FFCP PHASE1:Mm9::chr10:90210415..90210417,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:90210415..90210417,+|id=chr10:90210415..90210417,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.03e-20!63;UBERON:0000955!4.75e-20!50;UBERON:0006238!4.75e-20!50;UBERON:0002616!9.11e-19!49;UBERON:0002021!4.63e-17!10;UBERON:0000411!4.63e-17!10;UBERON:0001950!4.63e-17!10;UBERON:0001049!4.75e-17!52;UBERON:0005068!4.75e-17!52;UBERON:0006241!4.75e-17!52;UBERON:0007135!4.75e-17!52;UBERON:0002346!2.34e-15!71;UBERON:0003075!2.34e-15!71;UBERON:0007284!2.34e-15!71;UBERON:0003056!6.45e-15!49;UBERON:0001017!6.91e-14!73;UBERON:0005743!6.91e-14!73;UBERON:0007811!9.31e-14!86;UBERON:0000073!2.51e-13!75;UBERON:0001016!2.51e-13!75;UBERON:0003080!4.83e-13!40;UBERON:0000153!6.22e-12!94;UBERON:0002780!7.28e-12!39;UBERON:0001890!7.28e-12!39;UBERON:0006240!7.28e-12!39;UBERON:0002791!9.35e-12!29;UBERON:0003528!9.35e-12!29;UBERON:0001893!9.35e-12!29;UBERON:0004121!2.32e-11!102;UBERON:0000924!2.32e-11!102;UBERON:0006601!2.32e-11!102;UBERON:0002619!2.39e-11!17;UBERON:0002020!7.44e-11!34;UBERON:0000956!1.18e-10!21;UBERON:0001869!1.18e-10!21;UBERON:0000203!1.18e-10!21;UBERON:0002298!5.20e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.29e-69,10;UBERON:0000411,2.29e-69,10;UBERON:0001950,2.29e-69,10;UBERON:0002619,6.20e-41,17;UBERON:0000956,3.51e-33,21;UBERON:0001869,3.51e-33,21;UBERON:0000203,3.51e-33,21;UBERON:0003528,4.48e-24,29;UBERON:0002791,4.48e-24,29;UBERON:0001893,4.48e-24,29;UBERON:0002020,1.50e-20,34;UBERON:0002780,6.32e-18,39;UBERON:0001890,6.32e-18,39;UBERON:0006240,6.32e-18,39;UBERON:0003080,1.77e-17,40;UBERON:0002616,3.33e-15,46;UBERON:0000955,7.01e-15,47;UBERON:0006238,7.01e-15,47;UBERON:0003056,2.84e-14,49;UBERON:0001049,1.89e-13,52;UBERON:0005068,1.89e-13,52;UBERON:0006241,1.89e-13,52;UBERON:0007135,1.89e-13,52;UBERON:0000073,5.97e-13,54;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0.56276261003168,0.61119299110724,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.449371918214468,0.915001205637253,0,0.869121600961382,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,2.86447756719698,3.60891682921744,0,0.755393897389701,1.35004500046361,2.2516060161211,4.07828168085784,1.03552062350364,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0.354951612318675,0.238436189947321,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr10:90210415..90210417,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:90210415..90210417,+ | |||
|id=chr10:90210415..90210417,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.03e-20!63;UBERON:0000955!4.75e-20!50;UBERON:0006238!4.75e-20!50;UBERON:0002616!9.11e-19!49;UBERON:0002021!4.63e-17!10;UBERON:0000411!4.63e-17!10;UBERON:0001950!4.63e-17!10;UBERON:0001049!4.75e-17!52;UBERON:0005068!4.75e-17!52;UBERON:0006241!4.75e-17!52;UBERON:0007135!4.75e-17!52;UBERON:0002346!2.34e-15!71;UBERON:0003075!2.34e-15!71;UBERON:0007284!2.34e-15!71;UBERON:0003056!6.45e-15!49;UBERON:0001017!6.91e-14!73;UBERON:0005743!6.91e-14!73;UBERON:0007811!9.31e-14!86;UBERON:0000073!2.51e-13!75;UBERON:0001016!2.51e-13!75;UBERON:0003080!4.83e-13!40;UBERON:0000153!6.22e-12!94;UBERON:0002780!7.28e-12!39;UBERON:0001890!7.28e-12!39;UBERON:0006240!7.28e-12!39;UBERON:0002791!9.35e-12!29;UBERON:0003528!9.35e-12!29;UBERON:0001893!9.35e-12!29;UBERON:0004121!2.32e-11!102;UBERON:0000924!2.32e-11!102;UBERON:0006601!2.32e-11!102;UBERON:0002619!2.39e-11!17;UBERON:0002020!7.44e-11!34;UBERON:0000956!1.18e-10!21;UBERON:0001869!1.18e-10!21;UBERON:0000203!1.18e-10!21;UBERON:0002298!5.20e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.29e-69,10;UBERON:0000411,2.29e-69,10;UBERON:0001950,2.29e-69,10;UBERON:0002619,6.20e-41,17;UBERON:0000956,3.51e-33,21;UBERON:0001869,3.51e-33,21;UBERON:0000203,3.51e-33,21;UBERON:0003528,4.48e-24,29;UBERON:0002791,4.48e-24,29;UBERON:0001893,4.48e-24,29;UBERON:0002020,1.50e-20,34;UBERON:0002780,6.32e-18,39;UBERON:0001890,6.32e-18,39;UBERON:0006240,6.32e-18,39;UBERON:0003080,1.77e-17,40;UBERON:0002616,3.33e-15,46;UBERON:0000955,7.01e-15,47;UBERON:0006238,7.01e-15,47;UBERON:0003056,2.84e-14,49;UBERON:0001049,1.89e-13,52;UBERON:0005068,1.89e-13,52;UBERON:0006241,1.89e-13,52;UBERON:0007135,1.89e-13,52;UBERON:0000073,5.97e-13,54;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.46081959976873,0,0,0,0,0.56276261003168,0.61119299110724,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.449371918214468,0.915001205637253,0,0.869121600961382,0.255715457330331,0.20778804455956,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,2.86447756719698,3.60891682921744,0,0.755393897389701,1.35004500046361,2.2516060161211,4.07828168085784,1.03552062350364,0,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0,0,0.354951612318675,0.238436189947321,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr10:90210415..90210417,+ | |||
}} |
Revision as of 17:57, 12 September 2013
Short description: | p@chr10:90210415..90210417, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:90210415..90210417, + |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.29e-69 | 10 |
visual cortex | 2.29e-69 | 10 |
neocortex | 2.29e-69 | 10 |
regional part of cerebral cortex | 6.20e-41 | 17 |
cerebral cortex | 3.51e-33 | 21 |
cerebral hemisphere | 3.51e-33 | 21 |
pallium | 3.51e-33 | 21 |
brain grey matter | 4.48e-24 | 29 |
regional part of telencephalon | 4.48e-24 | 29 |
telencephalon | 4.48e-24 | 29 |
gray matter | 1.50e-20 | 34 |
regional part of forebrain | 6.32e-18 | 39 |
forebrain | 6.32e-18 | 39 |
future forebrain | 6.32e-18 | 39 |
anterior neural tube | 1.77e-17 | 40 |
regional part of brain | 3.33e-15 | 46 |
brain | 7.01e-15 | 47 |
future brain | 7.01e-15 | 47 |
pre-chordal neural plate | 2.84e-14 | 49 |
neural tube | 1.89e-13 | 52 |
neural rod | 1.89e-13 | 52 |
future spinal cord | 1.89e-13 | 52 |
neural keel | 1.89e-13 | 52 |
regional part of nervous system | 5.97e-13 | 54 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
ecto-epithelium | 1.46e-09 | 73 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.