FFCP PHASE1:Mm9::chr9:99336889..99336952,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17532|HGNC=|MCL_coexpression_id=620|UniProt=O08989,Q3TPX5|association_with_transcript=178bp_to_NM_008624,uc009rec.1_5end|description=CAGE_peak_2_at_Mras_5end|id=chr9:99336889..99336952,-|ontology_enrichment_celltype=CL:0000055!1.90e-10!50;CL:0002319!1.21e-09!43;CL:0000221!1.66e-09!44;CL:0000133!1.66e-09!44;CL:0000117!1.97e-08!23;CL:0000337!1.97e-08!23;CL:0000333!5.05e-07!10;CL:0000095!5.05e-07!10;CL:0000243!5.05e-07!10;CL:0000123!5.05e-07!10;CL:0000125!5.05e-07!10;CL:0000030!5.05e-07!10;CL:0000339!5.05e-07!10|ontology_enrichment_celltype_v019_2=CL:0002319,1.87e-09,43;CL:0000221,2.54e-09,44;CL:0000133,2.54e-09,44;CL:0000117,1.50e-08,23;CL:0000337,1.50e-08,23;CL:0000333,4.06e-07,10;CL:0000095,4.06e-07,10;CL:0000243,4.06e-07,10;CL:0000123,4.06e-07,10;CL:0000125,4.06e-07,10;CL:0000030,4.06e-07,10;CL:0000339,4.06e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.47e-22!75;UBERON:0001016!3.47e-22!75;UBERON:0004121!1.35e-21!102;UBERON:0000924!1.35e-21!102;UBERON:0006601!1.35e-21!102;UBERON:0001017!2.58e-21!73;UBERON:0005743!2.58e-21!73;UBERON:0001049!5.27e-20!52;UBERON:0005068!5.27e-20!52;UBERON:0006241!5.27e-20!52;UBERON:0007135!5.27e-20!52;UBERON:0002346!1.36e-19!71;UBERON:0003075!1.36e-19!71;UBERON:0007284!1.36e-19!71;UBERON:0000955!3.39e-19!50;UBERON:0006238!3.39e-19!50;UBERON:0002616!1.25e-18!49;UBERON:0000033!5.06e-17!63;UBERON:0002020!1.75e-15!34;UBERON:0003080!1.42e-13!40;UBERON:0002791!3.13e-13!29;UBERON:0003528!3.13e-13!29;UBERON:0001893!3.13e-13!29;UBERON:0002780!6.44e-13!39;UBERON:0001890!6.44e-13!39;UBERON:0006240!6.44e-13!39;UBERON:0003056!8.72e-13!49;UBERON:0004111!3.94e-11!122;UBERON:0000025!6.05e-11!114;UBERON:0000956!8.35e-10!21;UBERON:0001869!8.35e-10!21;UBERON:0000203!8.35e-10!21;UBERON:0002619!3.78e-09!17;UBERON:0000153!4.20e-08!94;UBERON:0007811!4.86e-08!86;UBERON:0000468!1.41e-07!333;UBERON:0003076!2.22e-07!12;UBERON:0003057!2.22e-07!12;UBERON:0002021!5.92e-07!10;UBERON:0000411!5.92e-07!10;UBERON:0001950!5.92e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.47e-22,75;UBERON:0000073,3.65e-21,54;UBERON:0001017,4.89e-21,73;UBERON:0001049,4.32e-20,52;UBERON:0005068,4.32e-20,52;UBERON:0006241,4.32e-20,52;UBERON:0007135,4.32e-20,52;UBERON:0004121,7.42e-20,95;UBERON:0000924,7.42e-20,95;UBERON:0006601,7.42e-20,95;UBERON:0002346,1.67e-18,64;UBERON:0003075,1.67e-18,64;UBERON:0007284,1.67e-18,64;UBERON:0000955,1.61e-17,47;UBERON:0006238,1.61e-17,47;UBERON:0002616,5.84e-17,46;UBERON:0002020,1.00e-15,34;UBERON:0010371,2.72e-15,73;UBERON:0010314,3.38e-15,92;UBERON:0003080,1.43e-13,40;UBERON:0003528,1.96e-13,29;UBERON:0002791,1.96e-13,29;UBERON:0001893,1.96e-13,29;UBERON:0002780,6.60e-13,39;UBERON:0001890,6.60e-13,39;UBERON:0006240,6.60e-13,39;UBERON:0003056,7.65e-13,49;UBERON:0004111,9.53e-11,122;UBERON:0000025,1.21e-10,114;UBERON:0000956,6.01e-10,21;UBERON:0001869,6.01e-10,21;UBERON:0000203,6.01e-10,21;UBERON:0002619,2.79e-09,17;UBERON:0003076,1.75e-07,12;UBERON:0003057,1.75e-07,12;UBERON:0002021,4.77e-07,10;UBERON:0000411,4.77e-07,10;UBERON:0001950,4.77e-07,10|phase1_expression=0.80074423552397,0,0.454999239389536,0,0,0.33575854382378,0,0,0,0,0,0,0,0.0874204024189974,0.999329285446988,0.607425802169478,1.39912375625629,0.315462165358238,0.274228867211478,0,5.86798702042381,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0.380046838912748,0.252030129759931,0.443461021310609,0,0,0,0.288851619751275,1.49611180822643,0.816677425049476,0,0,0,0,0,0.485510353031154,9.56815816614387,8.21153142878068,6.9747765821439,22.6893489860931,14.8257106338704,29.2182623036848,22.3594383935426,18.4782076545479,18.6878333674463,0,0,0,3.34437266846731,3.15186783932632,7.73508138416164,5.86717736492834,7.40587370980846,3.80298842103708,4.74382344896785,10.6715375533337,6.74924787961049,5.93319817540185,4.2628806896766,23.9680088414724,38.4218305321555,3.7328260431052,4.05017814995072,3.15487442027073,17.9960120174396,18.5529574399355,4.16468717330844,3.73797336971122,2.75765635983006,17.6185409599022,18.0039146700115,14.2854075928306,7.25374582516066,6.31264740856627,6.25096044668112,15.6342479440773,14.6318278608237,13.9046405476897,11.1958862479994,10.1083893367363,4.10078780815661,8.78423842664935,5.97015324843606,16.8121403446973,0,1.3599426674155,0.539703191637817,1.94932925234301,1.79210754838934,3.5111105032938,3.40860645156115,2.59786004602869,1.41335829804136,2.25349471642689,3.84979432242953,2.54805239706646,7.11066703153331,0.432982082022428,1.26679932737549,0.505524445014783,2.16949371466214,3.88406825470758,11.1331604298619,1.21439728736295,5.48037860961854,3.92046345335299,4.37095657602605,6.11461277105665,3.64433114856059,24.9666917411718,8.6759614151947,1.76922110389975,3.558870698843,3.97514733228708,6.78825354389311,3.72783522436244,16.1029438356351,11.51956887474,2.29911349687732,0.479260498023681,0,0.127070227073065,27.1121057322729,19.6725259212009,6.78533501409468,20.1636211423041,21.9915293304084,21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| ||
|EntrezGene=17532 | |||
|HGNC= | |||
|MCL_coexpression_id=620 | |||
|UniProt=O08989,Q3TPX5 | |||
|association_with_transcript=178bp_to_NM_008624,uc009rec.1_5end | |||
|description=CAGE_peak_2_at_Mras_5end | |||
|id=chr9:99336889..99336952,- | |||
|ontology_enrichment_celltype=CL:0000055!1.90e-10!50;CL:0002319!1.21e-09!43;CL:0000221!1.66e-09!44;CL:0000133!1.66e-09!44;CL:0000117!1.97e-08!23;CL:0000337!1.97e-08!23;CL:0000333!5.05e-07!10;CL:0000095!5.05e-07!10;CL:0000243!5.05e-07!10;CL:0000123!5.05e-07!10;CL:0000125!5.05e-07!10;CL:0000030!5.05e-07!10;CL:0000339!5.05e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.87e-09,43;CL:0000221,2.54e-09,44;CL:0000133,2.54e-09,44;CL:0000117,1.50e-08,23;CL:0000337,1.50e-08,23;CL:0000333,4.06e-07,10;CL:0000095,4.06e-07,10;CL:0000243,4.06e-07,10;CL:0000123,4.06e-07,10;CL:0000125,4.06e-07,10;CL:0000030,4.06e-07,10;CL:0000339,4.06e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.47e-22!75;UBERON:0001016!3.47e-22!75;UBERON:0004121!1.35e-21!102;UBERON:0000924!1.35e-21!102;UBERON:0006601!1.35e-21!102;UBERON:0001017!2.58e-21!73;UBERON:0005743!2.58e-21!73;UBERON:0001049!5.27e-20!52;UBERON:0005068!5.27e-20!52;UBERON:0006241!5.27e-20!52;UBERON:0007135!5.27e-20!52;UBERON:0002346!1.36e-19!71;UBERON:0003075!1.36e-19!71;UBERON:0007284!1.36e-19!71;UBERON:0000955!3.39e-19!50;UBERON:0006238!3.39e-19!50;UBERON:0002616!1.25e-18!49;UBERON:0000033!5.06e-17!63;UBERON:0002020!1.75e-15!34;UBERON:0003080!1.42e-13!40;UBERON:0002791!3.13e-13!29;UBERON:0003528!3.13e-13!29;UBERON:0001893!3.13e-13!29;UBERON:0002780!6.44e-13!39;UBERON:0001890!6.44e-13!39;UBERON:0006240!6.44e-13!39;UBERON:0003056!8.72e-13!49;UBERON:0004111!3.94e-11!122;UBERON:0000025!6.05e-11!114;UBERON:0000956!8.35e-10!21;UBERON:0001869!8.35e-10!21;UBERON:0000203!8.35e-10!21;UBERON:0002619!3.78e-09!17;UBERON:0000153!4.20e-08!94;UBERON:0007811!4.86e-08!86;UBERON:0000468!1.41e-07!333;UBERON:0003076!2.22e-07!12;UBERON:0003057!2.22e-07!12;UBERON:0002021!5.92e-07!10;UBERON:0000411!5.92e-07!10;UBERON:0001950!5.92e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.47e-22,75;UBERON:0000073,3.65e-21,54;UBERON:0001017,4.89e-21,73;UBERON:0001049,4.32e-20,52;UBERON:0005068,4.32e-20,52;UBERON:0006241,4.32e-20,52;UBERON:0007135,4.32e-20,52;UBERON:0004121,7.42e-20,95;UBERON:0000924,7.42e-20,95;UBERON:0006601,7.42e-20,95;UBERON:0002346,1.67e-18,64;UBERON:0003075,1.67e-18,64;UBERON:0007284,1.67e-18,64;UBERON:0000955,1.61e-17,47;UBERON:0006238,1.61e-17,47;UBERON:0002616,5.84e-17,46;UBERON:0002020,1.00e-15,34;UBERON:0010371,2.72e-15,73;UBERON:0010314,3.38e-15,92;UBERON:0003080,1.43e-13,40;UBERON:0003528,1.96e-13,29;UBERON:0002791,1.96e-13,29;UBERON:0001893,1.96e-13,29;UBERON:0002780,6.60e-13,39;UBERON:0001890,6.60e-13,39;UBERON:0006240,6.60e-13,39;UBERON:0003056,7.65e-13,49;UBERON:0004111,9.53e-11,122;UBERON:0000025,1.21e-10,114;UBERON:0000956,6.01e-10,21;UBERON:0001869,6.01e-10,21;UBERON:0000203,6.01e-10,21;UBERON:0002619,2.79e-09,17;UBERON:0003076,1.75e-07,12;UBERON:0003057,1.75e-07,12;UBERON:0002021,4.77e-07,10;UBERON:0000411,4.77e-07,10;UBERON:0001950,4.77e-07,10 | |||
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| |||
|short_description=p2@Mras | |||
}} |
Revision as of 19:05, 14 September 2013
Short description: | p2@Mras |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mras_5end |
Coexpression cluster: | MCL_coexpression_mm9:620 |
Association with transcript: | 178bp_to_NM_008624, uc009rec.1_5end |
EntrezGene: | Mras |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.87e-09 | 43 |
ectodermal cell | 2.54e-09 | 44 |
neurectodermal cell | 2.54e-09 | 44 |
CNS neuron (sensu Vertebrata) | 1.50e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.50e-08 | 23 |
migratory neural crest cell | 4.06e-07 | 10 |
neuron associated cell | 4.06e-07 | 10 |
glial cell (sensu Vertebrata) | 4.06e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.06e-07 | 10 |
glial cell | 4.06e-07 | 10 |
glioblast | 4.06e-07 | 10 |
glioblast (sensu Vertebrata) | 4.06e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.