FFCP PHASE1:Mm9::chr4:66007191..66007194,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=281|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:66007191..66007194,-|id=chr4:66007191..66007194,-|ontology_enrichment_celltype=CL:0000107!2.81e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,9.20e-27,9;CL:0000540,1.23e-09,33;CL:0000047,1.23e-09,33;CL:0000031,1.23e-09,33;CL:0000404,1.23e-09,33;CL:0000393,4.52e-08,39;CL:0000211,4.52e-08,39;CL:0002319,2.87e-07,43;CL:0000221,4.33e-07,44;CL:0000133,4.33e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.57e-08!102;UBERON:0000924!1.57e-08!102;UBERON:0006601!1.57e-08!102;UBERON:0002410!2.81e-08!9;UBERON:0000010!4.16e-08!11;UBERON:0002346!7.91e-08!71;UBERON:0003075!7.91e-08!71;UBERON:0007284!7.91e-08!71;UBERON:0000073!1.61e-07!75;UBERON:0001016!1.61e-07!75;UBERON:0001017!3.21e-07!73;UBERON:0005743!3.21e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0002410,9.20e-27,9;UBERON:0000010,7.10e-22,11;UBERON:0010313,6.24e-21,3;UBERON:0002342,6.24e-21,3;UBERON:0002005,6.24e-21,3;UBERON:0005428,6.24e-21,3;UBERON:0005062,6.24e-21,3;UBERON:0000013,7.30e-21,3;UBERON:0001017,1.81e-08,73;UBERON:0001016,3.26e-08,75;UBERON:0002037,4.12e-08,4;UBERON:0002680,4.12e-08,4;UBERON:0001895,4.12e-08,4;UBERON:0010092,4.12e-08,4;UBERON:0006215,4.12e-08,4;UBERON:0004121,1.24e-07,95;UBERON:0000924,1.24e-07,95;UBERON:0006601,1.24e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,2.8138130501584,0.30559649555362,0.589257170947335,0.711858403995515,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,6.14839673724249,5.65506108396329,0,0,0,0,0.898743836428936,0.457500602818626,0.251308704225729,0.695297280769106,0.767146371990992,0,0.648965052271031,0.203678727700633,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.60281927134286,0.544291993210623,1.0249097622788,0.655912071918102,0.258703370739016,0,0.189106080167819,0.175951124163949,0,1.11218899690239,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0.467061369468678,0.16455984991348,0,0,0.292399974850665,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0.456994050438915,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0,0.123397163921801,0,0,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.8858587585951,0.159454768657487,0.327726629431476,0.690739927463582,0,0,0,0,0,0.321101179975584,0.703270119553219,0,0,1.89304931649754,1.95219372148319,1.29254038639679,0.955875191810208,0.445597348164788,0.283076530788832,2.02405350837447,1.46127928955656,1.18586333383957,0.321321316421807,0.141940085208269,0,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.493647061806363,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0.164140899745061,0.291480836629851,0.370850604021019,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0,0,0.259229946583586,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.513554785824136,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.549454872801795,0,0,0,0,0.572895513439397,0.859265911718438,0,0.755393897389701,2.70009000092722,0.45032120322422,0.906284817968409,0.51776031175182,0,0.399024873401031,0.170733605754134,0.729320151204882,0,0,0,0.412070114477788,0.320919209591815,0,0.25347929989024,0.565879024158229,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0.581385666529314,0.188218760830661,0.0846146078916765,0.365855945745545,0,0.271608227691724,0,0.593175090620871,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0|short_description=p@chr4:66007191..66007194,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=281 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:66007191..66007194,- | |||
|id=chr4:66007191..66007194,- | |||
|ontology_enrichment_celltype=CL:0000107!2.81e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,9.20e-27,9;CL:0000540,1.23e-09,33;CL:0000047,1.23e-09,33;CL:0000031,1.23e-09,33;CL:0000404,1.23e-09,33;CL:0000393,4.52e-08,39;CL:0000211,4.52e-08,39;CL:0002319,2.87e-07,43;CL:0000221,4.33e-07,44;CL:0000133,4.33e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.57e-08!102;UBERON:0000924!1.57e-08!102;UBERON:0006601!1.57e-08!102;UBERON:0002410!2.81e-08!9;UBERON:0000010!4.16e-08!11;UBERON:0002346!7.91e-08!71;UBERON:0003075!7.91e-08!71;UBERON:0007284!7.91e-08!71;UBERON:0000073!1.61e-07!75;UBERON:0001016!1.61e-07!75;UBERON:0001017!3.21e-07!73;UBERON:0005743!3.21e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,9.20e-27,9;UBERON:0000010,7.10e-22,11;UBERON:0010313,6.24e-21,3;UBERON:0002342,6.24e-21,3;UBERON:0002005,6.24e-21,3;UBERON:0005428,6.24e-21,3;UBERON:0005062,6.24e-21,3;UBERON:0000013,7.30e-21,3;UBERON:0001017,1.81e-08,73;UBERON:0001016,3.26e-08,75;UBERON:0002037,4.12e-08,4;UBERON:0002680,4.12e-08,4;UBERON:0001895,4.12e-08,4;UBERON:0010092,4.12e-08,4;UBERON:0006215,4.12e-08,4;UBERON:0004121,1.24e-07,95;UBERON:0000924,1.24e-07,95;UBERON:0006601,1.24e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,2.8138130501584,0.30559649555362,0.589257170947335,0.711858403995515,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,6.14839673724249,5.65506108396329,0,0,0,0,0.898743836428936,0.457500602818626,0.251308704225729,0.695297280769106,0.767146371990992,0,0.648965052271031,0.203678727700633,0,0,0,0.260240885925407,0.229902104433473,0.180062129805349,0.60281927134286,0.544291993210623,1.0249097622788,0.655912071918102,0.258703370739016,0,0.189106080167819,0.175951124163949,0,1.11218899690239,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0.467061369468678,0.16455984991348,0,0,0.292399974850665,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.38992817423824,0,0,0,0,0.456994050438915,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.189709611372772,0,0,0.123397163921801,0,0,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0.8858587585951,0.159454768657487,0.327726629431476,0.690739927463582,0,0,0,0,0,0.321101179975584,0.703270119553219,0,0,1.89304931649754,1.95219372148319,1.29254038639679,0.955875191810208,0.445597348164788,0.283076530788832,2.02405350837447,1.46127928955656,1.18586333383957,0.321321316421807,0.141940085208269,0,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.493647061806363,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0.164140899745061,0.291480836629851,0.370850604021019,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0,0,0.259229946583586,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.513554785824136,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.549454872801795,0,0,0,0,0.572895513439397,0.859265911718438,0,0.755393897389701,2.70009000092722,0.45032120322422,0.906284817968409,0.51776031175182,0,0.399024873401031,0.170733605754134,0.729320151204882,0,0,0,0.412070114477788,0.320919209591815,0,0.25347929989024,0.565879024158229,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0.581385666529314,0.188218760830661,0.0846146078916765,0.365855945745545,0,0.271608227691724,0,0.593175090620871,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr4:66007191..66007194,- | |||
}} |
Revision as of 05:23, 14 September 2013
Short description: | p@chr4:66007191..66007194, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:66007191..66007194, - |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 9.20e-27 | 9 |
neuron | 1.23e-09 | 33 |
neuronal stem cell | 1.23e-09 | 33 |
neuroblast | 1.23e-09 | 33 |
electrically signaling cell | 1.23e-09 | 33 |
electrically responsive cell | 4.52e-08 | 39 |
electrically active cell | 4.52e-08 | 39 |
neural cell | 2.87e-07 | 43 |
ectodermal cell | 4.33e-07 | 44 |
neurectodermal cell | 4.33e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 9.20e-27 | 9 |
peripheral nervous system | 7.10e-22 | 11 |
neural crest-derived structure | 6.24e-21 | 3 |
neural crest | 6.24e-21 | 3 |
enteric nervous system | 6.24e-21 | 3 |
vagal neural crest | 6.24e-21 | 3 |
neural fold | 6.24e-21 | 3 |
sympathetic nervous system | 7.30e-21 | 3 |
central nervous system | 1.81e-08 | 73 |
nervous system | 3.26e-08 | 75 |
cerebellum | 4.12e-08 | 4 |
regional part of metencephalon | 4.12e-08 | 4 |
metencephalon | 4.12e-08 | 4 |
future metencephalon | 4.12e-08 | 4 |
rhombic lip | 4.12e-08 | 4 |
ectoderm-derived structure | 1.24e-07 | 95 |
ectoderm | 1.24e-07 | 95 |
presumptive ectoderm | 1.24e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.