FFCP PHASE1:Mm9::chr2:4480788..4480801,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=209630|HGNC=|UniProt=Q3TB04|association_with_transcript=0bp_to_ENSMUST00000153160,NM_001177844,uc008iet.2,uc008ieu.2,uc008iev.2_5end|description=CAGE_peak_9_at_Frmd4a_5end|id=chr2:4480788..4480801,+|ontology_enrichment_celltype=CL:0000107!4.36e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,9.98e-10,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.84e-08!11;UBERON:0002410!4.36e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.50e-12,11;UBERON:0002410,9.98e-10,9;UBERON:0005157,4.49e-07,20|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0.258246646883153,0,0,0,0.0797721589953364,0,0.0874204024189974,0.999329285446988,0.404950534779652,2.09868563438444,0.157731082679119,0.274228867211478,0.42438965179803,0.595303031057488,0.297872853602656,0.522399578277871,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0.635030673459631,1.84519436275371,0,0.288851619751275,0.166234645358492,1.02084678131185,0,0,0.523523743973798,0,0,0,0.503587271902309,0.202753862439029,0.550640256485045,0,0.218025156380447,0.439372365468944,0.58328969722285,0.699932108126813,2.87505128729943,0.335565212115473,1.45072428402269,1.00828139742739,3.60163210450326,1.43266719969378,0.515672092277442,0.404632921719196,0.528990979272033,0,0.338844532069132,0.889294796111139,1.7997994345628,1.97773272513395,1.4209602298922,0.599200221036809,0.384218305321555,0.725827286159344,0.405017814995072,0.420649922702764,0,0,0.367472397644862,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.284743361598206,0.186399445825301,16.5840363399673,9.21973033302783,3.18850937571846,0,1.3599426674155,0,0.649776417447669,0.448026887097336,0.140444420131752,0.681721290312231,0.259786004602869,0.35333957451034,1.12674735821344,0,0,0,0.432982082022428,0,0,0.45673551887624,1.8125651855302,0.29688427812965,0.693941307064543,0.608930956624282,0.691846491768175,0.904335843315735,1.88141931417128,0.251333182659351,0.988779870937496,0.578397427679647,0.884610551949874,0.970601099684455,0,0.969750506270444,0,0.292780797011547,0,0,0.718890747035522,0,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0.611036183101898,0.497627882440372,1.26361379216837,0,0.390361328888111,0,1.80062129805349,3.0140963567143,4.08218994907967,2.17793324484245,2.24884138943349,0.258703370739016,2.80238390812695,1.32374256117473,1.40760899331159,0.876782929710299,0.556094498451196,1.39300866608867,1.02891068203972,0.59710280045548,1.40442637462647,0.772043721344145,1.13665399758237,0.621377317606506,0.938104239924385,0.540186184383045,1.18372367792605,1.37734962223183,0.617068451549513,0.465067889500816,1.3413670069981,1.16765342367169,1.31647879930784,1.31333971263276,1.21603214318784,1.16959989940266,0.658650345873152,0.939444931322602,0,0.308713837137853,0.660837565967596,0.264450566663544,1.2797295032114,1.39342003116263,1.28867461322093,0,0.22237804384487,0.570676878337677,0.474529061544512,0.988193728344065,0.502670417600539,0.596869416123452,0.58489226135736,0,0.864552199498777,0.398282546508734,2.0863469104839,2.62771579002376,2.25415471346161,2.64746726198909,4.07300223052014,3.64706263429657,2.78240763346732,1.77132177575523,1.72698600625512,1.85095745882701,0.592905254174298,1.50160595144485,0.786235980452812,0.674586337154561,0.405720242777006,0.72353147925725,1.01850340712568,1.72617682470486,1.13494658742525,0.549122826376163,2.87536413054709,2.23284568601102,0.936113019343682,0.505157755894224,0,0.964887042726734,1.47802552133284,1.13694847062291,1.46668478797823,0.678980343100753,1.17345124144251,2.34508760418542,3.33261097240419,3.12213836572478,1.7339865851681,0.44292937929755,2.71073106717728,1.80249646187312,2.76295970985433,2.02508682014116,3.01582567878545,5.4390568381871,0,0.275936746304732,0,0,0.655739781506702,1.00988370881749,11.6738041184015,9.37052986311932,9.90947629570875,4.30143836314594,2.45078541490634,1.98153571552183,7.69140333182299,10.2289550268959,10.2774822266096,0.321321316421807,0.709700426041343,0.534196811001766,0,0.824850614862677,0,2.18502572539483,0.906970670894253,0.943025398779491,0,0.614870295887855,0.516856586336442,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,1.08036656418786,0.646793418913773,0.857348140126369,0.709360934569094,2.14042581122485,1.48094118541909,1.2178597964584,2.3467170806371,1.69465656691056,0.220528398054962,1.97863503529776,1.93757312035087,1.86970067277283,2.50681922406587,2.1338316966858,0.291480836629851,0,1.36696704638282,0.619160603889667,0.370389054739423,0,0.683471138605126,0.228778173206523,0.339956859987711,0.979660166265606,0.138199973804424,0,1.26534397432454,2.23651413839534,0.432021363287205,0,1.09181281873089,0.269728692769641,0.578574190077352,1.04702376793612,0.388844919875379,0,0,0.747582730219894,0.330916980914195,0.194451188344048,0.258319646955462,1.520605129417,0.821500670520278,1.3020438484395,0.314578033277133,0,0,2.52808896502543,3.44632865993279,4.41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| ||
|EntrezGene=209630 | |||
|HGNC= | |||
|UniProt=Q3TB04 | |||
|association_with_transcript=0bp_to_ENSMUST00000153160,NM_001177844,uc008iet.2,uc008ieu.2,uc008iev.2_5end | |||
|description=CAGE_peak_9_at_Frmd4a_5end | |||
|id=chr2:4480788..4480801,+ | |||
|ontology_enrichment_celltype=CL:0000107!4.36e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,9.98e-10,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.84e-08!11;UBERON:0002410!4.36e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.50e-12,11;UBERON:0002410,9.98e-10,9;UBERON:0005157,4.49e-07,20 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0.258246646883153,0,0,0,0.0797721589953364,0,0.0874204024189974,0.999329285446988,0.404950534779652,2.09868563438444,0.157731082679119,0.274228867211478,0.42438965179803,0.595303031057488,0.297872853602656,0.522399578277871,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0.635030673459631,1.84519436275371,0,0.288851619751275,0.166234645358492,1.02084678131185,0,0,0.523523743973798,0,0,0,0.503587271902309,0.202753862439029,0.550640256485045,0,0.218025156380447,0.439372365468944,0.58328969722285,0.699932108126813,2.87505128729943,0.335565212115473,1.45072428402269,1.00828139742739,3.60163210450326,1.43266719969378,0.515672092277442,0.404632921719196,0.528990979272033,0,0.338844532069132,0.889294796111139,1.7997994345628,1.97773272513395,1.4209602298922,0.599200221036809,0.384218305321555,0.725827286159344,0.405017814995072,0.420649922702764,0,0,0.367472397644862,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.284743361598206,0.186399445825301,16.5840363399673,9.21973033302783,3.18850937571846,0,1.3599426674155,0,0.649776417447669,0.448026887097336,0.140444420131752,0.681721290312231,0.259786004602869,0.35333957451034,1.12674735821344,0,0,0,0.432982082022428,0,0,0.45673551887624,1.8125651855302,0.29688427812965,0.693941307064543,0.608930956624282,0.691846491768175,0.904335843315735,1.88141931417128,0.251333182659351,0.988779870937496,0.578397427679647,0.884610551949874,0.970601099684455,0,0.969750506270444,0,0.292780797011547,0,0,0.718890747035522,0,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0.611036183101898,0.497627882440372,1.26361379216837,0,0.390361328888111,0,1.80062129805349,3.0140963567143,4.08218994907967,2.17793324484245,2.24884138943349,0.258703370739016,2.80238390812695,1.32374256117473,1.40760899331159,0.876782929710299,0.556094498451196,1.39300866608867,1.02891068203972,0.59710280045548,1.40442637462647,0.772043721344145,1.13665399758237,0.621377317606506,0.938104239924385,0.540186184383045,1.18372367792605,1.37734962223183,0.617068451549513,0.465067889500816,1.3413670069981,1.16765342367169,1.31647879930784,1.31333971263276,1.21603214318784,1.16959989940266,0.658650345873152,0.939444931322602,0,0.308713837137853,0.660837565967596,0.264450566663544,1.2797295032114,1.39342003116263,1.28867461322093,0,0.22237804384487,0.570676878337677,0.474529061544512,0.988193728344065,0.502670417600539,0.596869416123452,0.58489226135736,0,0.864552199498777,0.398282546508734,2.0863469104839,2.62771579002376,2.25415471346161,2.64746726198909,4.07300223052014,3.64706263429657,2.78240763346732,1.77132177575523,1.72698600625512,1.85095745882701,0.592905254174298,1.50160595144485,0.786235980452812,0.674586337154561,0.405720242777006,0.72353147925725,1.01850340712568,1.72617682470486,1.13494658742525,0.549122826376163,2.87536413054709,2.23284568601102,0.936113019343682,0.505157755894224,0,0.964887042726734,1.47802552133284,1.13694847062291,1.46668478797823,0.678980343100753,1.17345124144251,2.34508760418542,3.33261097240419,3.12213836572478,1.7339865851681,0.44292937929755,2.71073106717728,1.80249646187312,2.76295970985433,2.02508682014116,3.01582567878545,5.4390568381871,0,0.275936746304732,0,0,0.655739781506702,1.00988370881749,11.6738041184015,9.37052986311932,9.90947629570875,4.30143836314594,2.45078541490634,1.98153571552183,7.69140333182299,10.2289550268959,10.2774822266096,0.321321316421807,0.709700426041343,0.534196811001766,0,0.824850614862677,0,2.18502572539483,0.906970670894253,0.943025398779491,0,0.614870295887855,0.516856586336442,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,1.08036656418786,0.646793418913773,0.857348140126369,0.709360934569094,2.14042581122485,1.48094118541909,1.2178597964584,2.3467170806371,1.69465656691056,0.220528398054962,1.97863503529776,1.93757312035087,1.86970067277283,2.50681922406587,2.1338316966858,0.291480836629851,0,1.36696704638282,0.619160603889667,0.370389054739423,0,0.683471138605126,0.228778173206523,0.339956859987711,0.979660166265606,0.138199973804424,0,1.26534397432454,2.23651413839534,0.432021363287205,0,1.09181281873089,0.269728692769641,0.578574190077352,1.04702376793612,0.388844919875379,0,0,0.747582730219894,0.330916980914195,0.194451188344048,0.258319646955462,1.520605129417,0.821500670520278,1.3020438484395,0.314578033277133,0,0,2.52808896502543,3.44632865993279,4.41657115808757,2.20865399062252,3.58053391334963,3.77494574084403,0.721172697119813,0.886137163047463,1.21159739937777,0.762068066549998,1.41156659191577,0.584747284438515,0.769694733122636,0.467507608726276,0.453460767230423,0.443971906748129,0.538283139656854,1.00730769818447,0.772758376128762,0.563047426353546,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,1.14166082342594,1.99512436700516,0.682934423016537,0.972426868273176,0.838452650511929,0.735374033800057,0.44449345560323,0.618105171716683,1.28367683836726,1.010788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| |||
|short_description=p9@Frmd4a | |||
}} | |||
Revision as of 00:02, 14 September 2013
| Short description: | p9@Frmd4a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_9_at_Frmd4a_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000153160, NM_001177844, uc008iet.2, uc008ieu.2, uc008iev.2_5end |
| EntrezGene: | Frmd4a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 9.98e-10 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system | 9.50e-12 | 11 |
| autonomic nervous system | 9.98e-10 | 9 |
| epithelial fold | 4.49e-07 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
