FFCP PHASE1:Mm9::chr13:44936126..44936164,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16468|HGNC=|MCL_coexpression_id=1346|UniProt=G3UZ12,Q62315|association_with_transcript=0bp_to_ENSMUST00000173003,uc007qgv.1_5end|description=CAGE_peak_6_at_Jarid2_5end|id=chr13:44936126..44936164,+|ontology_enrichment_celltype=CL:0000540!2.20e-21!33;CL:0000047!2.20e-21!33;CL:0000031!2.20e-21!33;CL:0000404!2.20e-21!33;CL:0000393!1.39e-16!39;CL:0000211!1.39e-16!39;CL:0000117!3.32e-15!23;CL:0000337!3.32e-15!23;CL:0002319!1.55e-12!43;CL:0000221!1.57e-12!44;CL:0000133!1.57e-12!44;CL:0000055!1.99e-09!50;CL:0000107!2.50e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,8.29e-26,33;CL:0000047,8.29e-26,33;CL:0000031,8.29e-26,33;CL:0000404,8.29e-26,33;CL:0000393,1.16e-19,39;CL:0000211,1.16e-19,39;CL:0000117,4.76e-19,23;CL:0000337,4.76e-19,23;CL:0002319,1.42e-16,43;CL:0000221,6.78e-16,44;CL:0000133,6.78e-16,44;CL:0000107,5.88e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.03e-29!73;UBERON:0005743!4.03e-29!73;UBERON:0002346!4.20e-28!71;UBERON:0003075!4.20e-28!71;UBERON:0007284!4.20e-28!71;UBERON:0000073!5.56e-28!75;UBERON:0001016!5.56e-28!75;UBERON:0004121!7.89e-27!102;UBERON:0000924!7.89e-27!102;UBERON:0006601!7.89e-27!102;UBERON:0001049!5.70e-21!52;UBERON:0005068!5.70e-21!52;UBERON:0006241!5.70e-21!52;UBERON:0007135!5.70e-21!52;UBERON:0000033!6.55e-21!63;UBERON:0000955!1.30e-19!50;UBERON:0006238!1.30e-19!50;UBERON:0003056!2.87e-19!49;UBERON:0002616!5.76e-19!49;UBERON:0003080!1.38e-16!40;UBERON:0002020!6.01e-16!34;UBERON:0002780!6.82e-16!39;UBERON:0001890!6.82e-16!39;UBERON:0006240!6.82e-16!39;UBERON:0002791!7.82e-13!29;UBERON:0003528!7.82e-13!29;UBERON:0001893!7.82e-13!29;UBERON:0007811!1.97e-09!86;UBERON:0000956!3.47e-08!21;UBERON:0001869!3.47e-08!21;UBERON:0000203!3.47e-08!21;UBERON:0000153!2.06e-07!94;UBERON:0002410!2.50e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.49e-37,73;UBERON:0001016,1.18e-35,75;UBERON:0002346,2.53e-31,64;UBERON:0003075,2.53e-31,64;UBERON:0007284,2.53e-31,64;UBERON:0004121,9.87e-31,95;UBERON:0000924,9.87e-31,95;UBERON:0006601,9.87e-31,95;UBERON:0000073,2.60e-28,54;UBERON:0001049,1.18e-26,52;UBERON:0005068,1.18e-26,52;UBERON:0006241,1.18e-26,52;UBERON:0007135,1.18e-26,52;UBERON:0010371,9.29e-25,73;UBERON:0000955,1.40e-22,47;UBERON:0006238,1.40e-22,47;UBERON:0003056,2.47e-22,49;UBERON:0002616,9.10e-22,46;UBERON:0002020,1.33e-20,34;UBERON:0010314,1.55e-20,92;UBERON:0003080,1.85e-20,40;UBERON:0002780,1.43e-19,39;UBERON:0001890,1.43e-19,39;UBERON:0006240,1.43e-19,39;UBERON:0003528,1.40e-16,29;UBERON:0002791,1.40e-16,29;UBERON:0001893,1.40e-16,29;UBERON:0000956,1.43e-10,21;UBERON:0001869,1.43e-10,21;UBERON:0000203,1.43e-10,21;UBERON:0002410,5.88e-09,9;UBERON:0002619,1.69e-08,17;UBERON:0002420,1.70e-07,8;UBERON:0007245,1.70e-07,8;UBERON:0010009,1.70e-07,8;UBERON:0010011,1.70e-07,8;UBERON:0000454,1.70e-07,8;UBERON:0002021,7.08e-07,10;UBERON:0000411,7.08e-07,10;UBERON:0001950,7.08e-07,10;UBERON:0000010,9.79e-07,11|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,22.2548106945558,21.6886301501533,15.8457850876545,0,0,0,0,0,0,0,3.21437798156281,5.67024940993101,1.89292465216244,5.14171771926846,6.84692476950002,10.1667363348412,11.5973019932066,10.1114066527102,11.0115880999389,5.36286819957788,6.60508093001847,26.2453712583086,18.8464545820964,20.8365348222704,3.07101298901519,9.56696437053856,5.65353516774197,9.42811473515737,10.9626194215309,20.3175395949578,0,0.151143120213571,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0.258937883647172,1.03909497345377,3.64319186208885,2.74018930480927,2.7673859670727,2.56228488939458,2.3517741427141,0.251333182659351,0,0,0,0,0,0,0,9.36898550436951,6.28340120440365,0,0,0,0,11.0845073159569,5.03250663100489,7.53926112677186,6.43149984711423,6.90431734791892,7.06479351502504,5.51620294430376,0.305518091550949,0.124406970610093,0.252722758433675,0.420883711772948,0.520481771850815,1.60931473103431,3.24111833649629,2.41127708537144,3.19771546011241,3.20284300712124,2.90475346135159,3.88055056108524,0,0,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0.116765342367169,0.329119699826961,0,0.162137619091711,0.146199987425332,0,0,3.15434922846191,3.2929475961371,0,0,1.49301775374664,3.71578674976702,1.67527699718721,1.4117846723634,2.2237804384487,1.52180500890047,0,0.494096864172033,0.251335208800269,0.596869416123452,0,0,0,0,0.758671603812327,1.25673363870702,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0.156998727841375,0,0,0,0.393117990226406,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0,1.13694847062291,0.162964976442026,0.509235257325564,0,0,0,0.195133647857799,0,0,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| ||
|EntrezGene=16468 | |||
|HGNC= | |||
|MCL_coexpression_id=1346 | |||
|UniProt=G3UZ12,Q62315 | |||
|association_with_transcript=0bp_to_ENSMUST00000173003,uc007qgv.1_5end | |||
|description=CAGE_peak_6_at_Jarid2_5end | |||
|id=chr13:44936126..44936164,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.20e-21!33;CL:0000047!2.20e-21!33;CL:0000031!2.20e-21!33;CL:0000404!2.20e-21!33;CL:0000393!1.39e-16!39;CL:0000211!1.39e-16!39;CL:0000117!3.32e-15!23;CL:0000337!3.32e-15!23;CL:0002319!1.55e-12!43;CL:0000221!1.57e-12!44;CL:0000133!1.57e-12!44;CL:0000055!1.99e-09!50;CL:0000107!2.50e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.29e-26,33;CL:0000047,8.29e-26,33;CL:0000031,8.29e-26,33;CL:0000404,8.29e-26,33;CL:0000393,1.16e-19,39;CL:0000211,1.16e-19,39;CL:0000117,4.76e-19,23;CL:0000337,4.76e-19,23;CL:0002319,1.42e-16,43;CL:0000221,6.78e-16,44;CL:0000133,6.78e-16,44;CL:0000107,5.88e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.03e-29!73;UBERON:0005743!4.03e-29!73;UBERON:0002346!4.20e-28!71;UBERON:0003075!4.20e-28!71;UBERON:0007284!4.20e-28!71;UBERON:0000073!5.56e-28!75;UBERON:0001016!5.56e-28!75;UBERON:0004121!7.89e-27!102;UBERON:0000924!7.89e-27!102;UBERON:0006601!7.89e-27!102;UBERON:0001049!5.70e-21!52;UBERON:0005068!5.70e-21!52;UBERON:0006241!5.70e-21!52;UBERON:0007135!5.70e-21!52;UBERON:0000033!6.55e-21!63;UBERON:0000955!1.30e-19!50;UBERON:0006238!1.30e-19!50;UBERON:0003056!2.87e-19!49;UBERON:0002616!5.76e-19!49;UBERON:0003080!1.38e-16!40;UBERON:0002020!6.01e-16!34;UBERON:0002780!6.82e-16!39;UBERON:0001890!6.82e-16!39;UBERON:0006240!6.82e-16!39;UBERON:0002791!7.82e-13!29;UBERON:0003528!7.82e-13!29;UBERON:0001893!7.82e-13!29;UBERON:0007811!1.97e-09!86;UBERON:0000956!3.47e-08!21;UBERON:0001869!3.47e-08!21;UBERON:0000203!3.47e-08!21;UBERON:0000153!2.06e-07!94;UBERON:0002410!2.50e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.49e-37,73;UBERON:0001016,1.18e-35,75;UBERON:0002346,2.53e-31,64;UBERON:0003075,2.53e-31,64;UBERON:0007284,2.53e-31,64;UBERON:0004121,9.87e-31,95;UBERON:0000924,9.87e-31,95;UBERON:0006601,9.87e-31,95;UBERON:0000073,2.60e-28,54;UBERON:0001049,1.18e-26,52;UBERON:0005068,1.18e-26,52;UBERON:0006241,1.18e-26,52;UBERON:0007135,1.18e-26,52;UBERON:0010371,9.29e-25,73;UBERON:0000955,1.40e-22,47;UBERON:0006238,1.40e-22,47;UBERON:0003056,2.47e-22,49;UBERON:0002616,9.10e-22,46;UBERON:0002020,1.33e-20,34;UBERON:0010314,1.55e-20,92;UBERON:0003080,1.85e-20,40;UBERON:0002780,1.43e-19,39;UBERON:0001890,1.43e-19,39;UBERON:0006240,1.43e-19,39;UBERON:0003528,1.40e-16,29;UBERON:0002791,1.40e-16,29;UBERON:0001893,1.40e-16,29;UBERON:0000956,1.43e-10,21;UBERON:0001869,1.43e-10,21;UBERON:0000203,1.43e-10,21;UBERON:0002410,5.88e-09,9;UBERON:0002619,1.69e-08,17;UBERON:0002420,1.70e-07,8;UBERON:0007245,1.70e-07,8;UBERON:0010009,1.70e-07,8;UBERON:0010011,1.70e-07,8;UBERON:0000454,1.70e-07,8;UBERON:0002021,7.08e-07,10;UBERON:0000411,7.08e-07,10;UBERON:0001950,7.08e-07,10;UBERON:0000010,9.79e-07,11 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,22.2548106945558,21.6886301501533,15.8457850876545,0,0,0,0,0,0,0,3.21437798156281,5.67024940993101,1.89292465216244,5.14171771926846,6.84692476950002,10.1667363348412,11.5973019932066,10.1114066527102,11.0115880999389,5.36286819957788,6.60508093001847,26.2453712583086,18.8464545820964,20.8365348222704,3.07101298901519,9.56696437053856,5.65353516774197,9.42811473515737,10.9626194215309,20.3175395949578,0,0.151143120213571,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0.258937883647172,1.03909497345377,3.64319186208885,2.74018930480927,2.7673859670727,2.56228488939458,2.3517741427141,0.251333182659351,0,0,0,0,0,0,0,9.36898550436951,6.28340120440365,0,0,0,0,11.0845073159569,5.03250663100489,7.53926112677186,6.43149984711423,6.90431734791892,7.06479351502504,5.51620294430376,0.305518091550949,0.124406970610093,0.252722758433675,0.420883711772948,0.520481771850815,1.60931473103431,3.24111833649629,2.41127708537144,3.19771546011241,3.20284300712124,2.90475346135159,3.88055056108524,0,0,0.175951124163949,0,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0.116765342367169,0.329119699826961,0,0.162137619091711,0.146199987425332,0,0,3.15434922846191,3.2929475961371,0,0,1.49301775374664,3.71578674976702,1.67527699718721,1.4117846723634,2.2237804384487,1.52180500890047,0,0.494096864172033,0.251335208800269,0.596869416123452,0,0,0,0,0.758671603812327,1.25673363870702,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0.156998727841375,0,0,0,0.393117990226406,0,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0,1.13694847062291,0.162964976442026,0.509235257325564,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,7.54587772942622,5.50894926983355,0,0,5.67914794949262,7.41833614163613,12.7099804662351,6.93009514062401,10.9171350300373,12.7384438854975,16.5972387686707,16.0740721851222,13.0444966722353,8.67567554338879,0,0,0.162886959353576,0,0,0.485561272309963,0,0.377210159511796,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,4.42571487479924,2.34079422240703,2.19909762430683,1.71469628025274,0.886701168211368,1.42695054081656,2.30368628842969,1.8267896946876,0,0,0,0,0,0.0603129249281559,0,0,0,5.7481843623258,0.170870880797853,0.619160603889667,0.370389054739423,0,0.136694227721025,0,0,0,0,0,3.32152793260192,2.64315307264903,0.648032044930808,1.04544148007234,0.87345025498471,0.674321731924103,0.661227645802687,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.58678619322877,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.386379188064381,0,0,0,0,1.12950368523413,2.30162618253588,2.86447756719698,3.09335728218638,6.16574267793578,9.06472676867641,10.8003600037089,4.95353323546643,7.70342095273148,5.69536342927002,7.05753963572401,9.57659696162474,5.63420898988643,3.40349403895612,3.14419743941973,1.65459157605013,2.00022055021454,1.23621034343337,2.24643446714271,1.76888048234658,2.5347929989024,2.07488975524684,1.77918864192777,1.60062881012173,1.83793500657962,1.42888107384922,1.39061191133827,2.31491064556446,0.824171801606613,1.61918812147837,2.74295401908332,1.4198064492747,0.476872379894642,1.74415699958794,1.50575008664529,2.03075058940024,1.64635175585495,2.36762740294059,1.49384525230448,1.12228454331548,1.77952527186261,1.97008964751127,1.22769312950907,2.01417893541756,1.92906610981141,2.49810577937946,0.935726433781634,1.28922632428979,1.14772999241306,0.661774257358546,0 | |||
|short_description=p6@Jarid2 | |||
}} |
Revision as of 00:36, 13 September 2013
Short description: | p6@Jarid2 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Jarid2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1346 |
Association with transcript: | 0bp_to_ENSMUST00000173003, uc007qgv.1_5end |
EntrezGene: | Jarid2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuron | 8.29e-26 | 33 |
neuronal stem cell | 8.29e-26 | 33 |
neuroblast | 8.29e-26 | 33 |
electrically signaling cell | 8.29e-26 | 33 |
electrically responsive cell | 1.16e-19 | 39 |
electrically active cell | 1.16e-19 | 39 |
CNS neuron (sensu Vertebrata) | 4.76e-19 | 23 |
neuroblast (sensu Vertebrata) | 4.76e-19 | 23 |
neural cell | 1.42e-16 | 43 |
ectodermal cell | 6.78e-16 | 44 |
neurectodermal cell | 6.78e-16 | 44 |
autonomic neuron | 5.88e-09 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.