FFCP PHASE1:Mm9::chr1:97425600..97425609,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:97425600..97425609,+|id=chr1:97425600..97425609,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,1.20e-08,9|ontology_enrichment_disease=DOID:0060100!2.71e-12!3;DOID:4045!2.71e-12!3|ontology_enrichment_disease_v019_2=DOID:0060100,8.72e-24,3;DOID:4045,8.72e-24,3;DOID:0050686,1.84e-12,6|ontology_enrichment_uberon=UBERON:0007823!6.80e-12!5;UBERON:0000914!5.48e-10!17;UBERON:0002529!6.26e-10!6;UBERON:0000981!1.11e-08!4;UBERON:0002495!1.11e-08!4;UBERON:0003608!1.11e-08!4;UBERON:0003826!1.11e-08!4;UBERON:0008202!1.11e-08!4;UBERON:0004375!1.11e-08!4;UBERON:0002428!1.11e-08!4;UBERON:0003464!1.11e-08!4;UBERON:0003606!1.11e-08!4;UBERON:0009749!1.11e-08!4;UBERON:0003860!1.11e-08!4;UBERON:0005856!1.11e-08!4;UBERON:0005866!1.11e-08!4;UBERON:0007828!1.11e-08!4;UBERON:0005254!1.11e-08!4;UBERON:0001271!1.11e-08!4;UBERON:0002091!1.11e-08!4;UBERON:0001464!1.11e-08!4;UBERON:0003285!1.11e-08!4;UBERON:0010129!1.11e-08!4;UBERON:0006234!1.11e-08!4;UBERON:0003887!1.43e-08!10;UBERON:0001343!8.53e-08!2;UBERON:0004910!8.53e-08!2;UBERON:0004909!8.53e-08!2;UBERON:0005154!8.53e-08!2;UBERON:0005295!8.53e-08!2;UBERON:0005297!8.53e-08!2;UBERON:0005294!8.53e-08!2;UBERON:0010141!8.53e-08!2;UBERON:0005891!8.53e-08!2;UBERON:0005418!4.98e-07!5;UBERON:0002472!4.98e-07!5;UBERON:0008784!4.98e-07!5;UBERON:0006058!4.98e-07!5;UBERON:0004709!4.98e-07!5;UBERON:0005420!4.98e-07!5;UBERON:0006057!4.98e-07!5;UBERON:0000978!4.98e-07!5;UBERON:0002103!4.98e-07!5;UBERON:0000376!4.98e-07!5;UBERON:0000154!4.98e-07!5;UBERON:0005730!4.98e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.20e-08,9;UBERON:0002036,1.20e-08,9;UBERON:0002385,1.20e-08,9;UBERON:0000486,1.20e-08,9;UBERON:0007503,1.20e-08,9;UBERON:0001015,1.20e-08,9;UBERON:0002329,1.20e-08,9;UBERON:0003082,1.20e-08,9;UBERON:0003059,1.20e-08,9;UBERON:0007282,1.20e-08,9;UBERON:0004290,1.20e-08,9;UBERON:0009618,1.20e-08,9;UBERON:0000383,7.02e-08,10;UBERON:0007524,3.00e-07,11;UBERON:0003077,3.00e-07,11;UBERON:0007285,3.00e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473193248037357,0,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,1.0470474879476,12.3528612486513,6.83045484958446,8.25367600152961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:97425600..97425609,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:97425600..97425609,+ | |||
|id=chr1:97425600..97425609,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.20e-08,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.71e-12!3;DOID:4045!2.71e-12!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.72e-24,3;DOID:4045,8.72e-24,3;DOID:0050686,1.84e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0007823!6.80e-12!5;UBERON:0000914!5.48e-10!17;UBERON:0002529!6.26e-10!6;UBERON:0000981!1.11e-08!4;UBERON:0002495!1.11e-08!4;UBERON:0003608!1.11e-08!4;UBERON:0003826!1.11e-08!4;UBERON:0008202!1.11e-08!4;UBERON:0004375!1.11e-08!4;UBERON:0002428!1.11e-08!4;UBERON:0003464!1.11e-08!4;UBERON:0003606!1.11e-08!4;UBERON:0009749!1.11e-08!4;UBERON:0003860!1.11e-08!4;UBERON:0005856!1.11e-08!4;UBERON:0005866!1.11e-08!4;UBERON:0007828!1.11e-08!4;UBERON:0005254!1.11e-08!4;UBERON:0001271!1.11e-08!4;UBERON:0002091!1.11e-08!4;UBERON:0001464!1.11e-08!4;UBERON:0003285!1.11e-08!4;UBERON:0010129!1.11e-08!4;UBERON:0006234!1.11e-08!4;UBERON:0003887!1.43e-08!10;UBERON:0001343!8.53e-08!2;UBERON:0004910!8.53e-08!2;UBERON:0004909!8.53e-08!2;UBERON:0005154!8.53e-08!2;UBERON:0005295!8.53e-08!2;UBERON:0005297!8.53e-08!2;UBERON:0005294!8.53e-08!2;UBERON:0010141!8.53e-08!2;UBERON:0005891!8.53e-08!2;UBERON:0005418!4.98e-07!5;UBERON:0002472!4.98e-07!5;UBERON:0008784!4.98e-07!5;UBERON:0006058!4.98e-07!5;UBERON:0004709!4.98e-07!5;UBERON:0005420!4.98e-07!5;UBERON:0006057!4.98e-07!5;UBERON:0000978!4.98e-07!5;UBERON:0002103!4.98e-07!5;UBERON:0000376!4.98e-07!5;UBERON:0000154!4.98e-07!5;UBERON:0005730!4.98e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.20e-08,9;UBERON:0002036,1.20e-08,9;UBERON:0002385,1.20e-08,9;UBERON:0000486,1.20e-08,9;UBERON:0007503,1.20e-08,9;UBERON:0001015,1.20e-08,9;UBERON:0002329,1.20e-08,9;UBERON:0003082,1.20e-08,9;UBERON:0003059,1.20e-08,9;UBERON:0007282,1.20e-08,9;UBERON:0004290,1.20e-08,9;UBERON:0009618,1.20e-08,9;UBERON:0000383,7.02e-08,10;UBERON:0007524,3.00e-07,11;UBERON:0003077,3.00e-07,11;UBERON:0007285,3.00e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473193248037357,0,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,1.0470474879476,12.3528612486513,6.83045484958446,8.25367600152961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:97425600..97425609,+ | |||
}} |
Revision as of 21:22, 13 September 2013
Short description: | p@chr1:97425600..97425609, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:97425600..97425609, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.20e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.20e-08 | 9 |
striated muscle tissue | 1.20e-08 | 9 |
muscle tissue | 1.20e-08 | 9 |
multilaminar epithelium | 1.20e-08 | 9 |
epithelial vesicle | 1.20e-08 | 9 |
musculature | 1.20e-08 | 9 |
somite | 1.20e-08 | 9 |
myotome | 1.20e-08 | 9 |
presomitic mesoderm | 1.20e-08 | 9 |
presumptive segmental plate | 1.20e-08 | 9 |
dermomyotome | 1.20e-08 | 9 |
trunk paraxial mesoderm | 1.20e-08 | 9 |
musculature of body | 7.02e-08 | 10 |
dense mesenchyme tissue | 3.00e-07 | 11 |
paraxial mesoderm | 3.00e-07 | 11 |
presumptive paraxial mesoderm | 3.00e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.72e-24 | 3 |
muscle cancer | 8.72e-24 | 3 |
organ system cancer | 1.84e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.