FFCP PHASE1:Mm9::chr2:164571396..164571414,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71856|HGNC=|MCL_coexpression_id=0|UniProt=Q9DAB2,A2A4Y5|association_with_transcript=16bp_to_ENSMUST00000043448,ENSMUST00000109328,ENSMUST00000130227,uc008nvu.1,uc008nvv.1_5end|description=CAGE_peak_5_at_Wfdc3_5end|id=chr2:164571396..164571414,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000878,2.03e-07,2;CL:0000129,2.03e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.83e-09,14;UBERON:0003135,2.43e-08,15;UBERON:0003101,7.36e-08,16;UBERON:0000079,7.36e-08,16;UBERON:0004176,1.96e-07,17;UBERON:0009196,1.96e-07,17;UBERON:0009117,1.96e-07,17;UBERON:0000991,4.71e-07,18;UBERON:0005564,4.71e-07,18|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,3.06155844543851,0,0.261199789138935,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,1.76469446409304,0,0.485510353031154,0,0,0,0,0,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0.889294796111139,0,0,0,0.299600110518405,1.53687322128622,0.103689612308478,0,0.210324961351382,0,0,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.457438218012048,0,0,0,0.15279824777681,0,0.284743361598206,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0,0,0.127070227073065,0.599162557619291,0.915001205637253,0.251308704225729,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.952174563544055,0,0.157635144106191,0,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0,0,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,22.5477175473676,0,0,0,0,0,0,0,0.629156066554265,11.3544536788223,19.8740704317927,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0.77163688185482,0.412085900803307,0,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p5@Wfdc3}} | ||
|EntrezGene=71856 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q9DAB2,A2A4Y5 | |||
|association_with_transcript=16bp_to_ENSMUST00000043448,ENSMUST00000109328,ENSMUST00000130227,uc008nvu.1,uc008nvv.1_5end | |||
|description=CAGE_peak_5_at_Wfdc3_5end | |||
|id=chr2:164571396..164571414,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,2.03e-07,2;CL:0000129,2.03e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.83e-09,14;UBERON:0003135,2.43e-08,15;UBERON:0003101,7.36e-08,16;UBERON:0000079,7.36e-08,16;UBERON:0004176,1.96e-07,17;UBERON:0009196,1.96e-07,17;UBERON:0009117,1.96e-07,17;UBERON:0000991,4.71e-07,18;UBERON:0005564,4.71e-07,18 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,3.06155844543851,0,0.261199789138935,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,1.76469446409304,0,0.485510353031154,0,0,0,0,0,0.219686182734472,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,0.202316460859598,0,1.26766280701236,0,0.889294796111139,0,0,0,0.299600110518405,1.53687322128622,0.103689612308478,0,0.210324961351382,0,0,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.457438218012048,0,0,0,0.15279824777681,0,0.284743361598206,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0.41889341362691,0,0,0,0.127070227073065,0.599162557619291,0.915001205637253,0.251308704225729,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.101839363850316,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.952174563544055,0,0.157635144106191,0,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0,0,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0,0,0.141940085208269,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,22.5477175473676,0,0,0,0,0,0,0,0.629156066554265,11.3544536788223,19.8740704317927,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0.77163688185482,0.412085900803307,0,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Wfdc3 | |||
}} |
Revision as of 22:53, 13 September 2013
Short description: | p5@Wfdc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Wfdc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 16bp_to_ENSMUST00000043448, ENSMUST00000109328, ENSMUST00000130227, uc008nvu.1, uc008nvv.1_5end |
EntrezGene: | Wfdc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 2.03e-07 | 2 |
microglial cell | 2.03e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 6.83e-09 | 14 |
male reproductive organ | 2.43e-08 | 15 |
male organism | 7.36e-08 | 16 |
male reproductive system | 7.36e-08 | 16 |
external genitalia | 1.96e-07 | 17 |
indifferent external genitalia | 1.96e-07 | 17 |
indifferent gonad | 1.96e-07 | 17 |
gonad | 4.71e-07 | 18 |
gonad primordium | 4.71e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.