FFCP PHASE1:Mm9::chr4:6202776..6202781,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13122|HGNC=|MCL_coexpression_id=8|UniProt=Q64505|association_with_transcript=0bp_to_ENSMUST00000029905,ENSMUST00000147346,NM_007824,uc008rxk.1_5end|description=CAGE_peak_1_at_Cyp7a1_5end|id=chr4:6202776..6202781,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.05e-20!22;UBERON:0007499!4.05e-20!22;UBERON:0006925!4.05e-20!22;UBERON:0009497!4.05e-20!22;UBERON:0000015!4.05e-20!22;UBERON:0002423!4.05e-20!22;UBERON:0006235!4.05e-20!22;UBERON:0008835!4.05e-20!22;UBERON:0003894!4.05e-20!22;UBERON:0004161!4.05e-20!22;UBERON:0008836!4.05e-20!22;UBERON:0009854!7.44e-19!23;UBERON:0009856!7.44e-19!23;UBERON:0002365!1.22e-16!25;UBERON:0002330!1.22e-16!25;UBERON:0005172!2.96e-15!49;UBERON:0005173!2.96e-15!49;UBERON:0002417!2.96e-15!49;UBERON:0000916!2.96e-15!49;UBERON:0005177!4.33e-11!85;UBERON:0005256!8.67e-11!47;UBERON:0009569!2.04e-10!66;UBERON:0002100!2.22e-08!98;UBERON:0000466!2.21e-07!79;UBERON:0003914!5.36e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.10e-20,22;UBERON:0007499,2.10e-20,22;UBERON:0006925,2.10e-20,22;UBERON:0009497,2.10e-20,22;UBERON:0000015,2.10e-20,22;UBERON:0002423,2.10e-20,22;UBERON:0006235,2.10e-20,22;UBERON:0008835,2.10e-20,22;UBERON:0003894,2.10e-20,22;UBERON:0004161,2.10e-20,22;UBERON:0008836,2.10e-20,22;UBERON:0009854,2.92e-19,23;UBERON:0009856,2.92e-19,23;UBERON:0002365,2.97e-17,25;UBERON:0002330,2.97e-17,25;UBERON:0005256,3.71e-12,45;UBERON:0005172,1.28e-10,49;UBERON:0005173,1.28e-10,49;UBERON:0002417,1.28e-10,49;UBERON:0000916,1.28e-10,49;UBERON:0002368,1.67e-07,60;UBERON:0003104,2.79e-07,61;UBERON:0009142,2.79e-07,61;UBERON:0009569,6.15e-07,66|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0.579728977403356,77.4381489283248,19.039197343817,112.797967052304,408.709366574584,1029.56578654968,171.763525821133,0,0,0,0,0,0,0,0,0,0,106.647743657602,0,1.92974780784272,0,0,1.15307748628029,4.82312449768392,10.5829836422134,1.50799909595611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0,0,0,0,0,0.90422890701429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,1.14135375667535,0,0,1.00534083520108,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.561086559122548,0.0632365371242573,0.147610147979602,0,0.123397163921801,846.37225033381,0.500535317148282,0.786235980452812,0.449724224769707,3.04290182082754,7.23531479257251,43.7956465064042,139.820322801094,181.753589214815,65.0710549255753,47.443508154027,56.193283097944,105.780771185836,607.957359218698,217.429665188558,623.31702960147,0,0,0,0,0,0,1.90434912708811,0.585400943573396,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,1.26203287766503,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.283880170416537,1.42452482933804,0.325773918707152,0.164970122972535,0,0,0,0,0,0.614870295887855,1.55056975900933,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,1.74690050996942,3.37160865962052,10.7449492442937,0,0,0,0,0,0,0,0,0,0.117357238645754,1.69265700297135,0,0.241584120826006,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,3.49302666055027,10.0011027510727,9.27157757575024,7.70206103020357,8.84440241173291,10.1391719956096,10.3744487762342,9.45779225445812,9.09157164149144,8.50044940543076,10.0021675169445,7.06894388263618,7.7163688185482,10.3021475200827,11.9231125308862,9.60033906679163,10.2935967572416,8.10683045820891,10.174249164263,10.9166881281784,8.37684618127597,8.23175877927476,9.2074399003245,8.55565917228929,9.53941861818155,7.82991119619549,8.76689893142515,8.18462086339379,6.66228417099654,8.10207766120794,0,30.8789723147939,31.5860449450999,0.765153328275374,0,0.231867835620421|short_description=p1@Cyp7a1}} | ||
|EntrezGene=13122 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q64505 | |||
|association_with_transcript=0bp_to_ENSMUST00000029905,ENSMUST00000147346,NM_007824,uc008rxk.1_5end | |||
|description=CAGE_peak_1_at_Cyp7a1_5end | |||
|id=chr4:6202776..6202781,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.05e-20!22;UBERON:0007499!4.05e-20!22;UBERON:0006925!4.05e-20!22;UBERON:0009497!4.05e-20!22;UBERON:0000015!4.05e-20!22;UBERON:0002423!4.05e-20!22;UBERON:0006235!4.05e-20!22;UBERON:0008835!4.05e-20!22;UBERON:0003894!4.05e-20!22;UBERON:0004161!4.05e-20!22;UBERON:0008836!4.05e-20!22;UBERON:0009854!7.44e-19!23;UBERON:0009856!7.44e-19!23;UBERON:0002365!1.22e-16!25;UBERON:0002330!1.22e-16!25;UBERON:0005172!2.96e-15!49;UBERON:0005173!2.96e-15!49;UBERON:0002417!2.96e-15!49;UBERON:0000916!2.96e-15!49;UBERON:0005177!4.33e-11!85;UBERON:0005256!8.67e-11!47;UBERON:0009569!2.04e-10!66;UBERON:0002100!2.22e-08!98;UBERON:0000466!2.21e-07!79;UBERON:0003914!5.36e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.10e-20,22;UBERON:0007499,2.10e-20,22;UBERON:0006925,2.10e-20,22;UBERON:0009497,2.10e-20,22;UBERON:0000015,2.10e-20,22;UBERON:0002423,2.10e-20,22;UBERON:0006235,2.10e-20,22;UBERON:0008835,2.10e-20,22;UBERON:0003894,2.10e-20,22;UBERON:0004161,2.10e-20,22;UBERON:0008836,2.10e-20,22;UBERON:0009854,2.92e-19,23;UBERON:0009856,2.92e-19,23;UBERON:0002365,2.97e-17,25;UBERON:0002330,2.97e-17,25;UBERON:0005256,3.71e-12,45;UBERON:0005172,1.28e-10,49;UBERON:0005173,1.28e-10,49;UBERON:0002417,1.28e-10,49;UBERON:0000916,1.28e-10,49;UBERON:0002368,1.67e-07,60;UBERON:0003104,2.79e-07,61;UBERON:0009142,2.79e-07,61;UBERON:0009569,6.15e-07,66 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0.579728977403356,77.4381489283248,19.039197343817,112.797967052304,408.709366574584,1029.56578654968,171.763525821133,0,0,0,0,0,0,0,0,0,0,106.647743657602,0,1.92974780784272,0,0,1.15307748628029,4.82312449768392,10.5829836422134,1.50799909595611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0,0,0,0,0,0,0.90422890701429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,1.14135375667535,0,0,1.00534083520108,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.561086559122548,0.0632365371242573,0.147610147979602,0,0.123397163921801,846.37225033381,0.500535317148282,0.786235980452812,0.449724224769707,3.04290182082754,7.23531479257251,43.7956465064042,139.820322801094,181.753589214815,65.0710549255753,47.443508154027,56.193283097944,105.780771185836,607.957359218698,217.429665188558,623.31702960147,0,0,0,0,0,0,1.90434912708811,0.585400943573396,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,1.26203287766503,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0.283880170416537,1.42452482933804,0.325773918707152,0.164970122972535,0,0,0,0,0,0.614870295887855,1.55056975900933,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,1.74690050996942,3.37160865962052,10.7449492442937,0,0,0,0,0,0,0,0,0,0.117357238645754,1.69265700297135,0,0.241584120826006,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,3.49302666055027,10.0011027510727,9.27157757575024,7.70206103020357,8.84440241173291,10.1391719956096,10.3744487762342,9.45779225445812,9.09157164149144,8.50044940543076,10.0021675169445,7.06894388263618,7.7163688185482,10.3021475200827,11.9231125308862,9.60033906679163,10.2935967572416,8.10683045820891,10.174249164263,10.9166881281784,8.37684618127597,8.23175877927476,9.2074399003245,8.55565917228929,9.53941861818155,7.82991119619549,8.76689893142515,8.18462086339379,6.66228417099654,8.10207766120794,0,30.8789723147939,31.5860449450999,0.765153328275374,0,0.231867835620421 | |||
|short_description=p1@Cyp7a1 | |||
}} |
Revision as of 05:20, 14 September 2013
Short description: | p1@Cyp7a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cyp7a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000029905, ENSMUST00000147346, NM_007824, uc008rxk.1_5end |
EntrezGene: | Cyp7a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 2.10e-20 | 22 |
epithelial sac | 2.10e-20 | 22 |
digestive gland | 2.10e-20 | 22 |
epithelium of foregut-midgut junction | 2.10e-20 | 22 |
anatomical boundary | 2.10e-20 | 22 |
hepatobiliary system | 2.10e-20 | 22 |
foregut-midgut junction | 2.10e-20 | 22 |
hepatic diverticulum | 2.10e-20 | 22 |
liver primordium | 2.10e-20 | 22 |
septum transversum | 2.10e-20 | 22 |
liver bud | 2.10e-20 | 22 |
digestive tract diverticulum | 2.92e-19 | 23 |
sac | 2.92e-19 | 23 |
exocrine gland | 2.97e-17 | 25 |
exocrine system | 2.97e-17 | 25 |
trunk mesenchyme | 3.71e-12 | 45 |
abdomen element | 1.28e-10 | 49 |
abdominal segment element | 1.28e-10 | 49 |
abdominal segment of trunk | 1.28e-10 | 49 |
abdomen | 1.28e-10 | 49 |
endocrine gland | 1.67e-07 | 60 |
mesenchyme | 2.79e-07 | 61 |
entire embryonic mesenchyme | 2.79e-07 | 61 |
subdivision of trunk | 6.15e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.