FFCP PHASE1:Mm9::chr17:87500395..87500399,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1406|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:87500395..87500399,-|id=chr17:87500395..87500399,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,2.99e-24,3;CL:0000359,2.99e-24,3;CL:0002539,2.99e-24,3;CL:0000514,2.99e-24,3;CL:0000680,1.08e-12,6;CL:0000187,1.08e-12,6;CL:0000056,1.08e-12,6;CL:0000222,4.98e-11,7;CL:0000355,8.40e-09,9;CL:0002293,4.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.99e-24,3;UBERON:0004237,2.99e-24,3;UBERON:0004695,2.99e-24,3;UBERON:0002111,2.99e-24,3;UBERON:0004178,2.99e-24,3;UBERON:0000947,1.74e-18,4;UBERON:0001637,1.74e-18,4;UBERON:0004573,1.74e-18,4;UBERON:0003509,1.74e-18,4;UBERON:0004571,1.74e-18,4;UBERON:0010191,1.74e-18,4;UBERON:0004572,1.74e-18,4;UBERON:0000055,5.16e-15,5;UBERON:0007500,5.16e-15,5;UBERON:0001981,5.16e-15,5;UBERON:0002049,5.16e-15,5;UBERON:0007798,5.16e-15,5;UBERON:0004537,5.16e-15,5;UBERON:0006965,5.16e-15,5;UBERON:0001134,8.40e-09,9;UBERON:0002036,8.40e-09,9;UBERON:0002385,8.40e-09,9;UBERON:0000486,8.40e-09,9;UBERON:0007503,8.40e-09,9;UBERON:0001015,8.40e-09,9;UBERON:0002329,8.40e-09,9;UBERON:0003082,8.40e-09,9;UBERON:0003059,8.40e-09,9;UBERON:0007282,8.40e-09,9;UBERON:0004290,8.40e-09,9;UBERON:0009618,8.40e-09,9;UBERON:0000383,5.10e-08,10;UBERON:0007524,2.24e-07,11;UBERON:0003077,2.24e-07,11;UBERON:0007285,2.24e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.405507724878058,3.30384153891027,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.511290967734173,1.03914401841148,0.70667914902068,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,1.83000241127451,0.125654352112864,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0,0,0.328281799490123,0,0,0.170870880797853,0,0.185194527369712,0,0,0.686334519619568,0,0,0,0,0,0,0,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.179427713218951,0,0,0.187682475451182,0,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0.618105171716683,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr17:87500395..87500399,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1406 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:87500395..87500399,- | |||
|id=chr17:87500395..87500399,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.99e-24,3;CL:0000359,2.99e-24,3;CL:0002539,2.99e-24,3;CL:0000514,2.99e-24,3;CL:0000680,1.08e-12,6;CL:0000187,1.08e-12,6;CL:0000056,1.08e-12,6;CL:0000222,4.98e-11,7;CL:0000355,8.40e-09,9;CL:0002293,4.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.99e-24,3;UBERON:0004237,2.99e-24,3;UBERON:0004695,2.99e-24,3;UBERON:0002111,2.99e-24,3;UBERON:0004178,2.99e-24,3;UBERON:0000947,1.74e-18,4;UBERON:0001637,1.74e-18,4;UBERON:0004573,1.74e-18,4;UBERON:0003509,1.74e-18,4;UBERON:0004571,1.74e-18,4;UBERON:0010191,1.74e-18,4;UBERON:0004572,1.74e-18,4;UBERON:0000055,5.16e-15,5;UBERON:0007500,5.16e-15,5;UBERON:0001981,5.16e-15,5;UBERON:0002049,5.16e-15,5;UBERON:0007798,5.16e-15,5;UBERON:0004537,5.16e-15,5;UBERON:0006965,5.16e-15,5;UBERON:0001134,8.40e-09,9;UBERON:0002036,8.40e-09,9;UBERON:0002385,8.40e-09,9;UBERON:0000486,8.40e-09,9;UBERON:0007503,8.40e-09,9;UBERON:0001015,8.40e-09,9;UBERON:0002329,8.40e-09,9;UBERON:0003082,8.40e-09,9;UBERON:0003059,8.40e-09,9;UBERON:0007282,8.40e-09,9;UBERON:0004290,8.40e-09,9;UBERON:0009618,8.40e-09,9;UBERON:0000383,5.10e-08,10;UBERON:0007524,2.24e-07,11;UBERON:0003077,2.24e-07,11;UBERON:0007285,2.24e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.405507724878058,3.30384153891027,0,0,0.219686182734472,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.511290967734173,1.03914401841148,0.70667914902068,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0,0.258937883647172,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,1.83000241127451,0.125654352112864,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0.210289948564127,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0.234690248288502,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0,0,0.328281799490123,0,0,0.170870880797853,0,0.185194527369712,0,0,0.686334519619568,0,0,0,0,0,0,0,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0.104859344425711,0.241584120826006,0.576060012515731,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.179427713218951,0,0,0.187682475451182,0,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0.618105171716683,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr17:87500395..87500399,- | |||
}} |
Revision as of 15:34, 13 September 2013
Short description: | p@chr17:87500395..87500399, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:87500395..87500399, - |
Coexpression cluster: | MCL_coexpression_mm9:1406 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.99e-24 | 3 |
vascular associated smooth muscle cell | 2.99e-24 | 3 |
aortic smooth muscle cell | 2.99e-24 | 3 |
smooth muscle myoblast | 2.99e-24 | 3 |
muscle precursor cell | 1.08e-12 | 6 |
muscle cell | 1.08e-12 | 6 |
myoblast | 1.08e-12 | 6 |
mesodermal cell | 4.98e-11 | 7 |
multi-potent skeletal muscle stem cell | 8.40e-09 | 9 |
epithelial cell of thymus | 4.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.99e-24 | 3 |
blood vessel smooth muscle | 2.99e-24 | 3 |
arterial system smooth muscle | 2.99e-24 | 3 |
artery smooth muscle tissue | 2.99e-24 | 3 |
aorta smooth muscle tissue | 2.99e-24 | 3 |
aorta | 1.74e-18 | 4 |
artery | 1.74e-18 | 4 |
systemic artery | 1.74e-18 | 4 |
arterial blood vessel | 1.74e-18 | 4 |
systemic arterial system | 1.74e-18 | 4 |
aortic system | 1.74e-18 | 4 |
arterial system | 1.74e-18 | 4 |
vessel | 5.16e-15 | 5 |
epithelial tube open at both ends | 5.16e-15 | 5 |
blood vessel | 5.16e-15 | 5 |
vasculature | 5.16e-15 | 5 |
vascular system | 5.16e-15 | 5 |
blood vasculature | 5.16e-15 | 5 |
vascular cord | 5.16e-15 | 5 |
skeletal muscle tissue | 8.40e-09 | 9 |
striated muscle tissue | 8.40e-09 | 9 |
muscle tissue | 8.40e-09 | 9 |
multilaminar epithelium | 8.40e-09 | 9 |
epithelial vesicle | 8.40e-09 | 9 |
musculature | 8.40e-09 | 9 |
somite | 8.40e-09 | 9 |
myotome | 8.40e-09 | 9 |
presomitic mesoderm | 8.40e-09 | 9 |
presumptive segmental plate | 8.40e-09 | 9 |
dermomyotome | 8.40e-09 | 9 |
trunk paraxial mesoderm | 8.40e-09 | 9 |
musculature of body | 5.10e-08 | 10 |
dense mesenchyme tissue | 2.24e-07 | 11 |
paraxial mesoderm | 2.24e-07 | 11 |
presumptive paraxial mesoderm | 2.24e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.