FFCP PHASE1:Mm9::chr15:101520635..101520643,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=109|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:101520635..101520643,-|id=chr15:101520635..101520643,-|ontology_enrichment_celltype=CL:0000068!1.37e-17!3;CL:0002202!1.37e-17!3;CL:0000069!1.37e-17!3;CL:0002632!1.37e-17!3;CL:0002368!1.37e-17!3;CL:0000307!1.37e-17!3;CL:0000377!1.37e-17!3|ontology_enrichment_celltype_v019_2=CL:0000068,1.12e-15,3;CL:0002202,1.12e-15,3;CL:0000069,1.12e-15,3;CL:0002632,1.12e-15,3;CL:0002368,1.12e-15,3;CL:0000307,1.12e-15,3;CL:0000377,1.12e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003126!1.37e-17!3;UBERON:0001005!1.37e-17!3;UBERON:0007196!1.37e-17!3;UBERON:0001558!1.37e-17!3;UBERON:0000996!2.75e-07!1;UBERON:0000305!6.93e-07!1;UBERON:0001723!8.98e-07!1;UBERON:0001033!8.98e-07!1;UBERON:0010056!8.98e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000996,2.74e-44,1;UBERON:0000162,8.02e-16,3;UBERON:0001353,8.02e-16,3;UBERON:0000163,8.02e-16,3;UBERON:0006866,8.02e-16,3;UBERON:0001046,8.02e-16,3;UBERON:0000164,8.02e-16,3;UBERON:0000931,8.02e-16,3;UBERON:0003126,1.12e-15,3;UBERON:0001005,1.12e-15,3;UBERON:0007196,1.12e-15,3;UBERON:0001558,1.12e-15,3;UBERON:0000161,4.56e-10,5;UBERON:0003975,4.56e-10,5;UBERON:0004122,4.56e-10,5;UBERON:0003134,8.61e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,10.9327873330324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr15:101520635..101520643,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=109 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:101520635..101520643,- | |||
|id=chr15:101520635..101520643,- | |||
|ontology_enrichment_celltype=CL:0000068!1.37e-17!3;CL:0002202!1.37e-17!3;CL:0000069!1.37e-17!3;CL:0002632!1.37e-17!3;CL:0002368!1.37e-17!3;CL:0000307!1.37e-17!3;CL:0000377!1.37e-17!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.12e-15,3;CL:0002202,1.12e-15,3;CL:0000069,1.12e-15,3;CL:0002632,1.12e-15,3;CL:0002368,1.12e-15,3;CL:0000307,1.12e-15,3;CL:0000377,1.12e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!1.37e-17!3;UBERON:0001005!1.37e-17!3;UBERON:0007196!1.37e-17!3;UBERON:0001558!1.37e-17!3;UBERON:0000996!2.75e-07!1;UBERON:0000305!6.93e-07!1;UBERON:0001723!8.98e-07!1;UBERON:0001033!8.98e-07!1;UBERON:0010056!8.98e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,2.74e-44,1;UBERON:0000162,8.02e-16,3;UBERON:0001353,8.02e-16,3;UBERON:0000163,8.02e-16,3;UBERON:0006866,8.02e-16,3;UBERON:0001046,8.02e-16,3;UBERON:0000164,8.02e-16,3;UBERON:0000931,8.02e-16,3;UBERON:0003126,1.12e-15,3;UBERON:0001005,1.12e-15,3;UBERON:0007196,1.12e-15,3;UBERON:0001558,1.12e-15,3;UBERON:0000161,4.56e-10,5;UBERON:0003975,4.56e-10,5;UBERON:0004122,4.56e-10,5;UBERON:0003134,8.61e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,10.9327873330324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr15:101520635..101520643,- | |||
}} |
Revision as of 03:26, 13 September 2013
Short description: | p@chr15:101520635..101520643, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:101520635..101520643, - |
Coexpression cluster: | MCL_coexpression_mm9:109 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.12e-15 | 3 |
epithelial cell of tracheobronchial tree | 1.12e-15 | 3 |
branched duct epithelial cell | 1.12e-15 | 3 |
epithelial cell of lower respiratory tract | 1.12e-15 | 3 |
respiratory epithelial cell | 1.12e-15 | 3 |
tracheal epithelial cell | 1.12e-15 | 3 |
tracheoblast | 1.12e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
vagina | 2.74e-44 | 1 |
cloaca | 8.02e-16 | 3 |
anal region | 8.02e-16 | 3 |
embryonic cloaca | 8.02e-16 | 3 |
terminal part of digestive tract | 8.02e-16 | 3 |
hindgut | 8.02e-16 | 3 |
primitive urogenital sinus | 8.02e-16 | 3 |
proctodeum | 8.02e-16 | 3 |
trachea | 1.12e-15 | 3 |
respiratory airway | 1.12e-15 | 3 |
tracheobronchial tree | 1.12e-15 | 3 |
lower respiratory tract | 1.12e-15 | 3 |
orifice | 4.56e-10 | 5 |
internal female genitalia | 4.56e-10 | 5 |
genitourinary system | 4.56e-10 | 5 |
female reproductive organ | 8.61e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.