FFCP PHASE1:Mm9::chr15:77631187..77631221,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=169|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:77631187..77631221,+|id=chr15:77631187..77631221,+|ontology_enrichment_celltype=CL:0000084!6.19e-16!11;CL:0000827!6.19e-16!11;CL:0000988!2.09e-14!32;CL:0002032!2.09e-14!32;CL:0000037!2.09e-14!32;CL:0000566!2.09e-14!32;CL:0000837!2.09e-14!32;CL:0000838!2.25e-14!12;CL:0002320!9.99e-14!46;CL:0000134!9.99e-14!46;CL:0000791!1.99e-13!9;CL:0000789!1.99e-13!9;CL:0002420!1.99e-13!9;CL:0002419!1.99e-13!9;CL:0000790!1.99e-13!9;CL:0000542!4.68e-13!13;CL:0000051!4.68e-13!13;CL:0000624!6.38e-12!8;CL:0000034!2.73e-11!97;CL:0000219!9.75e-11!54;CL:0000063!1.69e-10!66;CL:0000144!1.72e-09!121;CL:0000012!1.72e-09!121;CL:0000723!1.93e-09!91;CL:0000048!1.93e-09!91;CL:0000738!2.38e-09!17;CL:0002087!2.38e-09!17;CL:0000893!4.64e-09!6;CL:0002489!4.64e-09!6;CL:0000898!4.64e-09!6;CL:0000809!4.64e-09!6;CL:0000810!4.64e-09!6;CL:0000895!4.64e-09!6;CL:0000808!4.64e-09!6;CL:0000894!4.64e-09!6;CL:0000806!4.64e-09!6;CL:0000807!4.64e-09!6;CL:0000805!4.64e-09!6;CL:0002425!4.64e-09!6;CL:0002436!4.64e-09!6;CL:0002427!4.64e-09!6;CL:0002428!4.64e-09!6;CL:0002429!4.64e-09!6;CL:0002433!4.64e-09!6;CL:0002431!4.64e-09!6;CL:0002432!4.64e-09!6;CL:0002031!4.13e-08!25;CL:0002371!2.07e-07!118|ontology_enrichment_celltype_v019_2=CL:0000988,6.23e-10,32;CL:0002032,6.23e-10,32;CL:0000037,6.23e-10,32;CL:0000837,6.23e-10,32;CL:0000049,6.59e-10,19;CL:0002320,1.68e-08,46;CL:0000134,1.68e-08,46;CL:0000034,6.96e-08,97;CL:0000213,4.10e-07,1;CL:0002078,4.10e-07,1;CL:0000115,4.10e-07,1;CL:0002262,4.10e-07,1;CL:1000398,4.10e-07,1;CL:0000219,4.46e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.99e-14!46;UBERON:0002370!5.05e-08!23;UBERON:0000974!5.05e-08!23;UBERON:0004807!5.05e-08!23;UBERON:0005058!5.05e-08!23;UBERON:0003351!5.05e-08!23;UBERON:0009113!5.05e-08!23;UBERON:0003295!5.05e-08!23;UBERON:0009722!5.05e-08!23;UBERON:0005562!5.05e-08!23;UBERON:0007690!5.05e-08!23;UBERON:0000072!1.22e-07!27;UBERON:0006562!1.45e-07!24;UBERON:0003408!1.45e-07!24;UBERON:0001557!1.45e-07!24;UBERON:0001042!1.45e-07!24;UBERON:0008814!1.45e-07!24;UBERON:0009145!1.45e-07!24;UBERON:0002390!9.95e-07!45;UBERON:0003061!9.95e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.68e-08,46;UBERON:0002394,4.10e-07,1;UBERON:0001281,4.10e-07,1;UBERON:0000353,4.10e-07,1;UBERON:0003497,4.10e-07,1;UBERON:0003909,4.10e-07,1;UBERON:0003928,4.10e-07,1;UBERON:0003835,4.10e-07,1;UBERON:0003513,4.10e-07,1;UBERON:0001280,4.10e-07,1;UBERON:0004647,4.10e-07,1;UBERON:0002294,4.10e-07,1;UBERON:0001173,4.10e-07,1;UBERON:0004912,4.10e-07,1;UBERON:0005171,4.10e-07,1|phase1_expression=0,0,0,0,0,0.503637815735669,0.233612640595526,0.516493293766305,0.703943610758334,0.468129052643987,0.856089841127525,0.8774937489487,0.171200729931206,0.174840804837995,0,0,0,0,0.411343300817216,0,0,0.297872853602656,0.522399578277871,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,1.5626706890476,0.523523743973798,9.41170380849623,4.09827290975067,1.94204141212461,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0.677689064138264,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,2.31891590961342,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,2.03685711660064,1.19980546198682,1.52484272487678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,1.40442637462647,0.51469581422943,1.98914449576915,0,0,0,0,0.196764231747404,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,2.20971958992012,6.29781535456461,1.79659965945751,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.240390899039938,0,0.302899349844443,0,0.100826185136841,0.194915761479505,0.384847366561318,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:77631187..77631221,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:77631187..77631221,+ | |||
|id=chr15:77631187..77631221,+ | |||
|ontology_enrichment_celltype=CL:0000084!6.19e-16!11;CL:0000827!6.19e-16!11;CL:0000988!2.09e-14!32;CL:0002032!2.09e-14!32;CL:0000037!2.09e-14!32;CL:0000566!2.09e-14!32;CL:0000837!2.09e-14!32;CL:0000838!2.25e-14!12;CL:0002320!9.99e-14!46;CL:0000134!9.99e-14!46;CL:0000791!1.99e-13!9;CL:0000789!1.99e-13!9;CL:0002420!1.99e-13!9;CL:0002419!1.99e-13!9;CL:0000790!1.99e-13!9;CL:0000542!4.68e-13!13;CL:0000051!4.68e-13!13;CL:0000624!6.38e-12!8;CL:0000034!2.73e-11!97;CL:0000219!9.75e-11!54;CL:0000063!1.69e-10!66;CL:0000144!1.72e-09!121;CL:0000012!1.72e-09!121;CL:0000723!1.93e-09!91;CL:0000048!1.93e-09!91;CL:0000738!2.38e-09!17;CL:0002087!2.38e-09!17;CL:0000893!4.64e-09!6;CL:0002489!4.64e-09!6;CL:0000898!4.64e-09!6;CL:0000809!4.64e-09!6;CL:0000810!4.64e-09!6;CL:0000895!4.64e-09!6;CL:0000808!4.64e-09!6;CL:0000894!4.64e-09!6;CL:0000806!4.64e-09!6;CL:0000807!4.64e-09!6;CL:0000805!4.64e-09!6;CL:0002425!4.64e-09!6;CL:0002436!4.64e-09!6;CL:0002427!4.64e-09!6;CL:0002428!4.64e-09!6;CL:0002429!4.64e-09!6;CL:0002433!4.64e-09!6;CL:0002431!4.64e-09!6;CL:0002432!4.64e-09!6;CL:0002031!4.13e-08!25;CL:0002371!2.07e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.23e-10,32;CL:0002032,6.23e-10,32;CL:0000037,6.23e-10,32;CL:0000837,6.23e-10,32;CL:0000049,6.59e-10,19;CL:0002320,1.68e-08,46;CL:0000134,1.68e-08,46;CL:0000034,6.96e-08,97;CL:0000213,4.10e-07,1;CL:0002078,4.10e-07,1;CL:0000115,4.10e-07,1;CL:0002262,4.10e-07,1;CL:1000398,4.10e-07,1;CL:0000219,4.46e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.99e-14!46;UBERON:0002370!5.05e-08!23;UBERON:0000974!5.05e-08!23;UBERON:0004807!5.05e-08!23;UBERON:0005058!5.05e-08!23;UBERON:0003351!5.05e-08!23;UBERON:0009113!5.05e-08!23;UBERON:0003295!5.05e-08!23;UBERON:0009722!5.05e-08!23;UBERON:0005562!5.05e-08!23;UBERON:0007690!5.05e-08!23;UBERON:0000072!1.22e-07!27;UBERON:0006562!1.45e-07!24;UBERON:0003408!1.45e-07!24;UBERON:0001557!1.45e-07!24;UBERON:0001042!1.45e-07!24;UBERON:0008814!1.45e-07!24;UBERON:0009145!1.45e-07!24;UBERON:0002390!9.95e-07!45;UBERON:0003061!9.95e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.68e-08,46;UBERON:0002394,4.10e-07,1;UBERON:0001281,4.10e-07,1;UBERON:0000353,4.10e-07,1;UBERON:0003497,4.10e-07,1;UBERON:0003909,4.10e-07,1;UBERON:0003928,4.10e-07,1;UBERON:0003835,4.10e-07,1;UBERON:0003513,4.10e-07,1;UBERON:0001280,4.10e-07,1;UBERON:0004647,4.10e-07,1;UBERON:0002294,4.10e-07,1;UBERON:0001173,4.10e-07,1;UBERON:0004912,4.10e-07,1;UBERON:0005171,4.10e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0.233612640595526,0.516493293766305,0.703943610758334,0.468129052643987,0.856089841127525,0.8774937489487,0.171200729931206,0.174840804837995,0,0,0,0,0.411343300817216,0,0,0.297872853602656,0.522399578277871,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,1.5626706890476,0.523523743973798,9.41170380849623,4.09827290975067,1.94204141212461,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0.677689064138264,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,2.31891590961342,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,2.03685711660064,1.19980546198682,1.52484272487678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,1.40442637462647,0.51469581422943,1.98914449576915,0,0,0,0,0.196764231747404,0.308534225774757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,2.20971958992012,6.29781535456461,1.79659965945751,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.240390899039938,0,0.302899349844443,0,0.100826185136841,0.194915761479505,0.384847366561318,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:77631187..77631221,+ | |||
}} |
Revision as of 11:03, 13 September 2013
Short description: | p@chr15:77631187..77631221, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:77631187..77631221, + |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.23e-10 | 32 |
hematopoietic oligopotent progenitor cell | 6.23e-10 | 32 |
hematopoietic stem cell | 6.23e-10 | 32 |
hematopoietic multipotent progenitor cell | 6.23e-10 | 32 |
common myeloid progenitor | 6.59e-10 | 19 |
connective tissue cell | 1.68e-08 | 46 |
mesenchymal cell | 1.68e-08 | 46 |
stem cell | 6.96e-08 | 97 |
lining cell | 4.10e-07 | 1 |
meso-epithelial cell | 4.10e-07 | 1 |
endothelial cell | 4.10e-07 | 1 |
endothelial cell of sinusoid | 4.10e-07 | 1 |
endothelial cell of hepatic sinusoid | 4.10e-07 | 1 |
motile cell | 4.46e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.68e-08 | 46 |
bile duct | 4.10e-07 | 1 |
hepatic sinusoid | 4.10e-07 | 1 |
parenchyma | 4.10e-07 | 1 |
abdomen blood vessel | 4.10e-07 | 1 |
sinusoid | 4.10e-07 | 1 |
digestive system duct | 4.10e-07 | 1 |
abdominal segment blood vessel | 4.10e-07 | 1 |
trunk blood vessel | 4.10e-07 | 1 |
liver parenchyma | 4.10e-07 | 1 |
liver lobule | 4.10e-07 | 1 |
biliary system | 4.10e-07 | 1 |
biliary tree | 4.10e-07 | 1 |
biliary bud | 4.10e-07 | 1 |
hepatic duct | 4.10e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.