FFCP PHASE1:Mm9::chr15:82451361..82451377,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=223706|HGNC=|MCL_coexpression_id=1309|UniProt=D3Z5Z8,D3Z5X1|association_with_transcript=-24bp_to_ENSMUST00000035410,ENSMUST00000109515,NM_145474,uc007wzi.1_5end|description=CAGE_peak_1_at_Cyp2d34_5end|id=chr15:82451361..82451377,-|ontology_enrichment_celltype=CL:0000181!9.46e-12!5;CL:0000417!9.46e-12!5;CL:0000668!9.46e-12!5;CL:0000412!9.46e-12!5;CL:0000182!9.46e-12!5;CL:0000066!1.46e-11!25;CL:0000473!1.12e-10!3;CL:0000627!1.12e-10!3;CL:0000682!1.12e-10!3;CL:0000223!2.91e-07!20|ontology_enrichment_celltype_v019_2=CL:0000182,6.49e-32,5;CL:0000066,5.64e-10,25;CL:0000223,2.70e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009854!1.07e-18!23;UBERON:0009856!1.07e-18!23;UBERON:0002107!3.02e-16!22;UBERON:0007499!3.02e-16!22;UBERON:0006925!3.02e-16!22;UBERON:0009497!3.02e-16!22;UBERON:0000015!3.02e-16!22;UBERON:0002423!3.02e-16!22;UBERON:0006235!3.02e-16!22;UBERON:0008835!3.02e-16!22;UBERON:0003894!3.02e-16!22;UBERON:0004161!3.02e-16!22;UBERON:0008836!3.02e-16!22;UBERON:0002365!4.80e-14!25;UBERON:0002330!4.80e-14!25;UBERON:0003929!8.96e-09!55;UBERON:0004921!3.05e-08!126;UBERON:0004185!3.05e-08!126;UBERON:0001007!4.80e-08!128;UBERON:0001555!4.80e-08!128;UBERON:0007026!4.80e-08!128;UBERON:0004119!7.45e-08!130;UBERON:0000925!7.45e-08!130;UBERON:0006595!7.45e-08!130;UBERON:0000490!7.39e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.11e-15,23;UBERON:0009856,2.11e-15,23;UBERON:0001153,1.83e-11,1;UBERON:0001045,1.83e-11,1;UBERON:0002107,2.70e-11,22;UBERON:0007499,2.70e-11,22;UBERON:0006925,2.70e-11,22;UBERON:0009497,2.70e-11,22;UBERON:0000015,2.70e-11,22;UBERON:0002423,2.70e-11,22;UBERON:0006235,2.70e-11,22;UBERON:0008835,2.70e-11,22;UBERON:0003894,2.70e-11,22;UBERON:0004161,2.70e-11,22;UBERON:0008836,2.70e-11,22;UBERON:0002365,5.89e-10,25;UBERON:0002330,5.89e-10,25|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,2.719885334831,5.93673510801599,5.19821133958135,6.2723764193627,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9113408974498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754005626400808,0.596869416123452,0.19496408711912,0,2.37751854862164,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Cyp2d34}} | ||
|EntrezGene=223706 | |||
|HGNC= | |||
|MCL_coexpression_id=1309 | |||
|UniProt=D3Z5Z8,D3Z5X1 | |||
|association_with_transcript=-24bp_to_ENSMUST00000035410,ENSMUST00000109515,NM_145474,uc007wzi.1_5end | |||
|description=CAGE_peak_1_at_Cyp2d34_5end | |||
|id=chr15:82451361..82451377,- | |||
|ontology_enrichment_celltype=CL:0000181!9.46e-12!5;CL:0000417!9.46e-12!5;CL:0000668!9.46e-12!5;CL:0000412!9.46e-12!5;CL:0000182!9.46e-12!5;CL:0000066!1.46e-11!25;CL:0000473!1.12e-10!3;CL:0000627!1.12e-10!3;CL:0000682!1.12e-10!3;CL:0000223!2.91e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.49e-32,5;CL:0000066,5.64e-10,25;CL:0000223,2.70e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!1.07e-18!23;UBERON:0009856!1.07e-18!23;UBERON:0002107!3.02e-16!22;UBERON:0007499!3.02e-16!22;UBERON:0006925!3.02e-16!22;UBERON:0009497!3.02e-16!22;UBERON:0000015!3.02e-16!22;UBERON:0002423!3.02e-16!22;UBERON:0006235!3.02e-16!22;UBERON:0008835!3.02e-16!22;UBERON:0003894!3.02e-16!22;UBERON:0004161!3.02e-16!22;UBERON:0008836!3.02e-16!22;UBERON:0002365!4.80e-14!25;UBERON:0002330!4.80e-14!25;UBERON:0003929!8.96e-09!55;UBERON:0004921!3.05e-08!126;UBERON:0004185!3.05e-08!126;UBERON:0001007!4.80e-08!128;UBERON:0001555!4.80e-08!128;UBERON:0007026!4.80e-08!128;UBERON:0004119!7.45e-08!130;UBERON:0000925!7.45e-08!130;UBERON:0006595!7.45e-08!130;UBERON:0000490!7.39e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.11e-15,23;UBERON:0009856,2.11e-15,23;UBERON:0001153,1.83e-11,1;UBERON:0001045,1.83e-11,1;UBERON:0002107,2.70e-11,22;UBERON:0007499,2.70e-11,22;UBERON:0006925,2.70e-11,22;UBERON:0009497,2.70e-11,22;UBERON:0000015,2.70e-11,22;UBERON:0002423,2.70e-11,22;UBERON:0006235,2.70e-11,22;UBERON:0008835,2.70e-11,22;UBERON:0003894,2.70e-11,22;UBERON:0004161,2.70e-11,22;UBERON:0008836,2.70e-11,22;UBERON:0002365,5.89e-10,25;UBERON:0002330,5.89e-10,25 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14846392823004,0.86152399231815,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,2.719885334831,5.93673510801599,5.19821133958135,6.2723764193627,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9113408974498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754005626400808,0.596869416123452,0.19496408711912,0,2.37751854862164,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Cyp2d34 | |||
}} |
Revision as of 11:21, 13 September 2013
Short description: | p1@Cyp2d34 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cyp2d34_5end |
Coexpression cluster: | MCL_coexpression_mm9:1309 |
Association with transcript: | -24bp_to_ENSMUST00000035410, ENSMUST00000109515, NM_145474, uc007wzi.1_5end |
EntrezGene: | Cyp2d34 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.49e-32 | 5 |
epithelial cell | 5.64e-10 | 25 |
endodermal cell | 2.70e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 2.11e-15 | 23 |
sac | 2.11e-15 | 23 |
caecum | 1.83e-11 | 1 |
midgut | 1.83e-11 | 1 |
liver | 2.70e-11 | 22 |
epithelial sac | 2.70e-11 | 22 |
digestive gland | 2.70e-11 | 22 |
epithelium of foregut-midgut junction | 2.70e-11 | 22 |
anatomical boundary | 2.70e-11 | 22 |
hepatobiliary system | 2.70e-11 | 22 |
foregut-midgut junction | 2.70e-11 | 22 |
hepatic diverticulum | 2.70e-11 | 22 |
liver primordium | 2.70e-11 | 22 |
septum transversum | 2.70e-11 | 22 |
liver bud | 2.70e-11 | 22 |
exocrine gland | 5.89e-10 | 25 |
exocrine system | 5.89e-10 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.