FFCP PHASE1:Mm9::chr13:73830014..73830025,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74338|HGNC=|MCL_coexpression_id=46|UniProt=|association_with_transcript=58bp_to_ENSMUST00000120322_5end|description=CAGE_peak_4_at_Slc6a19_5end|id=chr13:73830014..73830025,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000625,5.07e-23,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.89e-30,3;UBERON:0000478,7.89e-30,3;UBERON:0000158,7.89e-30,3;UBERON:0000305,3.06e-23,1;UBERON:0001987,5.17e-12,2;UBERON:0003124,5.17e-12,2;UBERON:0004340,5.17e-12,2;UBERON:0004871,1.13e-08,3|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.630924330716475,0.822686601634433,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,6.38578218370682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0.304465478312141,0,0,0.117588707135705,0,16.5620628382031,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0,0.380451252225118,0,0.494096864172033,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.350679099451593,0.442655759869801,0.590440591918409,0.156998727841375,0.740382983530803,0,0.500535317148282,0,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668396022247182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.0591603543191,0,0.16488625294148,0,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0.512612642393558,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.39736270956253,0.841368146639782,0.443068581523732,0.302899349844443,0.228620419965,0.403304740547362,0.779663045918019,0.384847366561318,3.15567635890236,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p4@Slc6a19}} | ||
|EntrezGene=74338 | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|UniProt= | |||
|association_with_transcript=58bp_to_ENSMUST00000120322_5end | |||
|description=CAGE_peak_4_at_Slc6a19_5end | |||
|id=chr13:73830014..73830025,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,5.07e-23,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.89e-30,3;UBERON:0000478,7.89e-30,3;UBERON:0000158,7.89e-30,3;UBERON:0000305,3.06e-23,1;UBERON:0001987,5.17e-12,2;UBERON:0003124,5.17e-12,2;UBERON:0004340,5.17e-12,2;UBERON:0004871,1.13e-08,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.630924330716475,0.822686601634433,0,0.0850432901510698,0,0,0,0,0,0.430761996159075,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,6.38578218370682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0.304465478312141,0,0,0.117588707135705,0,16.5620628382031,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.136072998302656,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0.201683524623343,0,0.380451252225118,0,0.494096864172033,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.350679099451593,0.442655759869801,0.590440591918409,0.156998727841375,0.740382983530803,0,0.500535317148282,0,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.668396022247182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,1.0591603543191,0,0.16488625294148,0,0,0.119372344003136,0.164140899745061,0,0.18542530201051,0.512612642393558,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.39736270956253,0.841368146639782,0.443068581523732,0.302899349844443,0.228620419965,0.403304740547362,0.779663045918019,0.384847366561318,3.15567635890236,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p4@Slc6a19 | |||
}} |
Revision as of 01:05, 13 September 2013
Short description: | p4@Slc6a19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc6a19_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | 58bp_to_ENSMUST00000120322_5end |
EntrezGene: | Slc6a19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 5.07e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.89e-30 | 3 |
extraembryonic structure | 7.89e-30 | 3 |
membranous layer | 7.89e-30 | 3 |
amnion | 3.06e-23 | 1 |
placenta | 5.17e-12 | 2 |
chorion | 5.17e-12 | 2 |
allantois | 5.17e-12 | 2 |
somatic layer of lateral plate mesoderm | 1.13e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.