FFCP PHASE1:Mm9::chr1:135936966..135936975,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:135936966..135936975,-|id=chr1:135936966..135936975,-|ontology_enrichment_celltype=CL:0002453!2.63e-07!8|ontology_enrichment_celltype_v019_2=CL:0002605,1.73e-30,2;CL:0002604,1.73e-30,2;CL:0002453,1.22e-29,8;CL:0000333,7.26e-24,10;CL:0000095,7.26e-24,10;CL:0000243,7.26e-24,10;CL:0000123,7.26e-24,10;CL:0000125,7.26e-24,10;CL:0000030,7.26e-24,10;CL:0000339,7.26e-24,10;CL:0000128,1.14e-22,6;CL:0000126,1.14e-22,6;CL:0000127,1.14e-22,6;CL:0000878,1.53e-08,2;CL:0000129,1.53e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.78e-09,7;UBERON:0003022,1.78e-09,7;UBERON:0002421,1.78e-09,7;UBERON:0000349,1.78e-09,7;UBERON:0002600,1.78e-09,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.65407546914134,5.27246838562732,6.22175677037707,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,1.53687322128622,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970601099684455,0.883366073841574,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0,0,0.384341160854549,0.187403449119458,0,0,0,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0.146199987425332,0,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.325929952884052,1.01847051465113,0.704070744865506,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.535106452806212,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.367687016900028,0,0,0,0,0,0,0.280924522409647,0,0.229741875822453,0,0,0,0,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0.701794825336225,0,0.57386499620653,2.20591419119516,0.927471342481686|short_description=p@chr1:135936966..135936975,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:135936966..135936975,- | |||
|id=chr1:135936966..135936975,- | |||
|ontology_enrichment_celltype=CL:0002453!2.63e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.73e-30,2;CL:0002604,1.73e-30,2;CL:0002453,1.22e-29,8;CL:0000333,7.26e-24,10;CL:0000095,7.26e-24,10;CL:0000243,7.26e-24,10;CL:0000123,7.26e-24,10;CL:0000125,7.26e-24,10;CL:0000030,7.26e-24,10;CL:0000339,7.26e-24,10;CL:0000128,1.14e-22,6;CL:0000126,1.14e-22,6;CL:0000127,1.14e-22,6;CL:0000878,1.53e-08,2;CL:0000129,1.53e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.78e-09,7;UBERON:0003022,1.78e-09,7;UBERON:0002421,1.78e-09,7;UBERON:0000349,1.78e-09,7;UBERON:0002600,1.78e-09,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0.65407546914134,5.27246838562732,6.22175677037707,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898800331555214,1.53687322128622,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970601099684455,0.883366073841574,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0.101839363850316,0.373220911830279,0,0,0,0,0,0,0,0.384341160854549,0.187403449119458,0,0,0,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0.146199987425332,0,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.325929952884052,1.01847051465113,0.704070744865506,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.535106452806212,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.367687016900028,0,0,0,0,0,0,0.280924522409647,0,0.229741875822453,0,0,0,0,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0.385813221962283,0.249810577937946,0.701794825336225,0,0.57386499620653,2.20591419119516,0.927471342481686 | |||
|short_description=p@chr1:135936966..135936975,- | |||
}} |
Revision as of 18:55, 13 September 2013
Short description: | p@chr1:135936966..135936975, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135936966..135936975, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.73e-30 | 2 |
astrocyte of the hippocampus | 1.73e-30 | 2 |
oligodendrocyte precursor cell | 1.22e-29 | 8 |
migratory neural crest cell | 7.26e-24 | 10 |
neuron associated cell | 7.26e-24 | 10 |
glial cell (sensu Vertebrata) | 7.26e-24 | 10 |
neuron associated cell (sensu Vertebrata) | 7.26e-24 | 10 |
glial cell | 7.26e-24 | 10 |
glioblast | 7.26e-24 | 10 |
glioblast (sensu Vertebrata) | 7.26e-24 | 10 |
oligodendrocyte | 1.14e-22 | 6 |
macroglial cell | 1.14e-22 | 6 |
astrocyte | 1.14e-22 | 6 |
central nervous system macrophage | 1.53e-08 | 2 |
microglial cell | 1.53e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.78e-09 | 7 |
lobe parts of cerebral cortex | 1.78e-09 | 7 |
hippocampal formation | 1.78e-09 | 7 |
limbic system | 1.78e-09 | 7 |
limbic lobe | 1.78e-09 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.