FFCP PHASE1:Mm9::chr1:21952415..21952473,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=226922|HGNC=|MCL_coexpression_id=2|UniProt=E9Q9F1,Q9JK45|association_with_transcript=-392bp_to_ENSMUST00000115300,NM_001160139,NM_023872,uc007alq.2,uc011wio.1_5end|description=CAGE_peak_1_at_Kcnq5_5end|id=chr1:21952415..21952473,-|ontology_enrichment_celltype=CL:0000540!1.20e-07!33;CL:0000047!1.20e-07!33;CL:0000031!1.20e-07!33;CL:0000404!1.20e-07!33;CL:0000117!9.56e-07!23;CL:0000337!9.56e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.42e-08,23;CL:0000337,5.42e-08,23;CL:0000540,1.57e-07,33;CL:0000047,1.57e-07,33;CL:0000031,1.57e-07,33;CL:0000404,1.57e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!6.91e-15!34;UBERON:0002791!8.15e-13!29;UBERON:0003528!8.15e-13!29;UBERON:0001893!8.15e-13!29;UBERON:0001049!1.54e-12!52;UBERON:0005068!1.54e-12!52;UBERON:0006241!1.54e-12!52;UBERON:0007135!1.54e-12!52;UBERON:0001017!1.85e-12!73;UBERON:0005743!1.85e-12!73;UBERON:0003080!3.98e-12!40;UBERON:0000073!5.70e-12!75;UBERON:0001016!5.70e-12!75;UBERON:0000955!6.95e-12!50;UBERON:0006238!6.95e-12!50;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0002616!2.32e-11!49;UBERON:0002346!3.07e-11!71;UBERON:0003075!3.07e-11!71;UBERON:0007284!3.07e-11!71;UBERON:0003056!1.02e-10!49;UBERON:0000956!2.60e-10!21;UBERON:0001869!2.60e-10!21;UBERON:0000203!2.60e-10!21;UBERON:0000033!6.65e-10!63;UBERON:0000025!9.03e-10!114;UBERON:0004121!2.13e-09!102;UBERON:0000924!2.13e-09!102;UBERON:0006601!2.13e-09!102;UBERON:0004111!4.06e-09!122;UBERON:0002048!1.05e-08!14;UBERON:0000117!1.05e-08!14;UBERON:0000171!1.05e-08!14;UBERON:0000170!1.05e-08!14;UBERON:0005597!1.05e-08!14;UBERON:0000118!1.05e-08!14;UBERON:0002021!2.06e-08!10;UBERON:0000411!2.06e-08!10;UBERON:0001950!2.06e-08!10;UBERON:0002619!2.66e-08!17;UBERON:0005153!1.74e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.63e-22,34;UBERON:0000073,1.11e-19,54;UBERON:0003528,1.37e-19,29;UBERON:0002791,1.37e-19,29;UBERON:0001893,1.37e-19,29;UBERON:0001049,2.74e-18,52;UBERON:0005068,2.74e-18,52;UBERON:0006241,2.74e-18,52;UBERON:0007135,2.74e-18,52;UBERON:0000956,3.54e-18,21;UBERON:0001869,3.54e-18,21;UBERON:0000203,3.54e-18,21;UBERON:0001017,1.87e-17,73;UBERON:0001016,1.24e-16,75;UBERON:0003080,5.47e-16,40;UBERON:0000955,7.54e-16,47;UBERON:0006238,7.54e-16,47;UBERON:0002780,2.49e-15,39;UBERON:0001890,2.49e-15,39;UBERON:0006240,2.49e-15,39;UBERON:0002616,5.36e-15,46;UBERON:0000025,1.11e-14,114;UBERON:0002619,1.14e-14,17;UBERON:0004111,2.82e-14,122;UBERON:0002346,8.61e-14,64;UBERON:0003075,8.61e-14,64;UBERON:0007284,8.61e-14,64;UBERON:0002021,2.06e-13,10;UBERON:0000411,2.06e-13,10;UBERON:0001950,2.06e-13,10;UBERON:0002048,1.94e-12,14;UBERON:0000117,1.94e-12,14;UBERON:0000171,1.94e-12,14;UBERON:0000170,1.94e-12,14;UBERON:0005597,1.94e-12,14;UBERON:0000118,1.94e-12,14;UBERON:0003056,2.02e-11,49;UBERON:0004121,3.63e-11,95;UBERON:0000924,3.63e-11,95;UBERON:0006601,3.63e-11,95;UBERON:0010371,9.28e-11,73;UBERON:0005153,1.54e-09,17;UBERON:0005178,1.54e-09,17;UBERON:0005181,1.54e-09,17;UBERON:0002224,1.54e-09,17;UBERON:0000915,1.54e-09,17;UBERON:0008947,1.54e-09,17;UBERON:0003258,1.54e-09,17;UBERON:0010314,1.63e-09,92;UBERON:0005157,8.38e-09,20;UBERON:0011216,1.41e-07,194|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0,3.82694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0,0,0,0.606949382578793,0,0,0.338844532069132,0,0,0,0,0,0,1.14058573539325,3.51015439662396,2.52389953621658,1.71390590642282,2.20868540951614,1.22490799214954,1.34183659425531,3.67687514644008,2.20231761998777,1.40456071893706,1.53606533256243,0.263772575460388,0.823388792421687,1.04182674111352,0.558365998002762,2.25105044012672,5.50073691996516,2.35702868378934,3.70166370077668,0.559198337475902,0,0.453429360640713,0,0.860423876981386,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0,1.04091196059682,0.608930956624282,0,0.150722640552623,0.470354828542819,0.376999773989026,0,1.01219549843938,0,0.647067399789637,0.883366073841574,0,0,0,0,0,0.11981512450592,0,0,1.49790639404823,26.5350349634803,4.02093926761166,14.0797699355744,17.3886510984625,2.49345653471472,11.8436122039463,0.203678727700633,0.746441823660558,0,0.210441855886474,0.260240885925407,0.229902104433473,0,0.150704817835715,0.340182495756639,0.640568601424249,0.468508622798644,0.517406741478031,0,0.567318240503458,1.05570674498369,0.219195732427575,1.66828349535359,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,2.07125772535502,0.703578179943289,1.08037236876609,2.13070262026689,0.393528463494808,0.462801338662135,0.465067889500816,0.804820204198858,0,0.16455984991348,0.164167464079095,0.324275238183423,0,0,0.134206418760372,14.2997165023607,2.16099685996497,0,0,0.639864751605702,1.16118335930219,0.77320476793256,0.80673409849337,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.571242563048644,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.393117990226406,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0.179397413521912,0,4.80358294433172,1.13694847062291,0.814824882210129,1.86719594352707,1.87752198630802,2.84760637651087,4.28478553594825,11.1226179278945,6.14777062014145,5.97954662051692,10.0456504254217,9.99566219766002,10.3610989119537,7.37710198765709,0,0,0.983528546038072,0.275936746304732,1.28440471990234,1.99259867206745,0,0,0.315508219416257,0.780877488593277,1.72338718186239,0.477937595905104,0.222798674082394,1.69845918473299,1.61924280669958,1.16902343164525,0.790575555893047,4.17717711348349,0.709700426041343,0.35613120733451,0,0.989820737835213,0,1.69946445308487,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0.540183282093931,0.517434735131018,0.214337035031592,0.177340233642274,0.713475270408282,0.493647061806363,0,0.469343416127421,0.42366414172764,0,0,0,0.180938774784468,0.119372344003136,0.328281799490123,0,1.8542530201051,0.170870880797853,4.33412422722767,2.03713980106683,0,0.410082683163076,0,0,0.279902904647316,0.138199973804424,0,0.632671987162271,1.21991680276109,0.86404272657441,0.418176592028937,0.655087691238533,0.134864346384821,0.495920734352016,0.523511883968059,0,0,0,0.149516546043979,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0.410843828659309,0,0.179026695667481,0,0.120195449519969,0.295379054349154,0.100966449948148,0.228620419965,0.100826185136841,0.0974578807397524,0.384847366561318,0,1.36038230169127,0,0,0,2.12508553435409,1.87682475451182,0.183151624267265,0.643105137237198,0,18.6368108063632,13.3494318587081,11.4579102687879,12.8889886757766,15.7568979547248,16.6186657425734,13.5004500046361,15.3109209096235,12.6879874515577,16.5683299760582,0.103787347584177,0,1.19513524027894,0.243106717068294,0.628839487883947,0.183843508450014,1.33348036680969,1.03017528619447,0.962757628775446,2.52697211763797,0.50695859978048,0.754505365544305,1.12369808963859,1.28050304809739,0.804096565378586,1.42888107384922,0.579421629724277,0.578727661391115,0.412085900803307,0.588795680537589,0,1.06485483695602,1.1921809497366,0.581385666529314,1.59985946706062,1.18460451048347,0.548783918618318,0.526139422875686,1.49384525230448,0.561142271657738,0.593175090620871,1.47756723563345,0,0.929621047115796,0.385813221962283,0.999242311751784,0.467863216890817,1.07435527024149,0.765153328275374,0,0.231867835620421|short_description=p1@Kcnq5}} | ||
|EntrezGene=226922 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=E9Q9F1,Q9JK45 | |||
|association_with_transcript=-392bp_to_ENSMUST00000115300,NM_001160139,NM_023872,uc007alq.2,uc011wio.1_5end | |||
|description=CAGE_peak_1_at_Kcnq5_5end | |||
|id=chr1:21952415..21952473,- | |||
|ontology_enrichment_celltype=CL:0000540!1.20e-07!33;CL:0000047!1.20e-07!33;CL:0000031!1.20e-07!33;CL:0000404!1.20e-07!33;CL:0000117!9.56e-07!23;CL:0000337!9.56e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.42e-08,23;CL:0000337,5.42e-08,23;CL:0000540,1.57e-07,33;CL:0000047,1.57e-07,33;CL:0000031,1.57e-07,33;CL:0000404,1.57e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!6.91e-15!34;UBERON:0002791!8.15e-13!29;UBERON:0003528!8.15e-13!29;UBERON:0001893!8.15e-13!29;UBERON:0001049!1.54e-12!52;UBERON:0005068!1.54e-12!52;UBERON:0006241!1.54e-12!52;UBERON:0007135!1.54e-12!52;UBERON:0001017!1.85e-12!73;UBERON:0005743!1.85e-12!73;UBERON:0003080!3.98e-12!40;UBERON:0000073!5.70e-12!75;UBERON:0001016!5.70e-12!75;UBERON:0000955!6.95e-12!50;UBERON:0006238!6.95e-12!50;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0002616!2.32e-11!49;UBERON:0002346!3.07e-11!71;UBERON:0003075!3.07e-11!71;UBERON:0007284!3.07e-11!71;UBERON:0003056!1.02e-10!49;UBERON:0000956!2.60e-10!21;UBERON:0001869!2.60e-10!21;UBERON:0000203!2.60e-10!21;UBERON:0000033!6.65e-10!63;UBERON:0000025!9.03e-10!114;UBERON:0004121!2.13e-09!102;UBERON:0000924!2.13e-09!102;UBERON:0006601!2.13e-09!102;UBERON:0004111!4.06e-09!122;UBERON:0002048!1.05e-08!14;UBERON:0000117!1.05e-08!14;UBERON:0000171!1.05e-08!14;UBERON:0000170!1.05e-08!14;UBERON:0005597!1.05e-08!14;UBERON:0000118!1.05e-08!14;UBERON:0002021!2.06e-08!10;UBERON:0000411!2.06e-08!10;UBERON:0001950!2.06e-08!10;UBERON:0002619!2.66e-08!17;UBERON:0005153!1.74e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.63e-22,34;UBERON:0000073,1.11e-19,54;UBERON:0003528,1.37e-19,29;UBERON:0002791,1.37e-19,29;UBERON:0001893,1.37e-19,29;UBERON:0001049,2.74e-18,52;UBERON:0005068,2.74e-18,52;UBERON:0006241,2.74e-18,52;UBERON:0007135,2.74e-18,52;UBERON:0000956,3.54e-18,21;UBERON:0001869,3.54e-18,21;UBERON:0000203,3.54e-18,21;UBERON:0001017,1.87e-17,73;UBERON:0001016,1.24e-16,75;UBERON:0003080,5.47e-16,40;UBERON:0000955,7.54e-16,47;UBERON:0006238,7.54e-16,47;UBERON:0002780,2.49e-15,39;UBERON:0001890,2.49e-15,39;UBERON:0006240,2.49e-15,39;UBERON:0002616,5.36e-15,46;UBERON:0000025,1.11e-14,114;UBERON:0002619,1.14e-14,17;UBERON:0004111,2.82e-14,122;UBERON:0002346,8.61e-14,64;UBERON:0003075,8.61e-14,64;UBERON:0007284,8.61e-14,64;UBERON:0002021,2.06e-13,10;UBERON:0000411,2.06e-13,10;UBERON:0001950,2.06e-13,10;UBERON:0002048,1.94e-12,14;UBERON:0000117,1.94e-12,14;UBERON:0000171,1.94e-12,14;UBERON:0000170,1.94e-12,14;UBERON:0005597,1.94e-12,14;UBERON:0000118,1.94e-12,14;UBERON:0003056,2.02e-11,49;UBERON:0004121,3.63e-11,95;UBERON:0000924,3.63e-11,95;UBERON:0006601,3.63e-11,95;UBERON:0010371,9.28e-11,73;UBERON:0005153,1.54e-09,17;UBERON:0005178,1.54e-09,17;UBERON:0005181,1.54e-09,17;UBERON:0002224,1.54e-09,17;UBERON:0000915,1.54e-09,17;UBERON:0008947,1.54e-09,17;UBERON:0003258,1.54e-09,17;UBERON:0010314,1.63e-09,92;UBERON:0005157,8.38e-09,20;UBERON:0011216,1.41e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0.171200729931206,0,0.333109761815663,0,0,0.157731082679119,0.411343300817216,0,3.82694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.335565212115473,0,0,0,0,0,0.606949382578793,0,0,0.338844532069132,0,0,0,0,0,0,1.14058573539325,3.51015439662396,2.52389953621658,1.71390590642282,2.20868540951614,1.22490799214954,1.34183659425531,3.67687514644008,2.20231761998777,1.40456071893706,1.53606533256243,0.263772575460388,0.823388792421687,1.04182674111352,0.558365998002762,2.25105044012672,5.50073691996516,2.35702868378934,3.70166370077668,0.559198337475902,0,0.453429360640713,0,0.860423876981386,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0,1.04091196059682,0.608930956624282,0,0.150722640552623,0.470354828542819,0.376999773989026,0,1.01219549843938,0,0.647067399789637,0.883366073841574,0,0,0,0,0,0.11981512450592,0,0,1.49790639404823,26.5350349634803,4.02093926761166,14.0797699355744,17.3886510984625,2.49345653471472,11.8436122039463,0.203678727700633,0.746441823660558,0,0.210441855886474,0.260240885925407,0.229902104433473,0,0.150704817835715,0.340182495756639,0.640568601424249,0.468508622798644,0.517406741478031,0,0.567318240503458,1.05570674498369,0.219195732427575,1.66828349535359,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,2.07125772535502,0.703578179943289,1.08037236876609,2.13070262026689,0.393528463494808,0.462801338662135,0.465067889500816,0.804820204198858,0,0.16455984991348,0.164167464079095,0.324275238183423,0,0,0.134206418760372,14.2997165023607,2.16099685996497,0,0,0.639864751605702,1.16118335930219,0.77320476793256,0.80673409849337,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,1.00534083520108,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.571242563048644,0,0.203651327845314,0,0.280543279561274,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0.393117990226406,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0.179397413521912,0,4.80358294433172,1.13694847062291,0.814824882210129,1.86719594352707,1.87752198630802,2.84760637651087,4.28478553594825,11.1226179278945,6.14777062014145,5.97954662051692,10.0456504254217,9.99566219766002,10.3610989119537,7.37710198765709,0,0,0.983528546038072,0.275936746304732,1.28440471990234,1.99259867206745,0,0,0.315508219416257,0.780877488593277,1.72338718186239,0.477937595905104,0.222798674082394,1.69845918473299,1.61924280669958,1.16902343164525,0.790575555893047,4.17717711348349,0.709700426041343,0.35613120733451,0,0.989820737835213,0,1.69946445308487,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0.540183282093931,0.517434735131018,0.214337035031592,0.177340233642274,0.713475270408282,0.493647061806363,0,0.469343416127421,0.42366414172764,0,0,0,0.180938774784468,0.119372344003136,0.328281799490123,0,1.8542530201051,0.170870880797853,4.33412422722767,2.03713980106683,0,0.410082683163076,0,0,0.279902904647316,0.138199973804424,0,0.632671987162271,1.21991680276109,0.86404272657441,0.418176592028937,0.655087691238533,0.134864346384821,0.495920734352016,0.523511883968059,0,0,0,0.149516546043979,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0.410843828659309,0,0.179026695667481,0,0.120195449519969,0.295379054349154,0.100966449948148,0.228620419965,0.100826185136841,0.0974578807397524,0.384847366561318,0,1.36038230169127,0,0,0,2.12508553435409,1.87682475451182,0.183151624267265,0.643105137237198,0,18.6368108063632,13.3494318587081,11.4579102687879,12.8889886757766,15.7568979547248,16.6186657425734,13.5004500046361,15.3109209096235,12.6879874515577,16.5683299760582,0.103787347584177,0,1.19513524027894,0.243106717068294,0.628839487883947,0.183843508450014,1.33348036680969,1.03017528619447,0.962757628775446,2.52697211763797,0.50695859978048,0.754505365544305,1.12369808963859,1.28050304809739,0.804096565378586,1.42888107384922,0.579421629724277,0.578727661391115,0.412085900803307,0.588795680537589,0,1.06485483695602,1.1921809497366,0.581385666529314,1.59985946706062,1.18460451048347,0.548783918618318,0.526139422875686,1.49384525230448,0.561142271657738,0.593175090620871,1.47756723563345,0,0.929621047115796,0.385813221962283,0.999242311751784,0.467863216890817,1.07435527024149,0.765153328275374,0,0.231867835620421 | |||
|short_description=p1@Kcnq5 | |||
}} |
Revision as of 20:10, 13 September 2013
Short description: | p1@Kcnq5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnq5_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -392bp_to_ENSMUST00000115300, NM_001160139, NM_023872, uc007alq.2, uc011wio.1_5end |
EntrezGene: | Kcnq5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.42e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.42e-08 | 23 |
neuron | 1.57e-07 | 33 |
neuronal stem cell | 1.57e-07 | 33 |
neuroblast | 1.57e-07 | 33 |
electrically signaling cell | 1.57e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.