FFCP PHASE1:Mm9::chr10:127520024..127520037,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:127520024..127520037,-|id=chr10:127520024..127520037,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.46e-08,6;CL:0000677,2.46e-08,6;CL:0000584,2.46e-08,6;CL:0000075,3.78e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.97e-10,18;UBERON:0000948,5.97e-10,18;UBERON:0005498,5.97e-10,18;UBERON:0004140,5.97e-10,18;UBERON:0009881,5.97e-10,18;UBERON:0004141,5.97e-10,18;UBERON:0003084,5.97e-10,18;UBERON:0007005,5.97e-10,18;UBERON:0004139,5.97e-10,18;UBERON:0004291,5.97e-10,18;UBERON:0004535,1.73e-09,23;UBERON:0001009,1.73e-09,23;UBERON:0003103,2.29e-09,43|phase1_expression=0,0.348975407639361,1.81999695755814,2.11724947914781,1.00179145989269,0.16787927191189,1.16806320297763,0.258246646883153,0.140788722151667,0.468129052643987,0.171217968225505,0,0,0.437102012094987,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0.319984845586813,0.45881856213434,0.57423196411502,0,0,0.190023419456374,0.504060259519861,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0.614426133024974,0,0.274462930807229,0,0.279182999001381,1.68828783009504,0.15279824777681,0.589257170947335,0,0.745597783301202,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0,0.376999773989026,0,1.44599356919912,0,0.647067399789637,0.662524555381181,0.484875253135222,0,1.75668478206928,1.25668024088073,1.02182822083437,0,0,0.381210681219194,0.898743836428936,0.457500602818626,0,0.695297280769106,0.255715457330331,0.20778804455956,0.324482526135515,0,0.497627882440372,0.505445516867349,0.210441855886474,0,0.229902104433473,0.360124259610698,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,2.06962696591213,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.414251545071004,0.469052119962192,0.900310307305074,0,0.787056926989615,1.54267112887378,1.62773761325285,2.41446061259657,1.5179494507732,1.15191894939436,0.985004784474571,1.37816976227955,1.75439984910399,0.878200461164203,1.74468344388483,0.210289948564127,0.102904612379284,1.98251269790279,1.32225283331772,0,0,0.38660238396628,0,0.444756087689741,0.570676878337677,0,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,0,1.08069024937347,0.995706366271836,0,0.114248512609729,1.1270773567308,0,0.969762435838129,0.771494018793504,0.379419222745544,1.62371162777562,1.56998727841375,1.1105744752962,0.296452627087149,0,0.393117990226406,0.224862112384854,0,0,0.763877555344259,0.287696137450811,0.972811360650212,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0.468846746368813,0,0.757412781613119,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0.329098041204242,0,0,0.42366414172764,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0,2.04036585640896,0.370850604021019,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.539457385539283,0.330613822901344,0.26175594198403,1.42576470620972,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0,0.316011120628178,0.405450430580328,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0,0.228620419965,0.100826185136841,0,0.0962118416403295,0,1.13365191807606,0,0,0,0.579568782096571,0,0,0.643105137237198,0,0.564751842617067,0,0,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0.341467211508268,0,0,0.367687016900028,0,0.206035057238894,0.64183841918363,0,0,0.377252682772152,0.280924522409647,0.192075457214608,0.287177344778066,0,0.811190281613988,0.192909220463705,0,0.294397840268795,1.37147700954166,0.354951612318675,0.953744759789284,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0,0.749431733813838,0.467863216890817,0.859484216193193,0.765153328275374,1.10295709559758,0.231867835620421|short_description=p@chr10:127520024..127520037,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:127520024..127520037,- | |||
|id=chr10:127520024..127520037,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.46e-08,6;CL:0000677,2.46e-08,6;CL:0000584,2.46e-08,6;CL:0000075,3.78e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.97e-10,18;UBERON:0000948,5.97e-10,18;UBERON:0005498,5.97e-10,18;UBERON:0004140,5.97e-10,18;UBERON:0009881,5.97e-10,18;UBERON:0004141,5.97e-10,18;UBERON:0003084,5.97e-10,18;UBERON:0007005,5.97e-10,18;UBERON:0004139,5.97e-10,18;UBERON:0004291,5.97e-10,18;UBERON:0004535,1.73e-09,23;UBERON:0001009,1.73e-09,23;UBERON:0003103,2.29e-09,43 | |||
|phase1_expression=0,0.348975407639361,1.81999695755814,2.11724947914781,1.00179145989269,0.16787927191189,1.16806320297763,0.258246646883153,0.140788722151667,0.468129052643987,0.171217968225505,0,0,0.437102012094987,0,0,0,0,0,0,0.595303031057488,0.0992909512008853,0,0.319984845586813,0.45881856213434,0.57423196411502,0,0,0.190023419456374,0.504060259519861,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0.614426133024974,0,0.274462930807229,0,0.279182999001381,1.68828783009504,0.15279824777681,0.589257170947335,0,0.745597783301202,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0,0.376999773989026,0,1.44599356919912,0,0.647067399789637,0.662524555381181,0.484875253135222,0,1.75668478206928,1.25668024088073,1.02182822083437,0,0,0.381210681219194,0.898743836428936,0.457500602818626,0,0.695297280769106,0.255715457330331,0.20778804455956,0.324482526135515,0,0.497627882440372,0.505445516867349,0.210441855886474,0,0.229902104433473,0.360124259610698,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,2.06962696591213,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0.414251545071004,0.469052119962192,0.900310307305074,0,0.787056926989615,1.54267112887378,1.62773761325285,2.41446061259657,1.5179494507732,1.15191894939436,0.985004784474571,1.37816976227955,1.75439984910399,0.878200461164203,1.74468344388483,0.210289948564127,0.102904612379284,1.98251269790279,1.32225283331772,0,0,0.38660238396628,0,0.444756087689741,0.570676878337677,0,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,0,1.08069024937347,0.995706366271836,0,0.114248512609729,1.1270773567308,0,0.969762435838129,0.771494018793504,0.379419222745544,1.62371162777562,1.56998727841375,1.1105744752962,0.296452627087149,0,0.393117990226406,0.224862112384854,0,0,0.763877555344259,0.287696137450811,0.972811360650212,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0.468846746368813,0,0.757412781613119,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0.388076051348264,0.214337035031592,0.354680467284547,0.356737635204141,0.329098041204242,0,0,0.42366414172764,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0,2.04036585640896,0.370850604021019,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.539457385539283,0.330613822901344,0.26175594198403,1.42576470620972,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0,0.316011120628178,0.405450430580328,0.205421914329655,0,0.179026695667481,0.198681354781265,0,0,0,0.228620419965,0.100826185136841,0,0.0962118416403295,0,1.13365191807606,0,0,0,0.579568782096571,0,0,0.643105137237198,0,0.564751842617067,0,0,0.515559547031063,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0.341467211508268,0,0,0.367687016900028,0,0.206035057238894,0.64183841918363,0,0,0.377252682772152,0.280924522409647,0.192075457214608,0.287177344778066,0,0.811190281613988,0.192909220463705,0,0.294397840268795,1.37147700954166,0.354951612318675,0.953744759789284,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.309873682371932,0,0.749431733813838,0.467863216890817,0.859484216193193,0.765153328275374,1.10295709559758,0.231867835620421 | |||
|short_description=p@chr10:127520024..127520037,- | |||
}} |
Revision as of 16:07, 12 September 2013
Short description: | p@chr10:127520024..127520037, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127520024..127520037, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.46e-08 | 6 |
gut absorptive cell | 2.46e-08 | 6 |
enterocyte | 2.46e-08 | 6 |
columnar/cuboidal epithelial cell | 3.78e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.97e-10 | 18 |
heart | 5.97e-10 | 18 |
primitive heart tube | 5.97e-10 | 18 |
primary heart field | 5.97e-10 | 18 |
anterior lateral plate mesoderm | 5.97e-10 | 18 |
heart tube | 5.97e-10 | 18 |
heart primordium | 5.97e-10 | 18 |
cardiac mesoderm | 5.97e-10 | 18 |
cardiogenic plate | 5.97e-10 | 18 |
heart rudiment | 5.97e-10 | 18 |
cardiovascular system | 1.73e-09 | 23 |
circulatory system | 1.73e-09 | 23 |
compound organ | 2.29e-09 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.