FFCP PHASE1:Mm9::chr12:28024271..28024279,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=100|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:28024271..28024279,-|id=chr12:28024271..28024279,-|ontology_enrichment_celltype=CL:0000540!2.50e-15!33;CL:0000047!2.50e-15!33;CL:0000031!2.50e-15!33;CL:0000404!2.50e-15!33;CL:0000221!2.42e-13!44;CL:0000133!2.42e-13!44;CL:0002319!6.23e-13!43;CL:0000393!3.83e-11!39;CL:0000211!3.83e-11!39;CL:0000117!2.28e-10!23;CL:0000337!2.28e-10!23;CL:0000055!3.15e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.91e-16,33;CL:0000047,1.91e-16,33;CL:0000031,1.91e-16,33;CL:0000404,1.91e-16,33;CL:0000221,3.97e-12,44;CL:0000133,3.97e-12,44;CL:0000393,4.29e-12,39;CL:0000211,4.29e-12,39;CL:0002319,1.21e-11,43;CL:0000117,2.86e-10,23;CL:0000337,2.86e-10,23;CL:0002609,4.56e-07,6;CL:0000107,7.80e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.52e-13!73;UBERON:0005743!5.52e-13!73;UBERON:0000073!8.46e-13!75;UBERON:0001016!8.46e-13!75;UBERON:0004121!2.72e-12!102;UBERON:0000924!2.72e-12!102;UBERON:0006601!2.72e-12!102;UBERON:0002346!4.66e-10!71;UBERON:0003075!4.66e-10!71;UBERON:0007284!4.66e-10!71;UBERON:0003056!5.35e-09!49;UBERON:0000468!2.44e-08!333;UBERON:0000033!3.96e-08!63;UBERON:0001049!1.74e-07!52;UBERON:0005068!1.74e-07!52;UBERON:0006241!1.74e-07!52;UBERON:0007135!1.74e-07!52;UBERON:0000922!4.12e-07!328;UBERON:0003080!4.36e-07!40;UBERON:0002780!4.87e-07!39;UBERON:0001890!4.87e-07!39;UBERON:0006240!4.87e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.33e-09,73;UBERON:0004121,7.16e-09,95;UBERON:0000924,7.16e-09,95;UBERON:0006601,7.16e-09,95;UBERON:0001016,9.87e-09,75;UBERON:0002346,2.57e-08,64;UBERON:0003075,2.57e-08,64;UBERON:0007284,2.57e-08,64;UBERON:0010371,4.29e-07,73;UBERON:0002410,7.80e-07,9|phase1_expression=7.52699581392532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01457859675027,0.439372365468944,0.777719596297134,0.699932108126813,0,0,0,0,0.257259436035947,0,0.515672092277442,57.862507805845,67.1818543675482,56.4109949120499,0.338844532069132,0,0,0,0,1.79760066311043,0.768436610643109,162.896380936618,204.39899063418,168.680619003808,1.99955689082663,1.98781686856452,112.446553679328,118.369156707522,86.406565941342,1.10115880999389,0.766124028511126,1.0752457327937,58.2937391767457,55.8989502410723,91.6807532179897,0.837548997004143,0.56276261003168,0.61119299110724,6.18720029494702,6.97621235915604,31.3151068986505,0.37863096666592,0.529000920747499,0,0,0,0,0,0,0,0.170430322578058,0,0,4.78867627240714,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0.11418387971906,0,0,2.4287945747259,1.82679286987285,2.07553947530453,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0.647067399789637,0,0,0,0.292780797011547,0,0,0,0,0,0.898743836428936,0.915001205637253,32.0418597887804,0.869121600961382,0.511430914660661,0.20778804455956,1.1356888414743,0.712875546952214,0.124406970610093,0,0,16.5252962562634,13.104419952708,7.56260945182467,8.59017461663576,5.44291993210623,5.63700369253339,4.96619140166563,0,10.3472636607764,9.8335161687266,6.68614271823006,6.79506770525482,6.39508673218875,0.348252166522167,1.64625709126355,8.16040493955822,0,0,0,1.86413195281952,2.34526059981096,2.52086886045421,1.42046841351126,0.787056926989615,1.54267112887378,0.930135779001631,0.804820204198858,0.817357396570186,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0.841159794256509,27.0639130557518,0,0,8.74481827194459,6.0381534683714,2.19074684247559,1.00841762311671,0.889512175379481,0.760902504450237,0,0.988193728344065,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0,3.41402221715547,5.02693455482807,3.38123207019241,4.88763186828754,3.68509725618489,2.66516115583211,0.316182685621286,0,0,0,0,0.667380422864376,0.589676985339609,0.674586337154561,0.405720242777006,0,0.25462585178142,0.575392274901621,0.486405680325106,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,1.10851914099963,3.22135400009824,1.62964976442026,1.86719594352707,1.40814148973101,0.837531287209079,1.6663054862021,0.780534591431195,0.945810864637146,2.21464689648775,0.797273843287435,2.29408640602033,1.55416483679306,2.16973587872267,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0.252470927204373,8.83423014365519,4.29482618726302,7.32439552291516,7.88597033243422,5.34716817797746,5.94460714656548,6.47697122679831,6.72188473196017,5.53402889125133,0.321321316421807,0,2.31485284767432,0.488660878060728,0,0,1.69946445308487,1.209294227859,1.13163047853539,0.295301892880773,0.922305443831782,0.516856586336442,0.363533729477506,0,0,0,0,1.70219802876894,13.1444598642856,9.31382523235832,7.93047029616891,3.3694644392032,5.35106452806212,5.75921572107423,1.8267896946876,0.23467170806371,0.42366414172764,0,0.16488625294148,0.484393280087717,0.422190474497091,0.238744688006273,0,0,0.18542530201051,0,2.27025554759545,0.370389054739423,0,0,0,0,0,0,0,6.95939185878498,1.82987520414164,1.83609079397062,0.418176592028937,0.655087691238533,0.404593039154462,0.330613822901344,0,0,0,0,4.03694674318743,4.30192075188454,1.75006069509643,1.6790777052105,0.844780627453891,0.821500670520278,0.39061315453185,0.209718688851422,0.241584120826006,0.288030006257865,0,1.62180172232131,0.410843828659309,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,2.74033007908257,0.755393897389701,0.675022500231806,0,0,0,36.9482957399669,16.7590446828433,13.6586884603307,5.83456120963906,11.528723944539,8.08911437180062,2.44471400581777,3.29656091582231,2.24643446714271,4.54854981174835,1.01391719956096,2.82939512079114,3.37109426891577,2.4969809437899,3.61843454420364,4.28664322154766,3.1288768005111,4.62982129112892,2.06042950401653,3.67997300335993,2.05721551431249,4.08194354166476,1.66905332963125,2.32554266611726,2.72917203204459,3.72304274723377,2.37806364734604,3.15683653725411,2.44447404922551,4.48913817326191,3.55905054372522,3.54616136552028,1.22769312950907,2.78886314134739,5.5942917184531,4.49659040288303,3.74290573512653,1.93383948643468,0.956441660344217,0.220591419119515,0.231867835620421|short_description=p@chr12:28024271..28024279,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=100 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:28024271..28024279,- | |||
|id=chr12:28024271..28024279,- | |||
|ontology_enrichment_celltype=CL:0000540!2.50e-15!33;CL:0000047!2.50e-15!33;CL:0000031!2.50e-15!33;CL:0000404!2.50e-15!33;CL:0000221!2.42e-13!44;CL:0000133!2.42e-13!44;CL:0002319!6.23e-13!43;CL:0000393!3.83e-11!39;CL:0000211!3.83e-11!39;CL:0000117!2.28e-10!23;CL:0000337!2.28e-10!23;CL:0000055!3.15e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.91e-16,33;CL:0000047,1.91e-16,33;CL:0000031,1.91e-16,33;CL:0000404,1.91e-16,33;CL:0000221,3.97e-12,44;CL:0000133,3.97e-12,44;CL:0000393,4.29e-12,39;CL:0000211,4.29e-12,39;CL:0002319,1.21e-11,43;CL:0000117,2.86e-10,23;CL:0000337,2.86e-10,23;CL:0002609,4.56e-07,6;CL:0000107,7.80e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.52e-13!73;UBERON:0005743!5.52e-13!73;UBERON:0000073!8.46e-13!75;UBERON:0001016!8.46e-13!75;UBERON:0004121!2.72e-12!102;UBERON:0000924!2.72e-12!102;UBERON:0006601!2.72e-12!102;UBERON:0002346!4.66e-10!71;UBERON:0003075!4.66e-10!71;UBERON:0007284!4.66e-10!71;UBERON:0003056!5.35e-09!49;UBERON:0000468!2.44e-08!333;UBERON:0000033!3.96e-08!63;UBERON:0001049!1.74e-07!52;UBERON:0005068!1.74e-07!52;UBERON:0006241!1.74e-07!52;UBERON:0007135!1.74e-07!52;UBERON:0000922!4.12e-07!328;UBERON:0003080!4.36e-07!40;UBERON:0002780!4.87e-07!39;UBERON:0001890!4.87e-07!39;UBERON:0006240!4.87e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.33e-09,73;UBERON:0004121,7.16e-09,95;UBERON:0000924,7.16e-09,95;UBERON:0006601,7.16e-09,95;UBERON:0001016,9.87e-09,75;UBERON:0002346,2.57e-08,64;UBERON:0003075,2.57e-08,64;UBERON:0007284,2.57e-08,64;UBERON:0010371,4.29e-07,73;UBERON:0002410,7.80e-07,9 | |||
|phase1_expression=7.52699581392532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01457859675027,0.439372365468944,0.777719596297134,0.699932108126813,0,0,0,0,0.257259436035947,0,0.515672092277442,57.862507805845,67.1818543675482,56.4109949120499,0.338844532069132,0,0,0,0,1.79760066311043,0.768436610643109,162.896380936618,204.39899063418,168.680619003808,1.99955689082663,1.98781686856452,112.446553679328,118.369156707522,86.406565941342,1.10115880999389,0.766124028511126,1.0752457327937,58.2937391767457,55.8989502410723,91.6807532179897,0.837548997004143,0.56276261003168,0.61119299110724,6.18720029494702,6.97621235915604,31.3151068986505,0.37863096666592,0.529000920747499,0,0,0,0,0,0,0,0.170430322578058,0,0,4.78867627240714,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0.11418387971906,0,0,2.4287945747259,1.82679286987285,2.07553947530453,0.301445281105245,0.470354828542819,0,0.247194967734374,0,0,0.647067399789637,0,0,0,0.292780797011547,0,0,0,0,0,0.898743836428936,0.915001205637253,32.0418597887804,0.869121600961382,0.511430914660661,0.20778804455956,1.1356888414743,0.712875546952214,0.124406970610093,0,0,16.5252962562634,13.104419952708,7.56260945182467,8.59017461663576,5.44291993210623,5.63700369253339,4.96619140166563,0,10.3472636607764,9.8335161687266,6.68614271823006,6.79506770525482,6.39508673218875,0.348252166522167,1.64625709126355,8.16040493955822,0,0,0,1.86413195281952,2.34526059981096,2.52086886045421,1.42046841351126,0.787056926989615,1.54267112887378,0.930135779001631,0.804820204198858,0.817357396570186,0.329119699826961,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0.841159794256509,27.0639130557518,0,0,8.74481827194459,6.0381534683714,2.19074684247559,1.00841762311671,0.889512175379481,0.760902504450237,0,0.988193728344065,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0,3.41402221715547,5.02693455482807,3.38123207019241,4.88763186828754,3.68509725618489,2.66516115583211,0.316182685621286,0,0,0,0,0.667380422864376,0.589676985339609,0.674586337154561,0.405720242777006,0,0.25462585178142,0.575392274901621,0.486405680325106,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0,1.10851914099963,3.22135400009824,1.62964976442026,1.86719594352707,1.40814148973101,0.837531287209079,1.6663054862021,0.780534591431195,0.945810864637146,2.21464689648775,0.797273843287435,2.29408640602033,1.55416483679306,2.16973587872267,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0.252470927204373,8.83423014365519,4.29482618726302,7.32439552291516,7.88597033243422,5.34716817797746,5.94460714656548,6.47697122679831,6.72188473196017,5.53402889125133,0.321321316421807,0,2.31485284767432,0.488660878060728,0,0,1.69946445308487,1.209294227859,1.13163047853539,0.295301892880773,0.922305443831782,0.516856586336442,0.363533729477506,0,0,0,0,1.70219802876894,13.1444598642856,9.31382523235832,7.93047029616891,3.3694644392032,5.35106452806212,5.75921572107423,1.8267896946876,0.23467170806371,0.42366414172764,0,0.16488625294148,0.484393280087717,0.422190474497091,0.238744688006273,0,0,0.18542530201051,0,2.27025554759545,0.370389054739423,0,0,0,0,0,0,0,6.95939185878498,1.82987520414164,1.83609079397062,0.418176592028937,0.655087691238533,0.404593039154462,0.330613822901344,0,0,0,0,4.03694674318743,4.30192075188454,1.75006069509643,1.6790777052105,0.844780627453891,0.821500670520278,0.39061315453185,0.209718688851422,0.241584120826006,0.288030006257865,0,1.62180172232131,0.410843828659309,0.25984164595559,0,0.198681354781265,0,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,2.74033007908257,0.755393897389701,0.675022500231806,0,0,0,36.9482957399669,16.7590446828433,13.6586884603307,5.83456120963906,11.528723944539,8.08911437180062,2.44471400581777,3.29656091582231,2.24643446714271,4.54854981174835,1.01391719956096,2.82939512079114,3.37109426891577,2.4969809437899,3.61843454420364,4.28664322154766,3.1288768005111,4.62982129112892,2.06042950401653,3.67997300335993,2.05721551431249,4.08194354166476,1.66905332963125,2.32554266611726,2.72917203204459,3.72304274723377,2.37806364734604,3.15683653725411,2.44447404922551,4.48913817326191,3.55905054372522,3.54616136552028,1.22769312950907,2.78886314134739,5.5942917184531,4.49659040288303,3.74290573512653,1.93383948643468,0.956441660344217,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr12:28024271..28024279,- | |||
}} |
Revision as of 22:39, 12 September 2013
Short description: | p@chr12:28024271..28024279, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28024271..28024279, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.91e-16 | 33 |
neuronal stem cell | 1.91e-16 | 33 |
neuroblast | 1.91e-16 | 33 |
electrically signaling cell | 1.91e-16 | 33 |
ectodermal cell | 3.97e-12 | 44 |
neurectodermal cell | 3.97e-12 | 44 |
electrically responsive cell | 4.29e-12 | 39 |
electrically active cell | 4.29e-12 | 39 |
neural cell | 1.21e-11 | 43 |
CNS neuron (sensu Vertebrata) | 2.86e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.86e-10 | 23 |
neuron of cerebral cortex | 4.56e-07 | 6 |
autonomic neuron | 7.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.33e-09 | 73 |
ectoderm-derived structure | 7.16e-09 | 95 |
ectoderm | 7.16e-09 | 95 |
presumptive ectoderm | 7.16e-09 | 95 |
nervous system | 9.87e-09 | 75 |
neurectoderm | 2.57e-08 | 64 |
neural plate | 2.57e-08 | 64 |
presumptive neural plate | 2.57e-08 | 64 |
ecto-epithelium | 4.29e-07 | 73 |
autonomic nervous system | 7.80e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.