FFCP PHASE1:Mm9::chr4:91038719..91038738,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15569|HGNC=|MCL_coexpression_id=1|UniProt=Q80UJ0|association_with_transcript=0bp_to_ENSMUST00000107110_5end|description=CAGE_peak_3_at_Elavl2_5end|id=chr4:91038719..91038738,-|ontology_enrichment_celltype=CL:0000540!2.99e-15!33;CL:0000047!2.99e-15!33;CL:0000031!2.99e-15!33;CL:0000404!2.99e-15!33;CL:0000117!5.82e-15!23;CL:0000337!5.82e-15!23;CL:0000393!9.02e-13!39;CL:0000211!9.02e-13!39;CL:0000221!3.72e-11!44;CL:0000133!3.72e-11!44;CL:0002319!4.87e-11!43;CL:0000055!5.23e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.95e-18,23;CL:0000337,2.95e-18,23;CL:0000540,7.81e-18,33;CL:0000047,7.81e-18,33;CL:0000031,7.81e-18,33;CL:0000404,7.81e-18,33;CL:0000393,4.33e-13,39;CL:0000211,4.33e-13,39;CL:0000221,3.63e-12,44;CL:0000133,3.63e-12,44;CL:0002319,5.14e-12,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.97e-26!75;UBERON:0001016!4.97e-26!75;UBERON:0001017!6.90e-26!73;UBERON:0005743!6.90e-26!73;UBERON:0002346!9.43e-25!71;UBERON:0003075!9.43e-25!71;UBERON:0007284!9.43e-25!71;UBERON:0004121!1.01e-22!102;UBERON:0000924!1.01e-22!102;UBERON:0006601!1.01e-22!102;UBERON:0001049!1.38e-22!52;UBERON:0005068!1.38e-22!52;UBERON:0006241!1.38e-22!52;UBERON:0007135!1.38e-22!52;UBERON:0000955!1.16e-21!50;UBERON:0006238!1.16e-21!50;UBERON:0002616!3.71e-21!49;UBERON:0000033!5.79e-21!63;UBERON:0003056!2.38e-19!49;UBERON:0002020!4.70e-19!34;UBERON:0003080!1.78e-18!40;UBERON:0002780!7.27e-18!39;UBERON:0001890!7.27e-18!39;UBERON:0006240!7.27e-18!39;UBERON:0002791!5.24e-16!29;UBERON:0003528!5.24e-16!29;UBERON:0001893!5.24e-16!29;UBERON:0000956!2.35e-11!21;UBERON:0001869!2.35e-11!21;UBERON:0000203!2.35e-11!21;UBERON:0007811!5.27e-09!86;UBERON:0002619!5.60e-09!17;UBERON:0002021!9.15e-08!10;UBERON:0000411!9.15e-08!10;UBERON:0001950!9.15e-08!10;UBERON:0000153!1.64e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.71e-29,75;UBERON:0001017,5.86e-29,73;UBERON:0000073,1.69e-27,54;UBERON:0002346,1.96e-26,64;UBERON:0003075,1.96e-26,64;UBERON:0007284,1.96e-26,64;UBERON:0001049,2.45e-25,52;UBERON:0005068,2.45e-25,52;UBERON:0006241,2.45e-25,52;UBERON:0007135,2.45e-25,52;UBERON:0004121,1.95e-24,95;UBERON:0000924,1.95e-24,95;UBERON:0006601,1.95e-24,95;UBERON:0002020,1.73e-22,34;UBERON:0000955,2.04e-21,47;UBERON:0006238,2.04e-21,47;UBERON:0010371,3.95e-21,73;UBERON:0003056,4.75e-21,49;UBERON:0002616,8.15e-21,46;UBERON:0003080,1.42e-20,40;UBERON:0002780,7.90e-20,39;UBERON:0001890,7.90e-20,39;UBERON:0006240,7.90e-20,39;UBERON:0003528,1.04e-18,29;UBERON:0002791,1.04e-18,29;UBERON:0001893,1.04e-18,29;UBERON:0010314,4.08e-17,92;UBERON:0000956,6.01e-13,21;UBERON:0001869,6.01e-13,21;UBERON:0000203,6.01e-13,21;UBERON:0002619,5.09e-10,17;UBERON:0002021,2.71e-09,10;UBERON:0000411,2.71e-09,10;UBERON:0001950,2.71e-09,10;UBERON:0002420,5.22e-07,8;UBERON:0007245,5.22e-07,8;UBERON:0010009,5.22e-07,8;UBERON:0010011,5.22e-07,8;UBERON:0000454,5.22e-07,8|phase1_expression=0.80074423552397,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,3.91199134694921,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.734187008646726,0,0.65407546914134,0.219686182734472,0.388859798148567,0.139986421625363,0,0,0,0,0,0.573066879877513,0.515672092277442,15.578367486189,15.869729378161,21.5502677192101,0,0,0,0,0,0.299600110518405,0,25.8187134648109,19.3058491814318,21.453146057841,12.8542942981712,12.1477697523387,10.0442455356262,6.51749202924007,10.1114066527102,41.8440347797677,36.3908913542785,37.4799941145234,12.6610836220986,12.3508318863253,16.1483144872596,31.547678887156,33.7657566019008,32.5460267764606,21.8025153250514,24.7726724590439,22.3679334990361,1.06016670666458,1.66257432234928,0,0,0,0.539703191637817,0,0,1.68533304158102,0,0,0,1.83096445709685,0,0,0,0,0,0,0.68510327831436,0.517875767294343,0.29688427812965,3.64319186208885,2.43572382649713,2.30615497256059,3.46662073271032,2.3517741427141,0.125666591329675,0,0,0,0,0,0,0,2.04946557908083,2.09446706813455,0,0,0,0,19.6225737620318,8.6925114535539,8.79580464790051,16.6871347384585,15.0872119824895,30.5448425502553,17.0353326221146,0.509196819251581,0,1.26361379216837,0.841767423545896,1.17108398666433,1.83921683546778,3.96136685571768,1.50704817835715,1.7009124787832,1.5373646434182,2.06143794031403,2.58703370739016,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0,0,0,4.17971960318836,0,0,0,1.03562886267751,0.703578179943289,0.720248245844059,0.23674473558521,0.393528463494808,1.07986979021165,0,0.536546802799238,0.233530684734339,0.658239399653922,0.32833492815819,0.162137619091711,0,0.439100230582101,0.134206418760372,20.6084149592845,14.7153595702377,0,0,0.639864751605702,0.464473343720877,0.644337306610467,0.201683524623343,0.667134131534611,0.190225626112559,0,0,0,0.397912944082302,0,0,0,0,0.379335801906163,1.5994791765362,0,0.407302655690628,0.581857461502877,0.210407459670956,0,0,0.156998727841375,0,0,0.166845105716094,0.5896769853396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| ||
|EntrezGene=15569 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q80UJ0 | |||
|association_with_transcript=0bp_to_ENSMUST00000107110_5end | |||
|description=CAGE_peak_3_at_Elavl2_5end | |||
|id=chr4:91038719..91038738,- | |||
|ontology_enrichment_celltype=CL:0000540!2.99e-15!33;CL:0000047!2.99e-15!33;CL:0000031!2.99e-15!33;CL:0000404!2.99e-15!33;CL:0000117!5.82e-15!23;CL:0000337!5.82e-15!23;CL:0000393!9.02e-13!39;CL:0000211!9.02e-13!39;CL:0000221!3.72e-11!44;CL:0000133!3.72e-11!44;CL:0002319!4.87e-11!43;CL:0000055!5.23e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.95e-18,23;CL:0000337,2.95e-18,23;CL:0000540,7.81e-18,33;CL:0000047,7.81e-18,33;CL:0000031,7.81e-18,33;CL:0000404,7.81e-18,33;CL:0000393,4.33e-13,39;CL:0000211,4.33e-13,39;CL:0000221,3.63e-12,44;CL:0000133,3.63e-12,44;CL:0002319,5.14e-12,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.97e-26!75;UBERON:0001016!4.97e-26!75;UBERON:0001017!6.90e-26!73;UBERON:0005743!6.90e-26!73;UBERON:0002346!9.43e-25!71;UBERON:0003075!9.43e-25!71;UBERON:0007284!9.43e-25!71;UBERON:0004121!1.01e-22!102;UBERON:0000924!1.01e-22!102;UBERON:0006601!1.01e-22!102;UBERON:0001049!1.38e-22!52;UBERON:0005068!1.38e-22!52;UBERON:0006241!1.38e-22!52;UBERON:0007135!1.38e-22!52;UBERON:0000955!1.16e-21!50;UBERON:0006238!1.16e-21!50;UBERON:0002616!3.71e-21!49;UBERON:0000033!5.79e-21!63;UBERON:0003056!2.38e-19!49;UBERON:0002020!4.70e-19!34;UBERON:0003080!1.78e-18!40;UBERON:0002780!7.27e-18!39;UBERON:0001890!7.27e-18!39;UBERON:0006240!7.27e-18!39;UBERON:0002791!5.24e-16!29;UBERON:0003528!5.24e-16!29;UBERON:0001893!5.24e-16!29;UBERON:0000956!2.35e-11!21;UBERON:0001869!2.35e-11!21;UBERON:0000203!2.35e-11!21;UBERON:0007811!5.27e-09!86;UBERON:0002619!5.60e-09!17;UBERON:0002021!9.15e-08!10;UBERON:0000411!9.15e-08!10;UBERON:0001950!9.15e-08!10;UBERON:0000153!1.64e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.71e-29,75;UBERON:0001017,5.86e-29,73;UBERON:0000073,1.69e-27,54;UBERON:0002346,1.96e-26,64;UBERON:0003075,1.96e-26,64;UBERON:0007284,1.96e-26,64;UBERON:0001049,2.45e-25,52;UBERON:0005068,2.45e-25,52;UBERON:0006241,2.45e-25,52;UBERON:0007135,2.45e-25,52;UBERON:0004121,1.95e-24,95;UBERON:0000924,1.95e-24,95;UBERON:0006601,1.95e-24,95;UBERON:0002020,1.73e-22,34;UBERON:0000955,2.04e-21,47;UBERON:0006238,2.04e-21,47;UBERON:0010371,3.95e-21,73;UBERON:0003056,4.75e-21,49;UBERON:0002616,8.15e-21,46;UBERON:0003080,1.42e-20,40;UBERON:0002780,7.90e-20,39;UBERON:0001890,7.90e-20,39;UBERON:0006240,7.90e-20,39;UBERON:0003528,1.04e-18,29;UBERON:0002791,1.04e-18,29;UBERON:0001893,1.04e-18,29;UBERON:0010314,4.08e-17,92;UBERON:0000956,6.01e-13,21;UBERON:0001869,6.01e-13,21;UBERON:0000203,6.01e-13,21;UBERON:0002619,5.09e-10,17;UBERON:0002021,2.71e-09,10;UBERON:0000411,2.71e-09,10;UBERON:0001950,2.71e-09,10;UBERON:0002420,5.22e-07,8;UBERON:0007245,5.22e-07,8;UBERON:0010009,5.22e-07,8;UBERON:0010011,5.22e-07,8;UBERON:0000454,5.22e-07,8 | |||
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|short_description=p3@Elavl2 | |||
}} |
Revision as of 05:35, 14 September 2013
Short description: | p3@Elavl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Elavl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000107110_5end |
EntrezGene: | Elavl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.95e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.95e-18 | 23 |
neuron | 7.81e-18 | 33 |
neuronal stem cell | 7.81e-18 | 33 |
neuroblast | 7.81e-18 | 33 |
electrically signaling cell | 7.81e-18 | 33 |
electrically responsive cell | 4.33e-13 | 39 |
electrically active cell | 4.33e-13 | 39 |
ectodermal cell | 3.63e-12 | 44 |
neurectodermal cell | 3.63e-12 | 44 |
neural cell | 5.14e-12 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.