FFCP PHASE1:Mm9::chr4:13670499..13670526,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12395|HGNC=|MCL_coexpression_id=22|UniProt=Q3UQX8|association_with_transcript=50bp_to_NM_001111026,uc008sau.2_5end|description=CAGE_peak_2_at_Runx1t1_5end|id=chr4:13670499..13670526,+|ontology_enrichment_celltype=CL:0000117!2.26e-11!23;CL:0000337!2.26e-11!23;CL:0000540!9.93e-09!33;CL:0000047!9.93e-09!33;CL:0000031!9.93e-09!33;CL:0000404!9.93e-09!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-12,23;CL:0000337,2.38e-12,23;CL:0000540,5.06e-09,33;CL:0000047,5.06e-09,33;CL:0000031,5.06e-09,33;CL:0000404,5.06e-09,33;CL:0000393,9.69e-07,39;CL:0000211,9.69e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!3.18e-16!49;UBERON:0002020!1.12e-14!34;UBERON:0000033!1.85e-14!63;UBERON:0001049!5.77e-14!52;UBERON:0005068!5.77e-14!52;UBERON:0006241!5.77e-14!52;UBERON:0007135!5.77e-14!52;UBERON:0003080!2.50e-13!40;UBERON:0002346!5.16e-13!71;UBERON:0003075!5.16e-13!71;UBERON:0007284!5.16e-13!71;UBERON:0002780!6.43e-13!39;UBERON:0001890!6.43e-13!39;UBERON:0006240!6.43e-13!39;UBERON:0001017!8.75e-13!73;UBERON:0005743!8.75e-13!73;UBERON:0000073!2.92e-12!75;UBERON:0001016!2.92e-12!75;UBERON:0000955!3.32e-12!50;UBERON:0006238!3.32e-12!50;UBERON:0002791!4.72e-12!29;UBERON:0003528!4.72e-12!29;UBERON:0001893!4.72e-12!29;UBERON:0002616!1.09e-11!49;UBERON:0004121!1.32e-11!102;UBERON:0000924!1.32e-11!102;UBERON:0006601!1.32e-11!102;UBERON:0000468!9.73e-10!333;UBERON:0000956!5.42e-09!21;UBERON:0001869!5.42e-09!21;UBERON:0000203!5.42e-09!21;UBERON:0000025!3.94e-08!114;UBERON:0004111!1.04e-07!122;UBERON:0000922!2.35e-07!328;UBERON:0002619!7.08e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.13e-18,49;UBERON:0002346,3.20e-17,64;UBERON:0003075,3.20e-17,64;UBERON:0007284,3.20e-17,64;UBERON:0010371,6.87e-17,73;UBERON:0002020,1.85e-16,34;UBERON:0000073,9.06e-16,54;UBERON:0001049,1.52e-15,52;UBERON:0005068,1.52e-15,52;UBERON:0006241,1.52e-15,52;UBERON:0007135,1.52e-15,52;UBERON:0004121,5.15e-15,95;UBERON:0000924,5.15e-15,95;UBERON:0006601,5.15e-15,95;UBERON:0003080,6.44e-15,40;UBERON:0002780,1.83e-14,39;UBERON:0001890,1.83e-14,39;UBERON:0006240,1.83e-14,39;UBERON:0001017,3.57e-14,73;UBERON:0010314,1.37e-13,92;UBERON:0003528,1.49e-13,29;UBERON:0002791,1.49e-13,29;UBERON:0001893,1.49e-13,29;UBERON:0000955,3.71e-13,47;UBERON:0006238,3.71e-13,47;UBERON:0001016,3.91e-13,75;UBERON:0002616,1.38e-12,46;UBERON:0000956,3.50e-10,21;UBERON:0001869,3.50e-10,21;UBERON:0000203,3.50e-10,21;UBERON:0000025,5.46e-08,114;UBERON:0002619,7.83e-08,17;UBERON:0004111,2.74e-07,122;UBERON:0002021,6.94e-07,10;UBERON:0000411,6.94e-07,10;UBERON:0001950,6.94e-07,10|phase1_expression=5.60520964866779,0.348975407639361,0,0,0,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,1.28629718017973,2.29226751951005,0.515672092277442,33.9891654244124,39.1453324661304,29.7900759647904,0,0,0,0,0,0,0,16.4866483570479,16.8757422914613,14.302097371894,5.99867067247988,6.62605622854841,18.9860738783179,21.6610764501214,11.0306254393203,2.20231761998777,2.80912143787413,5.68344173048101,34.5542073853108,30.7398482504096,29.6920621217353,1.11673199600552,3.37657566019008,3.81995619442025,21.2132581541041,16.657486653495,22.1815340532108,0.605809546665472,0.302286240427142,0.289864488701678,0,0,0.539703191637817,0,0,0.421333260395256,0.170430322578058,0.519572009205738,0,1.69012103732017,0,0,0,0,0,0,0,0,0,1.04091196059682,1.21786191324856,0,0.452167921657868,0.470354828542819,0.376999773989026,0,1.3013942122792,0,2.58826959915855,0.220841518460394,0.484875253135222,3.72783522436244,2.34224637609238,0.83778682725382,0.510914110417183,0,0,0,7.04016005202667,14.640019290196,17.591609295801,6.95297280769106,4.09144731728529,4.98691306942944,4.86723789203273,1.83310854930569,0.746441823660558,0.252722758433675,1.68353484709179,1.69156575851515,3.44853156650209,5.04173963454978,13.7141384230501,14.0835553243249,13.9643955110486,11.4316103962869,8.01980449290949,4.95806383745537,6.42960672570586,4.22282697993477,1.97276159184817,2.22437799380478,3.48252166522167,3.70407845534298,1.39323986772945,0,0,0,8.69928244649108,7.50483391939508,3.42117916775928,4.97163944728941,2.36117078096885,2.77680803197281,1.39520366850245,0.804820204198858,1.75148013550754,1.48103864922132,0.985004784474571,1.37816976227955,1.31579988682799,1.75640092232841,0.671032093801859,6.09840850835969,23.153537785339,0,0,6.39864751605702,7.89604684325491,5.28356591420583,3.02525286935014,2.44615848229357,0.951128130562796,1.89811624617805,0.823494773620054,1.00534083520108,2.58643413653496,1.55971269695296,0.898819408654221,0.432276099749388,1.7922714592893,0,0.799739588268102,1.1270773567308,0,0.387904974335251,0.350679099451593,0.316182685621286,0,0.156998727841375,0.123397163921801,0,2.50267658574141,1.57247196090562,0.449724224769707,0,0.482354319504834,0,0.575392274901621,0,0.5491228263761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| ||
|EntrezGene=12395 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=Q3UQX8 | |||
|association_with_transcript=50bp_to_NM_001111026,uc008sau.2_5end | |||
|description=CAGE_peak_2_at_Runx1t1_5end | |||
|id=chr4:13670499..13670526,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.26e-11!23;CL:0000337!2.26e-11!23;CL:0000540!9.93e-09!33;CL:0000047!9.93e-09!33;CL:0000031!9.93e-09!33;CL:0000404!9.93e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.38e-12,23;CL:0000337,2.38e-12,23;CL:0000540,5.06e-09,33;CL:0000047,5.06e-09,33;CL:0000031,5.06e-09,33;CL:0000404,5.06e-09,33;CL:0000393,9.69e-07,39;CL:0000211,9.69e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!3.18e-16!49;UBERON:0002020!1.12e-14!34;UBERON:0000033!1.85e-14!63;UBERON:0001049!5.77e-14!52;UBERON:0005068!5.77e-14!52;UBERON:0006241!5.77e-14!52;UBERON:0007135!5.77e-14!52;UBERON:0003080!2.50e-13!40;UBERON:0002346!5.16e-13!71;UBERON:0003075!5.16e-13!71;UBERON:0007284!5.16e-13!71;UBERON:0002780!6.43e-13!39;UBERON:0001890!6.43e-13!39;UBERON:0006240!6.43e-13!39;UBERON:0001017!8.75e-13!73;UBERON:0005743!8.75e-13!73;UBERON:0000073!2.92e-12!75;UBERON:0001016!2.92e-12!75;UBERON:0000955!3.32e-12!50;UBERON:0006238!3.32e-12!50;UBERON:0002791!4.72e-12!29;UBERON:0003528!4.72e-12!29;UBERON:0001893!4.72e-12!29;UBERON:0002616!1.09e-11!49;UBERON:0004121!1.32e-11!102;UBERON:0000924!1.32e-11!102;UBERON:0006601!1.32e-11!102;UBERON:0000468!9.73e-10!333;UBERON:0000956!5.42e-09!21;UBERON:0001869!5.42e-09!21;UBERON:0000203!5.42e-09!21;UBERON:0000025!3.94e-08!114;UBERON:0004111!1.04e-07!122;UBERON:0000922!2.35e-07!328;UBERON:0002619!7.08e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,4.13e-18,49;UBERON:0002346,3.20e-17,64;UBERON:0003075,3.20e-17,64;UBERON:0007284,3.20e-17,64;UBERON:0010371,6.87e-17,73;UBERON:0002020,1.85e-16,34;UBERON:0000073,9.06e-16,54;UBERON:0001049,1.52e-15,52;UBERON:0005068,1.52e-15,52;UBERON:0006241,1.52e-15,52;UBERON:0007135,1.52e-15,52;UBERON:0004121,5.15e-15,95;UBERON:0000924,5.15e-15,95;UBERON:0006601,5.15e-15,95;UBERON:0003080,6.44e-15,40;UBERON:0002780,1.83e-14,39;UBERON:0001890,1.83e-14,39;UBERON:0006240,1.83e-14,39;UBERON:0001017,3.57e-14,73;UBERON:0010314,1.37e-13,92;UBERON:0003528,1.49e-13,29;UBERON:0002791,1.49e-13,29;UBERON:0001893,1.49e-13,29;UBERON:0000955,3.71e-13,47;UBERON:0006238,3.71e-13,47;UBERON:0001016,3.91e-13,75;UBERON:0002616,1.38e-12,46;UBERON:0000956,3.50e-10,21;UBERON:0001869,3.50e-10,21;UBERON:0000203,3.50e-10,21;UBERON:0000025,5.46e-08,114;UBERON:0002619,7.83e-08,17;UBERON:0004111,2.74e-07,122;UBERON:0002021,6.94e-07,10;UBERON:0000411,6.94e-07,10;UBERON:0001950,6.94e-07,10 | |||
|phase1_expression=5.60520964866779,0.348975407639361,0,0,0,0.16787927191189,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,1.28629718017973,2.29226751951005,0.515672092277442,33.9891654244124,39.1453324661304,29.7900759647904,0,0,0,0,0,0,0,16.4866483570479,16.8757422914613,14.302097371894,5.99867067247988,6.62605622854841,18.9860738783179,21.6610764501214,11.0306254393203,2.20231761998777,2.80912143787413,5.68344173048101,34.5542073853108,30.7398482504096,29.6920621217353,1.11673199600552,3.37657566019008,3.81995619442025,21.2132581541041,16.657486653495,22.1815340532108,0.605809546665472,0.302286240427142,0.289864488701678,0,0,0.539703191637817,0,0,0.421333260395256,0.170430322578058,0.519572009205738,0,1.69012103732017,0,0,0,0,0,0,0,0,0,1.04091196059682,1.21786191324856,0,0.452167921657868,0.470354828542819,0.376999773989026,0,1.3013942122792,0,2.58826959915855,0.220841518460394,0.484875253135222,3.72783522436244,2.34224637609238,0.83778682725382,0.510914110417183,0,0,0,7.04016005202667,14.640019290196,17.591609295801,6.95297280769106,4.09144731728529,4.98691306942944,4.86723789203273,1.83310854930569,0.746441823660558,0.252722758433675,1.68353484709179,1.69156575851515,3.44853156650209,5.04173963454978,13.7141384230501,14.0835553243249,13.9643955110486,11.4316103962869,8.01980449290949,4.95806383745537,6.42960672570586,4.22282697993477,1.97276159184817,2.22437799380478,3.48252166522167,3.70407845534298,1.39323986772945,0,0,0,8.69928244649108,7.50483391939508,3.42117916775928,4.97163944728941,2.36117078096885,2.77680803197281,1.39520366850245,0.804820204198858,1.75148013550754,1.48103864922132,0.985004784474571,1.37816976227955,1.31579988682799,1.75640092232841,0.671032093801859,6.09840850835969,23.153537785339,0,0,6.39864751605702,7.89604684325491,5.28356591420583,3.02525286935014,2.44615848229357,0.951128130562796,1.89811624617805,0.823494773620054,1.00534083520108,2.58643413653496,1.55971269695296,0.898819408654221,0.432276099749388,1.7922714592893,0,0.799739588268102,1.1270773567308,0,0.387904974335251,0.350679099451593,0.316182685621286,0,0.156998727841375,0.123397163921801,0,2.50267658574141,1.57247196090562,0.449724224769707,0,0.482354319504834,0,0.575392274901621,0,0.549122826376163,0,1.11642284300551,0.312037673114561,0,0,0.482443521363367,2.21703828199926,5.30575952957357,7.82231886921724,4.41337223015489,3.98973422090454,6.53274404023081,4.28478553594825,1.95133647857799,7.25121662888479,3.98636441367795,4.14582398509466,2.62181303545181,3.45369963731791,2.74833211304872,0,0,0,0,2.56880943980467,1.40654023910644,1.3114795630134,1.00988370881749,0,0.780877488593277,1.07711698866399,1.19484398976276,1.78238939265915,1.41538265394416,0.404810701674894,2.33804686329049,1.58115111178609,12.8528526568723,0.141940085208269,1.24645922567079,1.14020871547503,3.95928295134085,0,5.82673526771955,1.81394134178851,1.88605079755898,2.36241514304618,2.45948118355142,2.32585463851399,3.27180356529755,2.85197902707777,1.8962205476149,0,0,7.14923172082955,2.88097750450096,1.29358683782755,3.00071849044229,4.07882537377229,3.21063871683727,3.1264313914403,1.522324745573,0.23467170806371,0.42366414172764,0.220528398054962,2.14352128823924,4.68246837418126,3.19658502119226,2.38744688006273,2.79039529566604,0.874442509889552,4.07935664423121,0.170870880797853,1.23832120777933,0.925972636848558,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,7.59206384594725,5.28630614529807,2.59212817972323,1.67270636811575,2.18362563746178,2.42755823492677,1.57041565878138,0.785267825952089,0.648074866458964,0,0,2.54178128274764,0.992750942742586,0.972255941720238,0.516639293910924,0.337912250981556,0.938857909166032,0.13020438484395,0.104859344425711,0,0.288030006257865,0,1.21635129174099,0.410843828659309,0.389762468933385,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.304827226619999,0.100826185136841,0.0974578807397524,0,0,1.36038230169127,0,0,0.167884616364078,2.51146472241848,0.563047426353546,1.83151624267265,0.428736758158132,0.501572104035363,20.8958181768315,13.3494318587081,13.7494923225455,7.73339320546594,10.9613203163303,12.0863023582352,5.40018000185445,10.3573876741571,11.7817026335893,8.80192529978094,7.26511433089237,21.5473431636557,14.1708892775931,7.77941494618541,8.80375283037526,6.80220981265052,8.22312892865976,6.38708677440572,6.73930340142812,5.30664144703975,7.85785829659743,7.54505365544305,8.14681114987977,5.76226371643823,8.09840112274147,9.0495801343784,6.83717523074647,5.78727661391115,5.35711671044299,7.94874168725746,6.51451579532289,5.85670160325814,5.7224685587357,5.52316383202848,7.24642229198046,6.00763716030903,5.85369513192872,6.83981249738391,6.3827933507555,5.61142271657738,6.05038592433288,4.92522411877817,5.72923460437565,7.12709469455443,6.55882477335881,15.2384452542147,6.08222181958062,5.58664740525576,1.7215949886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| |||
|short_description=p2@Runx1t1 | |||
}} |
Revision as of 04:10, 14 September 2013
Short description: | p2@Runx1t1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Runx1t1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 50bp_to_NM_001111026, uc008sau.2_5end |
EntrezGene: | Runx1t1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.38e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.38e-12 | 23 |
neuron | 5.06e-09 | 33 |
neuronal stem cell | 5.06e-09 | 33 |
neuroblast | 5.06e-09 | 33 |
electrically signaling cell | 5.06e-09 | 33 |
electrically responsive cell | 9.69e-07 | 39 |
electrically active cell | 9.69e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.