FFCP PHASE1:Mm9::chr10:13272946..13272959,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56535|HGNC=|MCL_coexpression_id=60|UniProt=E9QA46,Q3UIG2,Q9QXY9|association_with_transcript=0bp_to_ENSMUST00000170376,NM_001164195,NM_019961,uc007ekx.2,uc007eky.2_5end|description=CAGE_peak_4_at_Pex3_5end|id=chr10:13272946..13272959,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.55e-15!63;UBERON:0001049!1.50e-13!52;UBERON:0005068!1.50e-13!52;UBERON:0006241!1.50e-13!52;UBERON:0007135!1.50e-13!52;UBERON:0000955!5.63e-13!50;UBERON:0006238!5.63e-13!50;UBERON:0002346!1.25e-12!71;UBERON:0003075!1.25e-12!71;UBERON:0007284!1.25e-12!71;UBERON:0002616!2.11e-12!49;UBERON:0000073!3.36e-12!75;UBERON:0001016!3.36e-12!75;UBERON:0002020!9.51e-12!34;UBERON:0001017!1.06e-11!73;UBERON:0005743!1.06e-11!73;UBERON:0004121!1.26e-11!102;UBERON:0000924!1.26e-11!102;UBERON:0006601!1.26e-11!102;UBERON:0003056!5.37e-11!49;UBERON:0003080!7.15e-10!40;UBERON:0002791!1.06e-09!29;UBERON:0003528!1.06e-09!29;UBERON:0001893!1.06e-09!29;UBERON:0002780!2.25e-09!39;UBERON:0001890!2.25e-09!39;UBERON:0006240!2.25e-09!39;UBERON:0004111!2.25e-09!122;UBERON:0000025!1.13e-07!114;UBERON:0002619!2.73e-07!17;UBERON:0002021!4.53e-07!10;UBERON:0000411!4.53e-07!10;UBERON:0001950!4.53e-07!10;UBERON:0000956!7.41e-07!21;UBERON:0001869!7.41e-07!21;UBERON:0000203!7.41e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.65e-17,54;UBERON:0010314,1.00e-16,92;UBERON:0001049,4.50e-16,52;UBERON:0005068,4.50e-16,52;UBERON:0006241,4.50e-16,52;UBERON:0007135,4.50e-16,52;UBERON:0002346,2.30e-14,64;UBERON:0003075,2.30e-14,64;UBERON:0007284,2.30e-14,64;UBERON:0001016,2.36e-14,75;UBERON:0001017,3.15e-14,73;UBERON:0002020,4.45e-14,34;UBERON:0000955,1.50e-13,47;UBERON:0006238,1.50e-13,47;UBERON:0002616,9.90e-13,46;UBERON:0004121,2.88e-12,95;UBERON:0000924,2.88e-12,95;UBERON:0006601,2.88e-12,95;UBERON:0010371,9.14e-12,73;UBERON:0003528,1.65e-11,29;UBERON:0002791,1.65e-11,29;UBERON:0001893,1.65e-11,29;UBERON:0003080,5.27e-11,40;UBERON:0004111,8.33e-11,122;UBERON:0002021,1.17e-10,10;UBERON:0000411,1.17e-10,10;UBERON:0001950,1.17e-10,10;UBERON:0002780,2.79e-10,39;UBERON:0001890,2.79e-10,39;UBERON:0006240,2.79e-10,39;UBERON:0003056,6.51e-10,49;UBERON:0000025,5.24e-09,114;UBERON:0002619,8.42e-09,17;UBERON:0000956,1.52e-07,21;UBERON:0001869,1.52e-07,21;UBERON:0000203,1.52e-07,21|phase1_expression=1.12104192973356,0.348975407639361,0.454999239389536,0,0,0.503637815735669,0.233612640595526,0.129123323441576,0,0,0,0,0.171200729931206,0.174840804837995,0,0,0,0.157731082679119,0.274228867211478,0,3.57181818634493,0.397163804803541,0,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0.504060259519861,0,0,0,0,0.577703239502549,0.332469290716985,0,0.837063261473815,0.7813353445238,0.523523743973798,0,0,0,0.503587271902309,0.202753862439029,0.550640256485045,0,0.872100625521786,0,0.972149495371417,0.699932108126813,0,0,0,0,0.257259436035947,1.14613375975503,0.515672092277442,0.202316460859598,1.5869729378161,0.633831403506179,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0.384218305321555,0.207379224616955,0.675029691658453,0.841299845405528,1.71390590642282,1.54607978666129,1.5923803897944,0.958454710182364,0.919218786610021,2.20231761998777,1.27687338085188,2.61131106535614,0.659431438650969,1.9212405156506,1.04182674111352,2.79182999001381,2.25105044012672,1.5279824777681,4.12480019663135,2.42031857358475,0.745597783301202,0.908714319998209,1.28471652181535,0.289864488701678,0.860423876981386,0,0,1.29955283489534,1.34408066129201,0.842666520790511,0.852151612890289,0.779358013808606,0.35333957451034,0.704217098883403,1.28326477414318,0,0,0,0,0.505524445014783,0.79928715803342,0.517875767294343,0,0.346970653532272,0.304465478312141,1.15307748628029,0.301445281105245,0.705532242814229,0.753999547978053,0.494389935468748,0.433798070759735,0,0.485300549842228,0.662524555381181,1.45462575940567,0,1.46390398505774,1.67557365450764,0.510914110417183,0.359445373517761,0,0.381210681219194,1.9472783122627,3.20250421973039,1.00523481690292,1.73824320192276,1.02286182932132,1.87009240103604,0.486723789203273,0.712875546952214,0.746441823660558,0,1.05220927943237,0.780722657776222,0.919608417733892,0.900310649026746,0.60281927134286,0.95251098811859,0.512454881139399,1.78033276663485,1.29351685369508,0.431135985865684,0.567318240503458,0.879755620819744,0.876782929710299,0.278047249225598,0.696504333044333,1.02891068203972,0.995171334092466,0.702213187313235,1.02939162845886,0.568326998791185,0.207125772535502,1.17263029990548,0.36012412292203,1.65721314909647,1.37734962223183,1.07986979021165,1.39520366850245,1.87791380979733,0.700592054203017,0.822799249567402,1.14917224855367,0.972825714550269,1.31579988682799,1.75640092232841,2.14730270016595,1.47202963994889,1.85228302282712,0.660837565967596,0,1.2797295032114,0.928946687441754,0.515469845288373,0.605050573870028,0.667134131534611,0.380451252225118,0.474529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| ||
|EntrezGene=56535 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=E9QA46,Q3UIG2,Q9QXY9 | |||
|association_with_transcript=0bp_to_ENSMUST00000170376,NM_001164195,NM_019961,uc007ekx.2,uc007eky.2_5end | |||
|description=CAGE_peak_4_at_Pex3_5end | |||
|id=chr10:13272946..13272959,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.55e-15!63;UBERON:0001049!1.50e-13!52;UBERON:0005068!1.50e-13!52;UBERON:0006241!1.50e-13!52;UBERON:0007135!1.50e-13!52;UBERON:0000955!5.63e-13!50;UBERON:0006238!5.63e-13!50;UBERON:0002346!1.25e-12!71;UBERON:0003075!1.25e-12!71;UBERON:0007284!1.25e-12!71;UBERON:0002616!2.11e-12!49;UBERON:0000073!3.36e-12!75;UBERON:0001016!3.36e-12!75;UBERON:0002020!9.51e-12!34;UBERON:0001017!1.06e-11!73;UBERON:0005743!1.06e-11!73;UBERON:0004121!1.26e-11!102;UBERON:0000924!1.26e-11!102;UBERON:0006601!1.26e-11!102;UBERON:0003056!5.37e-11!49;UBERON:0003080!7.15e-10!40;UBERON:0002791!1.06e-09!29;UBERON:0003528!1.06e-09!29;UBERON:0001893!1.06e-09!29;UBERON:0002780!2.25e-09!39;UBERON:0001890!2.25e-09!39;UBERON:0006240!2.25e-09!39;UBERON:0004111!2.25e-09!122;UBERON:0000025!1.13e-07!114;UBERON:0002619!2.73e-07!17;UBERON:0002021!4.53e-07!10;UBERON:0000411!4.53e-07!10;UBERON:0001950!4.53e-07!10;UBERON:0000956!7.41e-07!21;UBERON:0001869!7.41e-07!21;UBERON:0000203!7.41e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.65e-17,54;UBERON:0010314,1.00e-16,92;UBERON:0001049,4.50e-16,52;UBERON:0005068,4.50e-16,52;UBERON:0006241,4.50e-16,52;UBERON:0007135,4.50e-16,52;UBERON:0002346,2.30e-14,64;UBERON:0003075,2.30e-14,64;UBERON:0007284,2.30e-14,64;UBERON:0001016,2.36e-14,75;UBERON:0001017,3.15e-14,73;UBERON:0002020,4.45e-14,34;UBERON:0000955,1.50e-13,47;UBERON:0006238,1.50e-13,47;UBERON:0002616,9.90e-13,46;UBERON:0004121,2.88e-12,95;UBERON:0000924,2.88e-12,95;UBERON:0006601,2.88e-12,95;UBERON:0010371,9.14e-12,73;UBERON:0003528,1.65e-11,29;UBERON:0002791,1.65e-11,29;UBERON:0001893,1.65e-11,29;UBERON:0003080,5.27e-11,40;UBERON:0004111,8.33e-11,122;UBERON:0002021,1.17e-10,10;UBERON:0000411,1.17e-10,10;UBERON:0001950,1.17e-10,10;UBERON:0002780,2.79e-10,39;UBERON:0001890,2.79e-10,39;UBERON:0006240,2.79e-10,39;UBERON:0003056,6.51e-10,49;UBERON:0000025,5.24e-09,114;UBERON:0002619,8.42e-09,17;UBERON:0000956,1.52e-07,21;UBERON:0001869,1.52e-07,21;UBERON:0000203,1.52e-07,21 | |||
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| |||
|short_description=p4@Pex3 | |||
}} | |||
Revision as of 16:15, 12 September 2013
| Short description: | p4@Pex3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Pex3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:60 |
| Association with transcript: | 0bp_to_ENSMUST00000170376, NM_001164195, NM_019961, uc007ekx.2, uc007eky.2_5end |
| EntrezGene: | Pex3 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
