FFCP PHASE1:Mm9::chr7:104991549..104991569,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18479|HGNC=|MCL_coexpression_id=1|UniProt=O88643,Q8K0Z3|association_with_transcript=100bp_to_NM_011035,uc009ijv.1,uc009ijw.1_5end|description=CAGE_peak_3_at_Pak1_5end|id=chr7:104991549..104991569,+|ontology_enrichment_celltype=CL:0000117!4.54e-13!23;CL:0000337!4.54e-13!23;CL:0000540!3.90e-11!33;CL:0000047!3.90e-11!33;CL:0000031!3.90e-11!33;CL:0000404!3.90e-11!33;CL:0000393!1.50e-08!39;CL:0000211!1.50e-08!39;CL:0000221!2.82e-07!44;CL:0000133!2.82e-07!44;CL:0002319!3.90e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,9.46e-18,23;CL:0000337,9.46e-18,23;CL:0000540,1.27e-12,33;CL:0000047,1.27e-12,33;CL:0000031,1.27e-12,33;CL:0000404,1.27e-12,33;CL:0000393,2.47e-09,39;CL:0000211,2.47e-09,39;CL:0002319,2.28e-08,43;CL:0000221,5.46e-08,44;CL:0000133,5.46e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.36e-25!63;UBERON:0001017!6.47e-24!73;UBERON:0005743!6.47e-24!73;UBERON:0001049!2.77e-23!52;UBERON:0005068!2.77e-23!52;UBERON:0006241!2.77e-23!52;UBERON:0007135!2.77e-23!52;UBERON:0000073!9.96e-23!75;UBERON:0001016!9.96e-23!75;UBERON:0000955!1.62e-22!50;UBERON:0006238!1.62e-22!50;UBERON:0002616!7.46e-22!49;UBERON:0004121!1.72e-21!102;UBERON:0000924!1.72e-21!102;UBERON:0006601!1.72e-21!102;UBERON:0002346!1.71e-20!71;UBERON:0003075!1.71e-20!71;UBERON:0007284!1.71e-20!71;UBERON:0003056!1.76e-19!49;UBERON:0002020!9.12e-19!34;UBERON:0003080!2.12e-18!40;UBERON:0002780!1.09e-17!39;UBERON:0001890!1.09e-17!39;UBERON:0006240!1.09e-17!39;UBERON:0002791!2.58e-16!29;UBERON:0003528!2.58e-16!29;UBERON:0001893!2.58e-16!29;UBERON:0007811!2.63e-14!86;UBERON:0000153!1.83e-13!94;UBERON:0000956!9.09e-12!21;UBERON:0001869!9.09e-12!21;UBERON:0000203!9.09e-12!21;UBERON:0002619!1.05e-09!17;UBERON:0002021!1.88e-08!10;UBERON:0000411!1.88e-08!10;UBERON:0001950!1.88e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.93e-28,54;UBERON:0001017,1.60e-26,73;UBERON:0001049,2.29e-26,52;UBERON:0005068,2.29e-26,52;UBERON:0006241,2.29e-26,52;UBERON:0007135,2.29e-26,52;UBERON:0002020,2.38e-25,34;UBERON:0001016,2.85e-25,75;UBERON:0002346,4.66e-25,64;UBERON:0003075,4.66e-25,64;UBERON:0007284,4.66e-25,64;UBERON:0000955,1.07e-22,47;UBERON:0006238,1.07e-22,47;UBERON:0004121,2.68e-22,95;UBERON:0000924,2.68e-22,95;UBERON:0006601,2.68e-22,95;UBERON:0003528,6.81e-22,29;UBERON:0002791,6.81e-22,29;UBERON:0001893,6.81e-22,29;UBERON:0002616,7.84e-22,46;UBERON:0010371,8.62e-21,73;UBERON:0003080,1.10e-19,40;UBERON:0003056,2.03e-19,49;UBERON:0002780,9.48e-19,39;UBERON:0001890,9.48e-19,39;UBERON:0006240,9.48e-19,39;UBERON:0000956,1.67e-15,21;UBERON:0001869,1.67e-15,21;UBERON:0000203,1.67e-15,21;UBERON:0010314,1.03e-13,92;UBERON:0002619,1.32e-12,17;UBERON:0002021,2.95e-11,10;UBERON:0000411,2.95e-11,10;UBERON:0001950,2.95e-11,10;UBERON:0002420,1.53e-07,8;UBERON:0007245,1.53e-07,8;UBERON:0010009,1.53e-07,8;UBERON:0010011,1.53e-07,8;UBERON:0000454,1.53e-07,8;UBERON:0003076,3.41e-07,12;UBERON:0003057,3.41e-07,12|phase1_expression=2.7225304007815,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0.439372365468944,0,0,1.43752564364972,0,0,0,0,0,0.515672092277442,4.24864567805155,5.28990979272033,4.43681982454325,0,0,0,0,0,0,0,4.14758449233911,4.05017814995072,3.78584930432488,3.14216082844184,3.3130281142742,6.61450315760752,5.07980996396653,6.43453150627015,15.4162233399144,17.4931653176707,15.5142598588806,5.27545150920775,4.11694396210843,4.16730696445408,18.7052609330925,9.56696437053856,10.0846843532695,4.71405736757868,5.26775218956681,4.28718725398191,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,1.82577746171277,2.21559419351475,1.03914401841148,1.06001872353102,0.845060518660083,0,0,0,0,0,0,0.79928715803342,0,0,0,0.608930956624282,0,0,0.587943535678524,0.502666365318702,0.247194967734374,0.144599356919912,0,4.36770494858005,1.76673214768315,2.90925151881133,0,28.1069565131085,29.5319856606972,0.255457055208591,0.599075622529601,0.599902730993408,0,29.9581278809645,21.0450277296568,10.3036568732549,38.4151747624931,34.5215867395946,16.4152555202052,18.8199865158599,0.509196819251581,0.248813941220186,0,0.631325567659422,0.260240885925407,0.459804208866946,1.26043490863744,1.20563854268572,1.02054748726992,2.43416068541215,1.59292931751539,1.29351685369508,0.431135985865684,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,24.1833440848746,9.46722433889417,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0,0,0,0.494096864172033,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.387904974335251,0.210407459670956,0.252946148497029,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.55425957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| ||
|EntrezGene=18479 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=O88643,Q8K0Z3 | |||
|association_with_transcript=100bp_to_NM_011035,uc009ijv.1,uc009ijw.1_5end | |||
|description=CAGE_peak_3_at_Pak1_5end | |||
|id=chr7:104991549..104991569,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.54e-13!23;CL:0000337!4.54e-13!23;CL:0000540!3.90e-11!33;CL:0000047!3.90e-11!33;CL:0000031!3.90e-11!33;CL:0000404!3.90e-11!33;CL:0000393!1.50e-08!39;CL:0000211!1.50e-08!39;CL:0000221!2.82e-07!44;CL:0000133!2.82e-07!44;CL:0002319!3.90e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.46e-18,23;CL:0000337,9.46e-18,23;CL:0000540,1.27e-12,33;CL:0000047,1.27e-12,33;CL:0000031,1.27e-12,33;CL:0000404,1.27e-12,33;CL:0000393,2.47e-09,39;CL:0000211,2.47e-09,39;CL:0002319,2.28e-08,43;CL:0000221,5.46e-08,44;CL:0000133,5.46e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.36e-25!63;UBERON:0001017!6.47e-24!73;UBERON:0005743!6.47e-24!73;UBERON:0001049!2.77e-23!52;UBERON:0005068!2.77e-23!52;UBERON:0006241!2.77e-23!52;UBERON:0007135!2.77e-23!52;UBERON:0000073!9.96e-23!75;UBERON:0001016!9.96e-23!75;UBERON:0000955!1.62e-22!50;UBERON:0006238!1.62e-22!50;UBERON:0002616!7.46e-22!49;UBERON:0004121!1.72e-21!102;UBERON:0000924!1.72e-21!102;UBERON:0006601!1.72e-21!102;UBERON:0002346!1.71e-20!71;UBERON:0003075!1.71e-20!71;UBERON:0007284!1.71e-20!71;UBERON:0003056!1.76e-19!49;UBERON:0002020!9.12e-19!34;UBERON:0003080!2.12e-18!40;UBERON:0002780!1.09e-17!39;UBERON:0001890!1.09e-17!39;UBERON:0006240!1.09e-17!39;UBERON:0002791!2.58e-16!29;UBERON:0003528!2.58e-16!29;UBERON:0001893!2.58e-16!29;UBERON:0007811!2.63e-14!86;UBERON:0000153!1.83e-13!94;UBERON:0000956!9.09e-12!21;UBERON:0001869!9.09e-12!21;UBERON:0000203!9.09e-12!21;UBERON:0002619!1.05e-09!17;UBERON:0002021!1.88e-08!10;UBERON:0000411!1.88e-08!10;UBERON:0001950!1.88e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.93e-28,54;UBERON:0001017,1.60e-26,73;UBERON:0001049,2.29e-26,52;UBERON:0005068,2.29e-26,52;UBERON:0006241,2.29e-26,52;UBERON:0007135,2.29e-26,52;UBERON:0002020,2.38e-25,34;UBERON:0001016,2.85e-25,75;UBERON:0002346,4.66e-25,64;UBERON:0003075,4.66e-25,64;UBERON:0007284,4.66e-25,64;UBERON:0000955,1.07e-22,47;UBERON:0006238,1.07e-22,47;UBERON:0004121,2.68e-22,95;UBERON:0000924,2.68e-22,95;UBERON:0006601,2.68e-22,95;UBERON:0003528,6.81e-22,29;UBERON:0002791,6.81e-22,29;UBERON:0001893,6.81e-22,29;UBERON:0002616,7.84e-22,46;UBERON:0010371,8.62e-21,73;UBERON:0003080,1.10e-19,40;UBERON:0003056,2.03e-19,49;UBERON:0002780,9.48e-19,39;UBERON:0001890,9.48e-19,39;UBERON:0006240,9.48e-19,39;UBERON:0000956,1.67e-15,21;UBERON:0001869,1.67e-15,21;UBERON:0000203,1.67e-15,21;UBERON:0010314,1.03e-13,92;UBERON:0002619,1.32e-12,17;UBERON:0002021,2.95e-11,10;UBERON:0000411,2.95e-11,10;UBERON:0001950,2.95e-11,10;UBERON:0002420,1.53e-07,8;UBERON:0007245,1.53e-07,8;UBERON:0010009,1.53e-07,8;UBERON:0010011,1.53e-07,8;UBERON:0000454,1.53e-07,8;UBERON:0003076,3.41e-07,12;UBERON:0003057,3.41e-07,12 | |||
|phase1_expression=2.7225304007815,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0.439372365468944,0,0,1.43752564364972,0,0,0,0,0,0.515672092277442,4.24864567805155,5.28990979272033,4.43681982454325,0,0,0,0,0,0,0,4.14758449233911,4.05017814995072,3.78584930432488,3.14216082844184,3.3130281142742,6.61450315760752,5.07980996396653,6.43453150627015,15.4162233399144,17.4931653176707,15.5142598588806,5.27545150920775,4.11694396210843,4.16730696445408,18.7052609330925,9.56696437053856,10.0846843532695,4.71405736757868,5.26775218956681,4.28718725398191,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,1.82577746171277,2.21559419351475,1.03914401841148,1.06001872353102,0.845060518660083,0,0,0,0,0,0,0.79928715803342,0,0,0,0.608930956624282,0,0,0.587943535678524,0.502666365318702,0.247194967734374,0.144599356919912,0,4.36770494858005,1.76673214768315,2.90925151881133,0,28.1069565131085,29.5319856606972,0.255457055208591,0.599075622529601,0.599902730993408,0,29.9581278809645,21.0450277296568,10.3036568732549,38.4151747624931,34.5215867395946,16.4152555202052,18.8199865158599,0.509196819251581,0.248813941220186,0,0.631325567659422,0.260240885925407,0.459804208866946,1.26043490863744,1.20563854268572,1.02054748726992,2.43416068541215,1.59292931751539,1.29351685369508,0.431135985865684,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0.469052119962192,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,24.1833440848746,9.46722433889417,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0,0,0,0.494096864172033,0,0,0,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.407302655690628,0.387904974335251,0.210407459670956,0.252946148497029,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,1.50791283939272,0,0,0,31.4679156376072,26.8414762296145,0,3.7870639080656,0,1.17131623288992,0.215423397732799,0.238968797952552,0.445597348164788,0,0.809621403349789,0.584511715822624,1.18586333383957,16.708708453934,0.283880170416537,0,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0,0,1.42598951353889,0,0,0,3.74483566329167,0.36012218806262,1.16422815404479,0.428674070063185,0.354680467284547,0.713475270408282,0.658196082408484,0.913394847343798,0,0,5.07215315526412,0.32977250588296,0.484393280087717,0.482503399425247,0.119372344003136,0.328281799490123,0,32.4494278518392,0,0.619160603889667,0,0,0.136694227721025,0,0.339956859987711,0.139951452323658,0.276399947608848,0.954670618015114,0.158167996790568,1.01659733563424,0.648032044930808,0.836353184057875,0.218362563746178,0.404593039154462,0.41326727862668,2.6175594198403,0,1.24267862617385,0,0.149516546043979,0,0,0.258319646955462,0,0,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0.608175645870493,0.102710957164827,0,0.358053391334963,0,0.120195449519969,0,0.403865799792591,0.15241361331,0,0.194915761479505,0.192423683280659,0.116876902181569,3.85441652145859,0,0,0,0.19318959403219,0.187682475451182,1.09890974560359,0.214368379079066,0,25.9785847603851,25.7782132444019,25.2074025913335,25.0905646221784,38.364621107156,40.7912704590438,33.7511250115903,34.674732648265,47.1268105343573,41.9385852518974,0.830298780673413,2.79317411380722,1.02440163452481,1.70174701947806,2.30574478890781,1.10306105070008,2.00022055021454,2.26638562962784,2.24643446714271,1.76888048234658,0.50695859978048,1.32038438970253,1.40462261204824,1.98477972455095,2.1825478203133,1.90517476513229,2.31768651889711,2.31491064556446,2.06042950401653,2.94397840268795,4.11443102862498,1.95223386775271,2.38436189947321,1.59881058295561,1.78807822789128,2.36920902096694,2.74391959309159,2.36762740294059,3.12349461845482,2.24456908663095,2.25406534435931,2.36410757701352,1.63692417267876,1.54936841185966,2.12197272079256,3.49734809113124,1.16965804222704,1.07435527024149,3.25190164517034,4.85301122062934,3.94175320554716 | |||
|short_description=p3@Pak1 | |||
}} |
Revision as of 11:10, 14 September 2013
Short description: | p3@Pak1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pak1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 100bp_to_NM_011035, uc009ijv.1, uc009ijw.1_5end |
EntrezGene: | Pak1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.46e-18 | 23 |
neuroblast (sensu Vertebrata) | 9.46e-18 | 23 |
neuron | 1.27e-12 | 33 |
neuronal stem cell | 1.27e-12 | 33 |
neuroblast | 1.27e-12 | 33 |
electrically signaling cell | 1.27e-12 | 33 |
electrically responsive cell | 2.47e-09 | 39 |
electrically active cell | 2.47e-09 | 39 |
neural cell | 2.28e-08 | 43 |
ectodermal cell | 5.46e-08 | 44 |
neurectodermal cell | 5.46e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.