2883143823987,21.3320010945999,68.6276600005549,65.8735650235256,82.4004845374097,61.8876628077305,29.0010429684832,71.5491110292455,70.261557340285,81.2922827093417,85.7889649792538,80.0337221334426,48.3289586327747,105.685603308257,33.1241256764061,75.1916655983541,46.8843592533433,41.897614136379,38.6472657305689,37.8202697445473,91.3319629968799,37.475942017478,24.9241581108012,71.0170613479884,43.8523355691668,61.789981292321,45.3640710650841,34.7514283419189,27.4500361691176,42.9737884225996,35.4601613192244,31.4530012516307,35.1161795305657,33.7461827180936,27.9039856949867,33.3410681235049,30.0740082536073,31.3558365270846,59.4650424339556,51.2681692886645,52.0379555137459,45.8142646220574,20.751132241155,31.9003163509276,35.0444449853386,29.2334808935088,70.7063016819722,54.0843389279963,49.2663147659057,60.4980221500107,39.4827093900349,36.9147296513497,30.4557561883756,56.923800310089,61.7947604835647,73.0868056205791,41.7720344111521,77.4650389282777,82.787699173327,86.6098515627481,87.5955521665278,96.6112377879753,102.433362957219,111.151225590695,129.307779474616,91.0769670463922,110.255099442032,111.962210501943,118.279393127404,138.889988054066,143.585775400347,141.856184629713,33.015521924568,35.090472821336,33.3722970813636,97.0533579655207,62.7067456573588,52.2532511685987,67.7842846554211,66.1521960764563,70.0490838111342,64.4864872521575,59.7906617546085,45.456911503827,40.9676390344439,41.1839897125182,39.5777096851814,59.3220809711786,59.8702398152903,51.1793072263724,61.07306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|EntrezGene=233870
|HGNC=
|UniProt=Q8BFR5
|association_with_transcript=0bp_to_ENSMUST00000098048,ENSMUST00000106392,NM_001163713,NM_172745,uc009jro.2,uc009jrp.2,uc009jrq.2_5end
|description=CAGE_peak_1_at_Tufm_5end
|id=chr7:133630858..133630904,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!7.84e-09!47;UBERON:0009854!3.28e-07!23;UBERON:0009856!3.28e-07!23;UBERON:0007100!4.97e-07!18;UBERON:0000948!4.97e-07!18;UBERON:0005498!4.97e-07!18;UBERON:0004140!4.97e-07!18;UBERON:0009881!4.97e-07!18;UBERON:0004141!4.97e-07!18;UBERON:0003084!4.97e-07!18;UBERON:0007005!4.97e-07!18;UBERON:0004139!4.97e-07!18;UBERON:0004291!4.97e-07!18;UBERON:0002107!9.30e-07!22;UBERON:0007499!9.30e-07!22;UBERON:0006925!9.30e-07!22;UBERON:0009497!9.30e-07!22;UBERON:0000015!9.30e-07!22;UBERON:0002423!9.30e-07!22;UBERON:0006235!9.30e-07!22;UBERON:0008835!9.30e-07!22;UBERON:0003894!9.30e-07!22;UBERON:0004161!9.30e-07!22;UBERON:0008836!9.30e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.84e-09,47;UBERON:0009854,3.28e-07,23;UBERON:0009856,3.28e-07,23;UBERON:0007100,4.97e-07,18;UBERON:0000948,4.97e-07,18;UBERON:0005498,4.97e-07,18;UBERON:0004140,4.97e-07,18;UBERON:0009881,4.97e-07,18;UBERON:0004141,4.97e-07,18;UBERON:0003084,4.97e-07,18;UBERON:0007005,4.97e-07,18;UBERON:0004139,4.97e-07,18;UBERON:0004291,4.97e-07,18;UBERON:0002107,9.30e-07,22;UBERON:0007499,9.30e-07,22;UBERON:0006925,9.30e-07,22;UBERON:0009497,9.30e-07,22;UBERON:0000015,9.30e-07,22;UBERON:0002423,9.30e-07,22;UBERON:0006235,9.30e-07,22;UBERON:0008835,9.30e-07,22;UBERON:0003894,9.30e-07,22;UBERON:0004161,9.30e-07,22;UBERON:0008836,9.30e-07,22
|phase1_expression=29.7876855614917,56.8829914452159,41.4049307844478,45.0671674847177,42.0752413154932,60.6044171601922,77.325784037119,49.97072617189,65.3259670783734,62.0270994753283,77.3905216379282,91.0200334136788,45.7105948916319,40.6504871248338,50.6326837959807,48.9990147083379,31.4802845157666,47.3193248037357,50.0467682660947,52.6243168229557,40.7357359823624,42.9929818699833,58.5087527671215,92.7956052201759,75.9344720332333,58.5716603397321,74.952587331679,88.9896190992722,61.3775644844088,58.218959974544,88.4704737514666,104.780061120839,131.008799755513,63.3926724061755,118.718015717774,129.829258024983,102.901355556234,7.95210098400125,18.7520482685712,12.0410461113974,8.2352408324342,6.14740936462601,11.6522484727477,37.1395613027953,34.1640258209764,38.9119114582765,68.0680469582794,117.0795089763,82.8216908908959,71.355772960262,74.3327898830675,96.314218124531,30.536434302508,30.4652099644765,36.2981303073861,45.0204013062907,35.8166799923446,31.9716697212014,79.5103691178219,69.8268092639083,91.905553508396,104.025271345224,68.4756993005577,65.6926793615421,82.0759080930589,77.4423325291249,75.7988279611564,82.2227173388127,65.5318349789579,70.0680819941474,67.3039876324422,55.7019419587417,62.7266656302582,67.9823935642995,72.4591760897867,80.8912532216818,28.6301290598411,29.7511497738487,39.6304855801108,70.1635050724631,70.6284608610602,62.5096044668112,50.5321228192499,40.518907922281,37.2827724575417,55.0955454835759,50.6843183644806,72.8821833176925,68.0778478065325,51.086374632187,34.204009666798,101.530017483804,108.79541339324,133.306688334541,126.706401402295,123.207393951767,69.9413212256124,24.2011058060842,53.2561309435881,41.3407302177098,31.1263957706464,35.931413676009,15.2883143823987,21.3320010945999,68.6276600005549,65.8735650235256,82.4004845374097,61.8876628077305,29.0010429684832,71.5491110292455,70.261557340285,81.2922827093417,85.7889649792538,80.0337221334426,48.3289586327747,105.685603308257,33.1241256764061,75.1916655983541,46.8843592533433,41.897614136379,38.6472657305689,37.8202697445473,91.3319629968799,37.475942017478,24.9241581108012,71.0170613479884,43.8523355691668,61.789981292321,45.3640710650841,34.7514283419189,27.4500361691176,42.9737884225996,35.4601613192244,31.4530012516307,35.1161795305657,33.7461827180936,27.9039856949867,33.3410681235049,30.0740082536073,31.3558365270846,59.4650424339556,51.2681692886645,52.0379555137459,45.8142646220574,20.751132241155,31.9003163509276,35.0444449853386,29.2334808935088,70.7063016819722,54.0843389279963,49.2663147659057,60.4980221500107,39.4827093900349,36.9147296513497,30.4557561883756,56.923800310089,61.7947604835647,73.0868056205791,41.7720344111521,77.4650389282777,82.787699173327,86.6098515627481,87.5955521665278,96.6112377879753,102.433362957219,111.151225590695,129.307779474616,91.0769670463922,110.255099442032,111.962210501943,118.279393127404,138.889988054066,143.585775400347,141.856184629713,33.015521924568,35.090472821336,33.3722970813636,97.0533579655207,62.7067456573588,52.2532511685987,67.7842846554211,66.1521960764563,70.0490838111342,64.4864872521575,59.7906617546085,45.456911503827,40.9676390344439,41.1839897125182,39.5777096851814,59.3220809711786,59.8702398152903,51.1793072263724,61.0730641068923,59.6377235822784,42.8289395557706,63.9465169434287,55.8583163042762,44.3959739905716,61.5923871590266,92.1087323392717,92.9432468820939,92.177681449585,103.758419480502,70.2417895064756,74.6924181430171,73.9796349746169,64.7123787229324,70.6649078074581,62.6379595382293,74.5132995997599,30.6435578604817,98.8421087477093,40.2550978276593,75.1724714290377,100.788168416003,109.619233029046,129.704329976343,85.8749468026794,26.2349530036579,63.4796229431124,50.68210767347,54.8276627053858,40.3667227056224,39.3639704988267,30.7076296742958,22.6355031515047,22.3841904630791,21.0391455166336,24.874943910568,27.8567635016755,24.1758974612254,21.8420078458082,40.7136466636035,59.2857195362393,31.9646777462374,51.600171558985,42.3853557567771,34.2258124849233,40.0001266719088,85.5876443222824,53.3208890813474,51.5379142471563,49.1165346830782,43.731290025317,40.1037613348309,37.3661020641259,42.9099343775388,44.4228904025194,45.8533822417967,32.1321316421807,42.7239656476889,58.4055180028597,23.9443830249757,38.7679788985458,37.1686387351896,65.550771761845,71.9530065576107,45.6424293009273,58.469774790393,47.9598830792527,22.224833212467,27.9920971697679,31.3717692978555,33.4998963411965,44.2758156014995,34.0347292719017,23.1498931912576,50.7772285168295,70.2417652940357,62.5864142292249,50.7193068216902,50.3000065637839,45.2509806655833,36.2313289446373,50.4544172336977,28.1736654248881,33.2997881062992,29.184866770642,18.4069446433332,34.5593059838333,35.9310755449441,32.9923208487573,54.5069164497821,32.0785772478182,45.280783411431,44.5795634800561,51.6692731361496,31.6459007767881,36.2239703460717,33.8591696345653,25.4967644990783,26.8706788461423,21.2827959658813,54.4162252268615,56.1496388606515,49.6099499789511,57.7828573396637,54.3629569637619,50.8784773528594,47.2025212346872,40.4175398496893,54.1834799906941,51.4571443968418,36.0376801590417,57.4966797457874,53.8259565758324,66.3488546732961,59.8909660099667,70.3921037953635,52.545355027632,32.7426695821654,36.0666146017742,41.3145817037301,30.9227674657288,38.0199608260382,46.7696458529704,69.5347488445263,67.172965985797,55.6061122344963,50.4855281782298,48.2795692118474,39.0635210939899,33.8209017229782,37.1556535809183,30.4827226619999,37.2048623154942,39.4704416995997,34.3476274655976,29.8036100563001,64.8448897139505,85.0206201422668,64.3248351889941,66.1465388474469,40.3766251527278,41.29014459926,43.9563898241436,47.3754117764736,29.5927541380864,43.4858918815141,42.8102469951675,43.5400590213941,54.1337524382616,34.9392085083028,31.7265436903674,44.5514850152992,38.2773022740587,43.0485288534994,38.3142630696347,74.3117408702705,49.0800594283268,56.1713562931101,59.561145681732,70.849248968258,84.3841703785565,76.230627635954,53.7751499393514,66.1093571759139,58.3730559174372,66.4115765712428,67.9054828989874,58.8068666910862,59.0311905172895,56.4590659833678,65.2522357057811,72.5435880414795,57.4869476981841,59.3403697156762,61.2347507759093,71.6596737485518,66.5534273097516,69.6233674646177,62.4989591519013,60.7005503678882,62.6994244477323,58.5369513192872,61.2952427650174,60.2970265475626,71.8262107721905,71.1810108745045,65.9980031916275,49.9261872667021,66.6228417099654,64.4308080677012,70.1967724005628,52.8685435086623,32.6604002153413,37.1099364213556,44.7800580812616,51.4746595077336
|short_description=p1@Tufm
}}

Revision as of 11:48, 14 September 2013

Short description:p1@Tufm
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tufm_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000098048, ENSMUST00000106392, NM_001163713, NM_172745, uc009jro.2, uc009jrp.2, uc009jrq.2_5end
EntrezGene:Tufm
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tufm

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I556.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I641.40
CD326+ enterocyte, pool1.CNhs13542.11848-124I345.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I442.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I760.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I877.33
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E949.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E765.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F262.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E677.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F191.02
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E445.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E840.65
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A150.63
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A349.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A531.48
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A247.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A450.05
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A652.62
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A340.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H242.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I958.51
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D192.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D275.93
GP2+ M cell, pool1.CNhs13228.11845-124H958.57
GP2+ M cell, pool2.CNhs13231.11846-124I174.95
GP2+ M cell, pool3.CNhs13240.11847-124I288.99
Ileum epithelium, pool1.CNhs13199.10252-104B961.38
Ileum epithelium, pool2.CNhs13232.10253-104C158.22
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C888.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3104.78
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6131.01
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5118.72
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6129.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7102.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D837.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D934.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B338.91
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B768.07
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2117.08
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B882.82
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C371.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C474.33
Mouse Astrocytes, donor3.CNhs12107.11633-122C496.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A230.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I930.47
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A136.30
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C145.02
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E135.82
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C531.97
Mouse Granule cells, donor1.CNhs12131.11713-123C379.51
Mouse Granule cells, donor2.CNhs12357.11731-123E369.83
Mouse Granule cells, donor3.CNhs12108.11636-122C791.91
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6104.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D168.48
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C765.69
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E782.08
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D277.44
Mouse Microglia, donor1.CNhs12629.11718-123C875.80
Mouse Microglia, donor2.CNhs12634.11736-123E882.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D565.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F570.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D967.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F155.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D562.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D267.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F272.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D680.89
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F329.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.63
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D470.16
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F470.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D862.51
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E450.53
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E540.52
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I637.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D655.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F650.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E172.88
Mouse Schwann, donor1.CNhs12507.11728-123D968.08
Mouse Schwann, donor2.CNhs12573.11746-123F951.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G334.20
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7101.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C4108.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C8133.31
Mouse hepatocyte, donor6.CNhs13090.11822-124F4126.71
Mouse hepatocyte, donor8.CNhs13091.11824-124F6123.21
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A769.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E353.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I841.34
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G631.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H135.93
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G168.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G265.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G382.40
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B661.89
accessory axillary lymph node, adult.CNhs10475.1063-29H929.00
adrenal gland, adult.CNhs10508.49-24D771.55
adrenal gland, embryo E14.CNhs11038.406-44C570.26
adrenal gland, embryo E16.CNhs11004.1254-43D681.29
adrenal gland, embryo E17.CNhs11043.1263-45I185.79
adrenal gland, embryo E18.CNhs11026.1262-18F580.03
adrenal gland, neonate N00.CNhs11191.1311-23C148.33
adrenal gland, neonate N25.CNhs11223.1377-27I3105.69
amnion, adult pregnant day17.5.CNhs10488.583-22A833.12
aorta, adult.CNhs10498.46-23H175.19
bone (os femoris), adult.CNhs10483.56-12G246.88
bone (os femoris), neonate N02.CNhs11227.1985-43F541.90
bone (os femoris), neonate N16.CNhs11225.1525-43A638.65
bone (os femoris), neonate N20.CNhs11195.1350-25C337.82
cecum, adult.CNhs10467.37-13H491.33
cerebellum, adult.CNhs10494.15-8B237.48
cerebellum, neonate N30.CNhs11135.1395-42I224.92
colon, adult.CNhs10468.36-18H771.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C743.85
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D161.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D445.36
corpora quadrigemina, adult.CNhs10501.16-22A434.75
corpus striatum, adult.CNhs10487.19-21D827.45
corpus striatum, neonate N00.CNhs11226.630-43F142.97
cortex, adult.CNhs10473.12-14D535.46
cortex, neonate N30.CNhs11107.1392-42F231.45
diencephalon, adult.CNhs10482.20-12F235.12
diencephalon, neonate N30.CNhs11201.1388-42B233.75
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.90
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.34
epididymis, adult.CNhs10490.58-23B230.07
eyeball, adult.CNhs10484.31-12G431.36
eyeball, embryo E12.CNhs11016.345-16C659.47
eyeball, embryo E14.CNhs10521.399-16E251.27
eyeball, embryo E15.CNhs10593.426-16C952.04
eyeball, embryo E17.CNhs11023.1261-18D445.81
eyeball, neonate N00.CNhs11207.633-15C620.75
eyeball, neonate N01.CNhs11140.1532-43E731.90
eyeball, neonate N02.CNhs11205.1551-44G835.04
eyeball, neonate N16.CNhs11188.777-19A229.23
forelimb, embryo E11.CNhs10596.335-25E270.71
forelimb, embryo E12.CNhs10600.359-14H254.08
forelimb, embryo E13.CNhs10589.384-1E249.27
forelimb, embryo E14.CNhs10577.413-26A860.50
forelimb, embryo E15.CNhs11007.437-20E739.48
forelimb, embryo E17.CNhs10598.1517-43C436.91
forelimb, embryo E18.CNhs11008.1520-43B530.46
gonad, embryo E13.CNhs11044.1564-45I656.92
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C861.79
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D273.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D541.77
heart, embryo E11.CNhs10586.331-24E977.47
heart, embryo E12.CNhs11015.353-12F582.79
heart, embryo E13.CNhs11013.376-3I986.61
heart, embryo E14.CNhs10597.403-26D487.60
heart, embryo E15.CNhs11017.431-16C896.61
heart, embryo E16.CNhs11021.457-17C6102.43
heart, embryo E17.CNhs11025.479-18E5111.15
heart, embryo E18.CNhs11030.1283-20G3129.31
heart, neonate N00.CNhs11213.639-21E391.08
heart, neonate N03.CNhs11221.1349-25I2110.26
heart, neonate N10.CNhs11118.749-24G1111.96
heart, neonate N16.CNhs11209.782-15G1118.28
heart, neonate N20.CNhs11127.821-26I6138.89
heart, neonate N25.CNhs11196.1351-25D3143.59
heart, neonate N30.CNhs11202.1390-42D2141.86
hippocampus, adult.CNhs10478.13-16E833.02
hippocampus, neonate N00.CNhs11228.627-43G135.09
intestinal mucosa, adult.CNhs10506.860-29I333.37
intestine, adult.CNhs10496.178-9A397.05
intestine, embryo E12.CNhs11019.1251-16I562.71
intestine, embryo E13.CNhs11010.381-16D552.25
intestine, embryo E15.CNhs10602.976-16D867.78
intestine, embryo E16.CNhs10585.463-22H466.15
intestine, embryo E17.CNhs10582.482-18D370.05
intestine, embryo E18.CNhs10526.1289-20F764.49
intestine, neonate N00.CNhs11126.644-26D159.79
intestine, neonate N01.CNhs11192.1322-23E945.46
intestine, neonate N06.CNhs11102.688-20B840.97
intestine, neonate N07.CNhs11095.720-20F241.18
intestine, neonate N10.CNhs11098.755-23A539.58
intestine, neonate N20.CNhs11187.827-18D159.32
intestine, neonate N25.CNhs11121.1352-25E359.87
intestine, neonate N30.CNhs11131.1384-42G151.18
kidney, embryo E14.CNhs10606.411-4I961.07
kidney, embryo E15.CNhs10997.434-16F859.64
kidney, embryo E16.CNhs10584.464-22A542.83
kidney, embryo E17.CNhs11028.483-18I263.95
kidney, embryo E18.CNhs11001.1288-20C755.86
kidney, neonate N00.CNhs11214.646-21G744.40
kidney, neonate N10.CNhs11206.758-6D561.59
kidney, neonate N20.CNhs11113.832-19I192.11
kidney, neonate N25.CNhs11122.1353-25F392.94
kidney, neonate N30.CNhs11203.1385-42H192.18
liver, adult pregnant day01.CNhs10466.508-5B2103.76
liver, embryo E12.CNhs10601.355-15F870.24
liver, embryo E13.CNhs10524.378-3H674.69
liver, embryo E14.CNhs10594.409-16E173.98
liver, embryo E15.CNhs10520.433-16D764.71
liver, embryo E16.CNhs10523.462-17F570.66
liver, embryo E17.CNhs10510.481-18A362.64
liver, embryo E18.CNhs10579.499-43G474.51
liver, neonate N00.CNhs11117.641-24F430.64
liver, neonate N03.CNhs11123.1345-25G298.84
liver, neonate N06.CNhs11101.684-20A840.26
liver, neonate N07.CNhs11103.716-20H275.17
liver, neonate N10.CNhs11115.751-24B9100.79
liver, neonate N20.CNhs11220.823-25A3109.62
liver, neonate N25.CNhs11198.1368-26H1129.70
liver, neonate N30.CNhs11106.1382-42D185.87
lung, adult.CNhs10474.28-22B126.23
lung, embryo E12.CNhs10522.354-16G263.48
lung, embryo E14.CNhs10604.404-26F850.68
lung, embryo E15.CNhs11020.432-17C554.83
lung, embryo E16.CNhs10998.458-17B640.37
lung, embryo E17.CNhs10605.480-44A639.36
lung, embryo E18.CNhs10583.1287-20I630.71
lung, neonate N00.CNhs11224.640-42C622.64
lung, neonate N06.CNhs11212.683-20E522.38
lung, neonate N07.CNhs11111.715-19A321.04
lung, neonate N10.CNhs11219.750-23E624.87
lung, neonate N20.CNhs11109.822-18A427.86
lung, neonate N25.CNhs11119.1359-25C724.18
lung, neonate N30.CNhs11133.1394-42H221.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A140.71
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A159.29
mammary gland, adult lactating day02.CNhs10480.595-22B631.96
mammary gland, adult pregnant day19.CNhs10476.588-5H251.60
medulla oblongata, adult.CNhs10477.17-12C242.39
medulla oblongata, neonate N30.CNhs11200.1396-42A334.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C740.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C285.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E153.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E251.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E349.12
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D743.73
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D840.10
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D937.37
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D544.42
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D645.85
olfactory brain, adult.CNhs10489.18-22I932.13
ovary, adult.CNhs10507.91-2I742.72
ovary, embryo E18.CNhs11040.505-44H758.41
ovary, neonate N00.CNhs11217.1299-22I423.94
oviduct, adult pregnant day01.CNhs10500.988-6G638.77
pancreas, adult.CNhs10486.34-16E437.17
pancreas, embryo E14.CNhs11012.405-44F465.55
pancreas, embryo E15.CNhs11042.1556-45F271.95
pancreas, embryo E16.CNhs11003.460-26E545.64
pancreas, embryo E17.CNhs10599.1558-45G358.47
pancreas, embryo E18.CNhs10580.1535-43I747.96
pancreas, neonate N00.CNhs11105.645-26G922.22
pancreas, neonate N01.CNhs11138.1531-43D727.99
pancreas, neonate N02.CNhs11139.1539-43D831.37
pancreas, neonate N16.CNhs11136.787-43B633.50
pancreas, neonate N25.CNhs11094.1555-45E244.28
pancreas, neonate N30.CNhs11182.1548-44H534.03
pituitary gland, adult.CNhs10493.21-1G823.15
pituitary gland, embryo E12.CNhs11018.346-16E650.78
pituitary gland, embryo E13.CNhs11009.370-44C770.24
pituitary gland, embryo E14.CNhs11037.398-44A562.59
pituitary gland, embryo E15.CNhs10592.427-16B950.72
pituitary gland, embryo E16.CNhs11036.449-43F650.30
pituitary gland, embryo E17.CNhs11039.1265-44F545.25
pituitary gland, neonate N00.CNhs11190.1308-22E936.23
placenta, adult pregnant day10.CNhs10472.539-13I750.45
placenta, adult pregnant day17.CNhs10464.577-18G328.17
prostate, adult.CNhs10470.859-1F833.30
skin, adult.CNhs10492.30-1C329.18
skin, neonate N00.CNhs11124.650-25G418.41
skin, neonate N03.CNhs11215.662-22H334.56
skin, neonate N06.CNhs11097.693-20I535.93
skin, neonate N10.CNhs11108.762-6C432.99
small intestine, neonate N16.CNhs11114.790-21I154.51
spinal cord, adult.CNhs10505.24-13C932.08
spleen, adult.CNhs10465.25-2G245.28
spleen, embryo E16.CNhs11035.461-43C144.58
spleen, embryo E18.CNhs11011.1271-21F251.67
spleen, neonate N10.CNhs11116.752-24D131.65
spleen, neonate N20.CNhs11112.824-19H136.22
spleen, neonate N25.CNhs11099.1354-25G333.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C625.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C926.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.28
stomach, adult.CNhs10503.33-1H654.42
stomach, embryo E12.CNhs10588.356-43E356.15
stomach, embryo E15.CNhs10603.1252-16G849.61
stomach, embryo E16.CNhs11022.459-17D457.78
stomach, embryo E17.CNhs11006.1035-18D554.36
stomach, embryo E18.CNhs10999.1286-20C650.88
stomach, neonate N03.CNhs11193.1340-24B847.20
stomach, neonate N07.CNhs11210.718-18A940.42
stomach, neonate N25.CNhs11104.1355-25E454.18
stomach, neonate N30.CNhs11134.1386-42I151.46
submandibular gland, adult.CNhs10469.59-29C136.04
testis, adult.CNhs10504.57-7G557.50
testis, embryo E13.CNhs11031.389-23F553.83
testis, embryo E15.CNhs11034.443-27C566.35
testis, embryo E16.CNhs11033.470-26G559.89
testis, embryo E17.CNhs11029.486-18I570.39
testis, embryo E18.CNhs11027.503-18G552.55
testis, neonate N00.CNhs11189.1300-22B732.74
testis, neonate N07.CNhs11222.726-26I436.07
testis, neonate N10.CNhs11204.763-44D941.31
testis, neonate N20.CNhs11110.839-18H330.92
testis, neonate N30.CNhs11130.1391-42E238.02
thymus, adult.CNhs10471.38-12B546.77
thymus, embryo E14.CNhs11041.402-44I469.53
thymus, embryo E15.CNhs11005.430-45I267.17
thymus, embryo E16.CNhs11002.456-26C555.61
thymus, embryo E17.CNhs10581.478-18C150.49
thymus, embryo E18.CNhs10595.1273-19G448.28
thymus, neonate N02.CNhs11181.1541-43F839.06
thymus, neonate N03.CNhs11137.2104-43C733.82
thymus, neonate N06.CNhs11197.681-26C437.16
thymus, neonate N07.CNhs11211.713-19D330.48
thymus, neonate N10.CNhs11194.748-24E437.20
thymus, neonate N20.CNhs11186.820-7A239.47
thymus, neonate N25.CNhs11125.1362-25G734.35
thymus, neonate N30.CNhs11132.1393-42G229.80
tongue, adult.CNhs10499.32-1B464.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H385.02
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F764.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G566.15
urinary bladder, adult.CNhs10481.879-12E440.38
uterus, adult pregnant day19.CNhs10497.590-15F541.29
uterus, adult.CNhs10509.92-27E543.96
vagina, adult.CNhs10502.89-27D547.38
vesicular gland, adult.CNhs10491.51-27F829.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A143.49
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A242.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A343.54
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.13
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.94
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A644.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.28
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A938.31
whole body, embryo E11.CNhs11014.324-5I874.31
whole body, embryo E12.CNhs10587.857-27C949.08
whole body, embryo E13.CNhs10512.372-23H256.17
whole body, embryo E14.5.CNhs10578.420-27D259.56
whole body, embryo E14.CNhs10519.395-14B170.85
whole body, embryo E16.CNhs10514.453-14F284.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G576.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G553.78
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G566.11
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G558.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G566.41
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G567.91
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G558.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G559.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G556.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G565.25
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G572.54
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G557.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G559.34
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G561.23
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G571.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G566.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G569.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G562.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G560.70
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G562.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G558.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G561.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G560.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G571.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G571.18
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G566.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G549.93
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G566.62
whole body, embryo E17.5.CNhs10513.490-9F964.43
whole body, embryo E17.CNhs10517.475-3I570.20
whole body, embryo E18.CNhs10516.493-3B352.87
whole body, neonate N00.CNhs10525.657-19C232.66
whole body, neonate N01.CNhs10576.659-23C637.11
whole body, neonate N06.CNhs10515.692-21D144.78
whole body, neonate N10.CNhs10518.761-6B451.47





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube7.84e-0947
digestive tract diverticulum3.28e-0723
sac3.28e-0723
primary circulatory organ4.97e-0718
heart4.97e-0718
primitive heart tube4.97e-0718
primary heart field4.97e-0718
anterior lateral plate mesoderm4.97e-0718
heart tube4.97e-0718
heart primordium4.97e-0718
cardiac mesoderm4.97e-0718
cardiogenic plate4.97e-0718
heart rudiment4.97e-0718
liver9.30e-0722
epithelial sac9.30e-0722
digestive gland9.30e-0722
epithelium of foregut-midgut junction9.30e-0722
anatomical boundary9.30e-0722
hepatobiliary system9.30e-0722
foregut-midgut junction9.30e-0722
hepatic diverticulum9.30e-0722
liver primordium9.30e-0722
septum transversum9.30e-0722
liver bud9.30e-0722







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