FFCP PHASE1:Mm9::chr6:29644182..29644194,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=232670|HGNC=|MCL_coexpression_id=15|UniProt=Q8R3S2|association_with_transcript=-27bp_to_ENSMUST00000046750_5end|description=CAGE_peak_2_at_Tspan33_5end|id=chr6:29644182..29644194,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.08e-09!73;UBERON:0005743!1.08e-09!73;UBERON:0001049!2.13e-09!52;UBERON:0005068!2.13e-09!52;UBERON:0006241!2.13e-09!52;UBERON:0007135!2.13e-09!52;UBERON:0005172!4.16e-09!49;UBERON:0005173!4.16e-09!49;UBERON:0002417!4.16e-09!49;UBERON:0000916!4.16e-09!49;UBERON:0000073!7.55e-09!75;UBERON:0001016!7.55e-09!75;UBERON:0000955!9.56e-09!50;UBERON:0006238!9.56e-09!50;UBERON:0002616!2.19e-08!49;UBERON:0000033!4.86e-08!63;UBERON:0002346!3.03e-07!71;UBERON:0003075!3.03e-07!71;UBERON:0007284!3.03e-07!71;UBERON:0002020!6.44e-07!34;UBERON:0003080!9.28e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.24e-10,49;UBERON:0005173,5.24e-10,49;UBERON:0002417,5.24e-10,49;UBERON:0000916,5.24e-10,49;UBERON:0000073,1.39e-09,54;UBERON:0001017,1.46e-08,73;UBERON:0001049,1.47e-08,52;UBERON:0005068,1.47e-08,52;UBERON:0006241,1.47e-08,52;UBERON:0007135,1.47e-08,52;UBERON:0001016,6.08e-08,75|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,11.3257319017325,20.0450514715928,44.0723983220732,0.157731082679119,0.274228867211478,0,1.36069264241712,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,5.08024538767705,9.84103660135312,0,0.577703239502549,0.332469290716985,0.204169356262369,1.25559489221072,0,0,0,0.683045484958446,0.485510353031154,0,0,0,0,1.74420125104357,1.75748946187577,2.3331587888914,0.979904951377538,2.87505128729943,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0.338844532069132,0,0.899899717281399,0.988866362566974,0.7104801149461,5.09320187881288,6.91592949578798,0.414758449233911,0.405017814995072,0.841299845405528,3.71346279724945,2.42955395046775,0.367472397644862,0.670918297127655,0,2.20231761998777,4.46905683298157,3.99376986466233,0.791317726381163,1.37231465403614,0.52091337055676,2.79182999001381,6.75315132038016,5.80633341551878,2.65165726926301,3.98640706237488,2.05039390407831,0.075726193333184,0.151143120213571,0.869593466105033,1.72084775396277,0,0.539703191637817,0.649776417447669,1.34408066129201,1.40444420131752,0,0,0,1.40843419776681,0,0,0,1.08245520505607,0.506719730950197,1.51657333504435,1.37020655662872,0,0.29688427812965,1.73485326766136,1.52232739156071,0.230615497256059,0.452167921657868,0.705532242814229,0.125666591329675,0.247194967734374,0.289198713839823,5.30766331169925,1.7794353494215,4.85851340612866,5.81850303762267,0,1.17112318804619,2.51336048176146,0,0.359445373517761,0,0.508280908292259,1.9472783122627,0.915001205637253,0.251308704225729,1.21677024134594,3.3243009452943,2.70124457927428,3.56930778749067,0.81471491080253,2.98576729464223,1.51633655060205,0.631325567659422,0.390361328888111,0.919608417733892,0.360124259610698,0.90422890701429,1.02054748726992,1.0249097622788,1.49922759295566,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0,0,1.19420560091096,0,0,0.284163499395593,1.03562886267751,0.703578179943289,0.720248245844059,0.473489471170421,0.393528463494808,0.154267112887378,0,0.536546802799238,0.350296027101508,0.329119699826961,0,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,5.67782861123144,1.9551876352064,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0.667134131534611,1.14135375667535,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0.216138049874694,0.597423819763102,0,1.14248512609729,3.38123207019241,1.22190796707189,1.16371492300575,1.26244475802573,2.27651533647326,1.91893192373483,2.82597710114475,3.33172342588861,1.48226313543574,10.67808676583,8.64859578498093,10.1187950573184,13.7944882544182,13.5059209461353,12.9859184408524,7.76779571117189,6.32327384422638,6.31491250332587,2.87536413054709,2.60498663367952,1.24815069245824,1.01031551178845,0.717589654087649,1.92977408545347,0.369506380333209,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0.714130922658041,1.17080188714679,0.315270288212382,0.221464689648775,0,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0.983528546038072,1.10374698521893,1.12385412991454,2.10981035865966,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,2.57057053137446,0.425820255624806,1.06839362200353,2.60619134965722,1.31976098378028,0,0.242780636154981,1.209294227859,0.188605079755898,0.590603785761546,0.614870295887855,1.29214146584111,1.09060118843252,1.06949213515416,0.316036757935816,1.05418608574999,0,0.680879211507576,1.44048875225048,1.94038025674132,0.643011105094777,0.709360934569094,1.07021290561242,1.15184314421485,2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| ||
|EntrezGene=232670 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=Q8R3S2 | |||
|association_with_transcript=-27bp_to_ENSMUST00000046750_5end | |||
|description=CAGE_peak_2_at_Tspan33_5end | |||
|id=chr6:29644182..29644194,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-09!73;UBERON:0005743!1.08e-09!73;UBERON:0001049!2.13e-09!52;UBERON:0005068!2.13e-09!52;UBERON:0006241!2.13e-09!52;UBERON:0007135!2.13e-09!52;UBERON:0005172!4.16e-09!49;UBERON:0005173!4.16e-09!49;UBERON:0002417!4.16e-09!49;UBERON:0000916!4.16e-09!49;UBERON:0000073!7.55e-09!75;UBERON:0001016!7.55e-09!75;UBERON:0000955!9.56e-09!50;UBERON:0006238!9.56e-09!50;UBERON:0002616!2.19e-08!49;UBERON:0000033!4.86e-08!63;UBERON:0002346!3.03e-07!71;UBERON:0003075!3.03e-07!71;UBERON:0007284!3.03e-07!71;UBERON:0002020!6.44e-07!34;UBERON:0003080!9.28e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.24e-10,49;UBERON:0005173,5.24e-10,49;UBERON:0002417,5.24e-10,49;UBERON:0000916,5.24e-10,49;UBERON:0000073,1.39e-09,54;UBERON:0001017,1.46e-08,73;UBERON:0001049,1.47e-08,52;UBERON:0005068,1.47e-08,52;UBERON:0006241,1.47e-08,52;UBERON:0007135,1.47e-08,52;UBERON:0001016,6.08e-08,75 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,11.3257319017325,20.0450514715928,44.0723983220732,0.157731082679119,0.274228867211478,0,1.36069264241712,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,5.08024538767705,9.84103660135312,0,0.577703239502549,0.332469290716985,0.204169356262369,1.25559489221072,0,0,0,0.683045484958446,0.485510353031154,0,0,0,0,1.74420125104357,1.75748946187577,2.3331587888914,0.979904951377538,2.87505128729943,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0.338844532069132,0,0.899899717281399,0.988866362566974,0.7104801149461,5.09320187881288,6.91592949578798,0.414758449233911,0.405017814995072,0.841299845405528,3.71346279724945,2.42955395046775,0.367472397644862,0.670918297127655,0,2.20231761998777,4.46905683298157,3.99376986466233,0.791317726381163,1.37231465403614,0.52091337055676,2.79182999001381,6.75315132038016,5.80633341551878,2.65165726926301,3.98640706237488,2.05039390407831,0.075726193333184,0.151143120213571,0.869593466105033,1.72084775396277,0,0.539703191637817,0.649776417447669,1.34408066129201,1.40444420131752,0,0,0,1.40843419776681,0,0,0,1.08245520505607,0.506719730950197,1.51657333504435,1.37020655662872,0,0.29688427812965,1.73485326766136,1.52232739156071,0.230615497256059,0.452167921657868,0.705532242814229,0.125666591329675,0.247194967734374,0.289198713839823,5.30766331169925,1.7794353494215,4.85851340612866,5.81850303762267,0,1.17112318804619,2.51336048176146,0,0.359445373517761,0,0.508280908292259,1.9472783122627,0.915001205637253,0.251308704225729,1.21677024134594,3.3243009452943,2.70124457927428,3.56930778749067,0.81471491080253,2.98576729464223,1.51633655060205,0.631325567659422,0.390361328888111,0.919608417733892,0.360124259610698,0.90422890701429,1.02054748726992,1.0249097622788,1.49922759295566,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0,0,1.19420560091096,0,0,0.284163499395593,1.03562886267751,0.703578179943289,0.720248245844059,0.473489471170421,0.393528463494808,0.154267112887378,0,0.536546802799238,0.350296027101508,0.329119699826961,0,0.243206428637567,0.292399974850665,0.219550115291051,0.134206418760372,5.67782861123144,1.9551876352064,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0.667134131534611,1.14135375667535,0,0,0.502670417600539,0.397912944082302,0.19496408711912,0,0.216138049874694,0.597423819763102,0,1.14248512609729,3.38123207019241,1.22190796707189,1.16371492300575,1.26244475802573,2.27651533647326,1.91893192373483,2.82597710114475,3.33172342588861,1.48226313543574,10.67808676583,8.64859578498093,10.1187950573184,13.7944882544182,13.5059209461353,12.9859184408524,7.76779571117189,6.32327384422638,6.31491250332587,2.87536413054709,2.60498663367952,1.24815069245824,1.01031551178845,0.717589654087649,1.92977408545347,0.369506380333209,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.502518772325447,0.714130922658041,1.17080188714679,0.315270288212382,0.221464689648775,0,0.327726629431476,0.518054945597687,0.289298117163023,0,0,0.983528546038072,1.10374698521893,1.12385412991454,2.10981035865966,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.876767573733936,0,2.57057053137446,0.425820255624806,1.06839362200353,2.60619134965722,1.31976098378028,0,0.242780636154981,1.209294227859,0.188605079755898,0.590603785761546,0.614870295887855,1.29214146584111,1.09060118843252,1.06949213515416,0.316036757935816,1.05418608574999,0,0.680879211507576,1.44048875225048,1.94038025674132,0.643011105094777,0.709360934569094,1.07021290561242,1.15184314421485,2.43571959291679,1.64270195644597,2.54198485036584,0.220528398054962,0.16488625294148,0,0.241251699712623,0.358117032009409,0.164140899745061,0.291480836629851,2.22510362412612,14.0114122254239,1.23832120777933,3.51869602002452,17.5182665014363,14.8996708215917,18.9885883761414,0.339956859987711,0.419854356970974,0.276399947608848,0.954670618015114,0.316335993581135,1.01659733563424,0.324016022465404,0.627264888043406,0,0,0.743881101528023,1.04702376793612,0.129614973291793,1.24267862617385,1.69107881605257,0.448549638131936,0.496375471371293,0.583353565032143,0.516639293910924,0.506868376472335,0.234714477291508,0.911430693907651,2.41176492179135,0.966336483304024,0.864090018773596,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0.358053391334963,0,0.120195449519969,0.295379054349154,0.302899349844443,0,0.302478555410522,0.194915761479505,0.192423683280659,0,0,1.55390167361845,0.897138566094757,1.17519231454855,0,0.750729901804728,1.83151624267265,0.428736758158132,0,1.6942555278512,0.920650473014354,2.29158205375759,4.1244763762485,6.16574267793578,3.0215755895588,3.37511250115903,3.15224842256954,2.26571204492102,4.65984280576638,0.518936737920883,2.39414924040619,1.87806966329548,3.8897074730927,2.72497111416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| |||
|short_description=p2@Tspan33 | |||
}} |
Revision as of 09:34, 14 September 2013
Short description: | p2@Tspan33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tspan33_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -27bp_to_ENSMUST00000046750_5end |
EntrezGene: | Tspan33 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 5.24e-10 | 49 |
abdominal segment element | 5.24e-10 | 49 |
abdominal segment of trunk | 5.24e-10 | 49 |
abdomen | 5.24e-10 | 49 |
regional part of nervous system | 1.39e-09 | 54 |
central nervous system | 1.46e-08 | 73 |
neural tube | 1.47e-08 | 52 |
neural rod | 1.47e-08 | 52 |
future spinal cord | 1.47e-08 | 52 |
neural keel | 1.47e-08 | 52 |
nervous system | 6.08e-08 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.