FFCP PHASE1:Mm9::chr11:109159404..109159432,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19739|HGNC=|MCL_coexpression_id=2594|UniProt=A2A6V9|association_with_transcript=0bp_to_ENSMUST00000106704_5end|description=CAGE_peak_2_at_Rgs9_5end|id=chr11:109159404..109159432,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.47e-15!71;UBERON:0003075!4.47e-15!71;UBERON:0007284!4.47e-15!71;UBERON:0003056!8.86e-14!49;UBERON:0004121!1.31e-13!102;UBERON:0000924!1.31e-13!102;UBERON:0006601!1.31e-13!102;UBERON:0000033!7.94e-13!63;UBERON:0001017!2.64e-12!73;UBERON:0005743!2.64e-12!73;UBERON:0000073!3.46e-12!75;UBERON:0001016!3.46e-12!75;UBERON:0001049!3.50e-11!52;UBERON:0005068!3.50e-11!52;UBERON:0006241!3.50e-11!52;UBERON:0007135!3.50e-11!52;UBERON:0003080!8.03e-10!40;UBERON:0002780!2.60e-09!39;UBERON:0001890!2.60e-09!39;UBERON:0006240!2.60e-09!39;UBERON:0000955!3.94e-09!50;UBERON:0006238!3.94e-09!50;UBERON:0002616!8.66e-09!49;UBERON:0000153!8.74e-08!94;UBERON:0002020!7.73e-07!34;UBERON:0000468!9.35e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.10e-17,64;UBERON:0003075,1.10e-17,64;UBERON:0007284,1.10e-17,64;UBERON:0010371,2.55e-15,73;UBERON:0003056,4.16e-15,49;UBERON:0004121,2.05e-13,95;UBERON:0000924,2.05e-13,95;UBERON:0006601,2.05e-13,95;UBERON:0001017,4.47e-13,73;UBERON:0001016,1.34e-12,75;UBERON:0001049,3.83e-12,52;UBERON:0005068,3.83e-12,52;UBERON:0006241,3.83e-12,52;UBERON:0007135,3.83e-12,52;UBERON:0000073,1.08e-11,54;UBERON:0003080,1.13e-10,40;UBERON:0002780,4.18e-10,39;UBERON:0001890,4.18e-10,39;UBERON:0006240,4.18e-10,39;UBERON:0000955,6.34e-10,47;UBERON:0006238,6.34e-10,47;UBERON:0002616,1.54e-09,46;UBERON:0010314,2.62e-08,92;UBERON:0002020,2.40e-07,34;UBERON:0001894,4.54e-07,10;UBERON:0006222,4.54e-07,10|phase1_expression=3.36312578920067,0.348975407639361,0,0,0,0.839396359559449,1.16806320297763,1.54947988129892,0,0.70219357896598,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,7.82398269389842,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,1.09012578190223,0,0.777719596297134,0.419959264876088,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0.286533439938757,0.515672092277442,3.43937983461316,4.23192783417626,1.26766280701236,0,0,0,0,0,0.299600110518405,1.92109152660777,1.97010263386108,1.21505344498522,0.841299845405528,5.42736870367227,3.3130281142742,1.22490799214954,1.0543001812006,0,1.10115880999389,2.042997409363,1.22885226604995,3.03338461779446,3.29355516968675,1.04182674111352,1.95428099300967,6.19038871034848,3.66715794664344,5.30331453852602,7.97281412474976,3.54158947068071,0.984440513331393,1.51143120213571,0,0.860423876981386,0,0,0,0.896053774194671,0.983110940922263,0,0,0,4.50698943285378,0,0,0,0,0,0,1.25602267690966,0.517875767294343,1.7813056687779,1.04091196059682,1.82679286987285,0.691846491768175,0.60289056221049,1.88141931417128,0.376999773989026,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,0.292780797011547,0.628340120440365,1.78819938646014,0.479260498023681,0,0.254140454146129,7.78911324905078,209.535276090931,10.8062742817063,17.2086076990354,16.3657892691412,16.4152555202052,62.7873688072222,1.73126918545538,6.09594155989456,27.7995034277042,35.5646736448141,2.73252930221678,2.06911893990126,2.34080768746954,5.42537344208574,13.9474823260222,14.6049641124729,13.0245397138023,117.710033686252,2.37124792226126,3.02569728268511,3.16712023495108,1.7535658594206,4.17070873838397,3.1342694986995,4.11564272815887,0.199034266818493,0,0,0,0,0.938104239924385,0.180062061461015,0.710234206755631,0.590292695242212,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0.822799249567402,0.820837320395476,0.486412857275134,0.146199987425332,0.439100230582101,0.268412837520744,4.20579897128254,4.32199371992995,0,3.43785736662608,2.34617075588757,2.32236671860439,3.60828891701861,3.22693639397348,5.55945109612176,3.99473814836374,6.16887780007865,5.10566759644434,7.28872105520782,6.16765063327568,6.23885078781184,3.59527763461689,2.16138049874694,2.19055400579804,0.379335801906163,0.799739588268102,1.1270773567308,1.22190796707189,1.16371492300575,0.631222379012867,0.632365371242573,3.09981310757165,2.04098346193787,1.72756029490521,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,0,0.744281895337007,0.312037673114561,0.757736633841335,0.179397413521912,0.482443521363367,11.0851914099963,0.757965647081939,0.814824882210129,1.01847051465113,1.64283173801951,1.84256883185997,1.6663054862021,1.75620283072019,7.25121662888479,6.64394068946325,4.30527875375215,11.3065687153859,6.38934432903814,7.08780387049407,0,0,0.983528546038072,0.275936746304732,4.33486592967038,3.16471553798949,0,0.252470927204373,2.83957397474631,2.73307121007647,3.87762115919038,0.477937595905104,2.45078541490634,0.566153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| ||
|EntrezGene=19739 | |||
|HGNC= | |||
|MCL_coexpression_id=2594 | |||
|UniProt=A2A6V9 | |||
|association_with_transcript=0bp_to_ENSMUST00000106704_5end | |||
|description=CAGE_peak_2_at_Rgs9_5end | |||
|id=chr11:109159404..109159432,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.47e-15!71;UBERON:0003075!4.47e-15!71;UBERON:0007284!4.47e-15!71;UBERON:0003056!8.86e-14!49;UBERON:0004121!1.31e-13!102;UBERON:0000924!1.31e-13!102;UBERON:0006601!1.31e-13!102;UBERON:0000033!7.94e-13!63;UBERON:0001017!2.64e-12!73;UBERON:0005743!2.64e-12!73;UBERON:0000073!3.46e-12!75;UBERON:0001016!3.46e-12!75;UBERON:0001049!3.50e-11!52;UBERON:0005068!3.50e-11!52;UBERON:0006241!3.50e-11!52;UBERON:0007135!3.50e-11!52;UBERON:0003080!8.03e-10!40;UBERON:0002780!2.60e-09!39;UBERON:0001890!2.60e-09!39;UBERON:0006240!2.60e-09!39;UBERON:0000955!3.94e-09!50;UBERON:0006238!3.94e-09!50;UBERON:0002616!8.66e-09!49;UBERON:0000153!8.74e-08!94;UBERON:0002020!7.73e-07!34;UBERON:0000468!9.35e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.10e-17,64;UBERON:0003075,1.10e-17,64;UBERON:0007284,1.10e-17,64;UBERON:0010371,2.55e-15,73;UBERON:0003056,4.16e-15,49;UBERON:0004121,2.05e-13,95;UBERON:0000924,2.05e-13,95;UBERON:0006601,2.05e-13,95;UBERON:0001017,4.47e-13,73;UBERON:0001016,1.34e-12,75;UBERON:0001049,3.83e-12,52;UBERON:0005068,3.83e-12,52;UBERON:0006241,3.83e-12,52;UBERON:0007135,3.83e-12,52;UBERON:0000073,1.08e-11,54;UBERON:0003080,1.13e-10,40;UBERON:0002780,4.18e-10,39;UBERON:0001890,4.18e-10,39;UBERON:0006240,4.18e-10,39;UBERON:0000955,6.34e-10,47;UBERON:0006238,6.34e-10,47;UBERON:0002616,1.54e-09,46;UBERON:0010314,2.62e-08,92;UBERON:0002020,2.40e-07,34;UBERON:0001894,4.54e-07,10;UBERON:0006222,4.54e-07,10 | |||
|phase1_expression=3.36312578920067,0.348975407639361,0,0,0,0.839396359559449,1.16806320297763,1.54947988129892,0,0.70219357896598,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,7.82398269389842,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0.665191531965914,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0,0,1.09012578190223,0,0.777719596297134,0.419959264876088,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0.286533439938757,0.515672092277442,3.43937983461316,4.23192783417626,1.26766280701236,0,0,0,0,0,0.299600110518405,1.92109152660777,1.97010263386108,1.21505344498522,0.841299845405528,5.42736870367227,3.3130281142742,1.22490799214954,1.0543001812006,0,1.10115880999389,2.042997409363,1.22885226604995,3.03338461779446,3.29355516968675,1.04182674111352,1.95428099300967,6.19038871034848,3.66715794664344,5.30331453852602,7.97281412474976,3.54158947068071,0.984440513331393,1.51143120213571,0,0.860423876981386,0,0,0,0.896053774194671,0.983110940922263,0,0,0,4.50698943285378,0,0,0,0,0,0,1.25602267690966,0.517875767294343,1.7813056687779,1.04091196059682,1.82679286987285,0.691846491768175,0.60289056221049,1.88141931417128,0.376999773989026,0,0.433798070759735,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,0.292780797011547,0.628340120440365,1.78819938646014,0.479260498023681,0,0.254140454146129,7.78911324905078,209.535276090931,10.8062742817063,17.2086076990354,16.3657892691412,16.4152555202052,62.7873688072222,1.73126918545538,6.09594155989456,27.7995034277042,35.5646736448141,2.73252930221678,2.06911893990126,2.34080768746954,5.42537344208574,13.9474823260222,14.6049641124729,13.0245397138023,117.710033686252,2.37124792226126,3.02569728268511,3.16712023495108,1.7535658594206,4.17070873838397,3.1342694986995,4.11564272815887,0.199034266818493,0,0,0,0,0.938104239924385,0.180062061461015,0.710234206755631,0.590292695242212,0.154267112887378,0.232533944750408,0.536546802799238,0.350296027101508,0.822799249567402,0.820837320395476,0.486412857275134,0.146199987425332,0.439100230582101,0.268412837520744,4.20579897128254,4.32199371992995,0,3.43785736662608,2.34617075588757,2.32236671860439,3.60828891701861,3.22693639397348,5.55945109612176,3.99473814836374,6.16887780007865,5.10566759644434,7.28872105520782,6.16765063327568,6.23885078781184,3.59527763461689,2.16138049874694,2.19055400579804,0.379335801906163,0.799739588268102,1.1270773567308,1.22190796707189,1.16371492300575,0.631222379012867,0.632365371242573,3.09981310757165,2.04098346193787,1.72756029490521,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,0,0.744281895337007,0.312037673114561,0.757736633841335,0.179397413521912,0.482443521363367,11.0851914099963,0.757965647081939,0.814824882210129,1.01847051465113,1.64283173801951,1.84256883185997,1.6663054862021,1.75620283072019,7.25121662888479,6.64394068946325,4.30527875375215,11.3065687153859,6.38934432903814,7.08780387049407,0,0,0.983528546038072,0.275936746304732,4.33486592967038,3.16471553798949,0,0.252470927204373,2.83957397474631,2.73307121007647,3.87762115919038,0.477937595905104,2.45078541490634,0.566153061577665,1.61924280669958,5.55286130031493,2.76701444562566,3.85585579706168,1.13552068166615,1.06839362200353,1.46598263418218,10.8880281161873,0,0.242780636154981,1.209294227859,0.943025398779491,0.885905678642318,2.45948118355142,0.516856586336442,0.363533729477506,0.356497378384721,3.47640433729398,0,0,33.3630813638712,2.88097750450096,2.19909762430683,6.00143698088458,8.6896714484714,5.52943334566419,11.1893334009442,17.0500371504176,0.469343416127421,0.42366414172764,3.96951116498931,0.98931751764888,0.807322133479528,1.44751019827574,1.07435109602823,0.984845398470368,4.95517422270746,3.33765543618917,0.683483523191411,1.03193433981611,0.740778109478847,0.188368457004691,0.683471138605126,0.915112692826091,1.35982743995084,1.25956307091292,1.79659965945751,0,0.790839983952838,1.21991680276109,1.29606408986162,1.25452977608681,2.18362563746178,3.2367443132357,3.30613822901344,1.57053565190418,2.98114438571124,0.621339313086926,0,0.149516546043979,0.330916980914195,0.972255941720238,0.387479470433193,0.337912250981556,0.469428954583016,0.651021924219751,0.104859344425711,0.241584120826006,0.576060012515731,0.316011120628178,2.43270258348197,3.69759445793378,1.81889152168913,1.79026695667481,0.993406773906324,0.360586348559907,0.443068581523732,0.201932899896295,0.381034033274999,0.806609481094724,0.487289403698762,0.192423683280659,0.467507608726276,0.226730383615211,0,0,0,1.54551675225752,4.31669693537719,4.2124873581471,1.50057865355346,3.51100472824754,1.6942555278512,2.30162618253588,2.86447756719698,2.57779773515531,4.7955776383945,4.5323633843382,2.70009000092722,2.2516060161211,5.89085131679466,2.5888015587591,1.14166082342594,1.99512436700516,1.87806966329548,1.21553358534147,1.46729213839588,2.02227859295016,2.44471400581777,1.85431551515005,2.567353676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| |||
|short_description=p2@Rgs9 | |||
}} |
Revision as of 18:37, 12 September 2013
Short description: | p2@Rgs9 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rgs9_5end |
Coexpression cluster: | MCL_coexpression_mm9:2594 |
Association with transcript: | 0bp_to_ENSMUST00000106704_5end |
EntrezGene: | Rgs9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.10e-17 | 64 |
neural plate | 1.10e-17 | 64 |
presumptive neural plate | 1.10e-17 | 64 |
ecto-epithelium | 2.55e-15 | 73 |
pre-chordal neural plate | 4.16e-15 | 49 |
ectoderm-derived structure | 2.05e-13 | 95 |
ectoderm | 2.05e-13 | 95 |
presumptive ectoderm | 2.05e-13 | 95 |
central nervous system | 4.47e-13 | 73 |
nervous system | 1.34e-12 | 75 |
neural tube | 3.83e-12 | 52 |
neural rod | 3.83e-12 | 52 |
future spinal cord | 3.83e-12 | 52 |
neural keel | 3.83e-12 | 52 |
regional part of nervous system | 1.08e-11 | 54 |
anterior neural tube | 1.13e-10 | 40 |
regional part of forebrain | 4.18e-10 | 39 |
forebrain | 4.18e-10 | 39 |
future forebrain | 4.18e-10 | 39 |
brain | 6.34e-10 | 47 |
future brain | 6.34e-10 | 47 |
regional part of brain | 1.54e-09 | 46 |
structure with developmental contribution from neural crest | 2.62e-08 | 92 |
gray matter | 2.40e-07 | 34 |
diencephalon | 4.54e-07 | 10 |
future diencephalon | 4.54e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.