FFCP PHASE1:Mm9::chr17:89600024..89600037,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=14309|HGNC=|MCL_coexpression_id=1104|UniProt=P35378,B2RQM3|association_with_transcript=-9bp_to_ENSMUST00000035701,NM_013523,uc008dvx.1_5end|description=CAGE_peak_2_at_Fshr_5end|id=chr17:89600024..89600037,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!4.43e-37!14;UBERON:0004176!8.20e-37!17;UBERON:0009196!8.20e-37!17;UBERON:0009117!8.20e-37!17;UBERON:0000991!1.08e-34!18;UBERON:0005564!1.08e-34!18;UBERON:0003135!1.58e-34!15;UBERON:0003101!2.69e-32!16;UBERON:0000079!2.69e-32!16;UBERON:0003133!1.14e-25!24;UBERON:0005156!1.39e-23!26;UBERON:0000990!1.39e-23!26;UBERON:0002323!3.94e-16!37;UBERON:0004458!3.94e-16!37;UBERON:0003886!1.15e-15!38;UBERON:0002553!3.16e-15!39;UBERON:0000464!6.34e-10!57|ontology_enrichment_uberon_v019_2=UBERON:0004176,6.54e-51,17;UBERON:0009196,6.54e-51,17;UBERON:0009117,6.54e-51,17;UBERON:0000473,4.60e-50,14;UBERON:0000991,4.49e-48,18;UBERON:0005564,4.49e-48,18;UBERON:0003135,1.02e-46,15;UBERON:0003101,8.68e-44,16;UBERON:0000079,8.68e-44,16;UBERON:0003133,5.24e-36,24;UBERON:0005156,3.22e-33,26;UBERON:0000990,3.22e-33,26;UBERON:0002323,2.95e-23,37;UBERON:0004458,2.95e-23,37;UBERON:0003886,1.23e-22,38;UBERON:0002553,4.79e-22,39;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,7.38088443082997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0.496375471371293,3.30567020184881,4.77891346867605,9.63049915297436,10.7968659554094,11.0673727117358,8.38874755405687,5.07326653734613,2.59227005632079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Fshr}} | ||
|EntrezGene=14309 | |||
|HGNC= | |||
|MCL_coexpression_id=1104 | |||
|UniProt=P35378,B2RQM3 | |||
|association_with_transcript=-9bp_to_ENSMUST00000035701,NM_013523,uc008dvx.1_5end | |||
|description=CAGE_peak_2_at_Fshr_5end | |||
|id=chr17:89600024..89600037,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!4.43e-37!14;UBERON:0004176!8.20e-37!17;UBERON:0009196!8.20e-37!17;UBERON:0009117!8.20e-37!17;UBERON:0000991!1.08e-34!18;UBERON:0005564!1.08e-34!18;UBERON:0003135!1.58e-34!15;UBERON:0003101!2.69e-32!16;UBERON:0000079!2.69e-32!16;UBERON:0003133!1.14e-25!24;UBERON:0005156!1.39e-23!26;UBERON:0000990!1.39e-23!26;UBERON:0002323!3.94e-16!37;UBERON:0004458!3.94e-16!37;UBERON:0003886!1.15e-15!38;UBERON:0002553!3.16e-15!39;UBERON:0000464!6.34e-10!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,6.54e-51,17;UBERON:0009196,6.54e-51,17;UBERON:0009117,6.54e-51,17;UBERON:0000473,4.60e-50,14;UBERON:0000991,4.49e-48,18;UBERON:0005564,4.49e-48,18;UBERON:0003135,1.02e-46,15;UBERON:0003101,8.68e-44,16;UBERON:0000079,8.68e-44,16;UBERON:0003133,5.24e-36,24;UBERON:0005156,3.22e-33,26;UBERON:0000990,3.22e-33,26;UBERON:0002323,2.95e-23,37;UBERON:0004458,2.95e-23,37;UBERON:0003886,1.23e-22,38;UBERON:0002553,4.79e-22,39;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,7.38088443082997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0.496375471371293,3.30567020184881,4.77891346867605,9.63049915297436,10.7968659554094,11.0673727117358,8.38874755405687,5.07326653734613,2.59227005632079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Fshr | |||
}} |
Revision as of 15:37, 13 September 2013
Short description: | p2@Fshr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fshr_5end |
Coexpression cluster: | MCL_coexpression_mm9:1104 |
Association with transcript: | -9bp_to_ENSMUST00000035701, NM_013523, uc008dvx.1_5end |
EntrezGene: | Fshr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 6.54e-51 | 17 |
indifferent external genitalia | 6.54e-51 | 17 |
indifferent gonad | 6.54e-51 | 17 |
testis | 4.60e-50 | 14 |
gonad | 4.49e-48 | 18 |
gonad primordium | 4.49e-48 | 18 |
male reproductive organ | 1.02e-46 | 15 |
male organism | 8.68e-44 | 16 |
male reproductive system | 8.68e-44 | 16 |
reproductive organ | 5.24e-36 | 24 |
reproductive structure | 3.22e-33 | 26 |
reproductive system | 3.22e-33 | 26 |
body cavity | 2.95e-23 | 37 |
body cavity or lining | 2.95e-23 | 37 |
body cavity precursor | 1.23e-22 | 38 |
anatomical cavity | 4.79e-22 | 39 |
mesoderm | 8.41e-07 | 120 |
mesoderm-derived structure | 8.41e-07 | 120 |
presumptive mesoderm | 8.41e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.