FFCP PHASE1:Mm9::chr9:40792571..40792583,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54698|HGNC=|MCL_coexpression_id=30|UniProt=Q149L7|association_with_transcript=-21bp_to_uc009pad.1_5end|description=CAGE_peak_2_at_Crtam_5end|id=chr9:40792571..40792583,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,7.15e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004733!1.58e-19!6;UBERON:0004732!1.58e-19!6;UBERON:0002028!1.58e-19!6;UBERON:0007277!1.58e-19!6;UBERON:0002037!8.72e-14!4;UBERON:0002680!8.72e-14!4;UBERON:0001895!8.72e-14!4;UBERON:0010092!8.72e-14!4;UBERON:0006215!8.72e-14!4;UBERON:0003076!3.87e-10!12;UBERON:0003057!3.87e-10!12;UBERON:0002298!3.15e-09!6;UBERON:0001896!2.35e-07!2;UBERON:0005290!2.35e-07!2;UBERON:0010096!2.35e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0002038,7.15e-11,3;UBERON:0009663,7.15e-11,3;UBERON:0009661,7.15e-11,3;UBERON:0000125,7.15e-11,3;UBERON:0002308,7.15e-11,3;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12;UBERON:0002950,1.73e-08,4;UBERON:0001891,1.73e-08,4;UBERON:0009616,1.73e-08,4;UBERON:0010286,1.73e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51264699101243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.1497463512794,71.2118803165747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Crtam}} | ||
|EntrezGene=54698 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=Q149L7 | |||
|association_with_transcript=-21bp_to_uc009pad.1_5end | |||
|description=CAGE_peak_2_at_Crtam_5end | |||
|id=chr9:40792571..40792583,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,7.15e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!1.58e-19!6;UBERON:0004732!1.58e-19!6;UBERON:0002028!1.58e-19!6;UBERON:0007277!1.58e-19!6;UBERON:0002037!8.72e-14!4;UBERON:0002680!8.72e-14!4;UBERON:0001895!8.72e-14!4;UBERON:0010092!8.72e-14!4;UBERON:0006215!8.72e-14!4;UBERON:0003076!3.87e-10!12;UBERON:0003057!3.87e-10!12;UBERON:0002298!3.15e-09!6;UBERON:0001896!2.35e-07!2;UBERON:0005290!2.35e-07!2;UBERON:0010096!2.35e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.63e-30,4;UBERON:0002680,5.63e-30,4;UBERON:0001895,5.63e-30,4;UBERON:0010092,5.63e-30,4;UBERON:0006215,5.63e-30,4;UBERON:0004733,1.98e-20,6;UBERON:0004732,1.98e-20,6;UBERON:0002028,1.98e-20,6;UBERON:0007277,1.98e-20,6;UBERON:0002038,7.15e-11,3;UBERON:0009663,7.15e-11,3;UBERON:0009661,7.15e-11,3;UBERON:0000125,7.15e-11,3;UBERON:0002308,7.15e-11,3;UBERON:0003076,8.07e-11,12;UBERON:0003057,8.07e-11,12;UBERON:0002950,1.73e-08,4;UBERON:0001891,1.73e-08,4;UBERON:0009616,1.73e-08,4;UBERON:0010286,1.73e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51264699101243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.1497463512794,71.2118803165747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Crtam | |||
}} |
Revision as of 17:48, 14 September 2013
Short description: | p2@Crtam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Crtam_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -21bp_to_uc009pad.1_5end |
EntrezGene: | Crtam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 7.15e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.63e-30 | 4 |
regional part of metencephalon | 5.63e-30 | 4 |
metencephalon | 5.63e-30 | 4 |
future metencephalon | 5.63e-30 | 4 |
rhombic lip | 5.63e-30 | 4 |
segmental subdivision of hindbrain | 1.98e-20 | 6 |
segmental subdivision of nervous system | 1.98e-20 | 6 |
hindbrain | 1.98e-20 | 6 |
presumptive hindbrain | 1.98e-20 | 6 |
substantia nigra | 7.15e-11 | 3 |
telencephalic nucleus | 7.15e-11 | 3 |
midbrain nucleus | 7.15e-11 | 3 |
neural nucleus | 7.15e-11 | 3 |
nucleus of brain | 7.15e-11 | 3 |
posterior neural tube | 8.07e-11 | 12 |
chordal neural plate | 8.07e-11 | 12 |
regional part of midbrain | 1.73e-08 | 4 |
midbrain | 1.73e-08 | 4 |
presumptive midbrain | 1.73e-08 | 4 |
midbrain neural tube | 1.73e-08 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.