FFCP PHASE1:Mm9::chr8:86939725..86939735,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:86939725..86939735,+|id=chr8:86939725..86939735,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.70e-14!52;UBERON:0005068!1.70e-14!52;UBERON:0006241!1.70e-14!52;UBERON:0007135!1.70e-14!52;UBERON:0000955!2.76e-13!50;UBERON:0006238!2.76e-13!50;UBERON:0000033!1.90e-12!63;UBERON:0002346!4.57e-12!71;UBERON:0003075!4.57e-12!71;UBERON:0007284!4.57e-12!71;UBERON:0001017!7.07e-12!73;UBERON:0005743!7.07e-12!73;UBERON:0002616!7.27e-12!49;UBERON:0000073!1.92e-11!75;UBERON:0001016!1.92e-11!75;UBERON:0002020!3.63e-10!34;UBERON:0003056!5.52e-10!49;UBERON:0003080!1.11e-09!40;UBERON:0004121!3.83e-09!102;UBERON:0000924!3.83e-09!102;UBERON:0006601!3.83e-09!102;UBERON:0002780!2.15e-08!39;UBERON:0001890!2.15e-08!39;UBERON:0006240!2.15e-08!39;UBERON:0002791!2.58e-08!29;UBERON:0003528!2.58e-08!29;UBERON:0001893!2.58e-08!29;UBERON:0000956!4.72e-08!21;UBERON:0001869!4.72e-08!21;UBERON:0000203!4.72e-08!21;UBERON:0007811!5.02e-08!86;UBERON:0002021!9.37e-08!10;UBERON:0000411!9.37e-08!10;UBERON:0001950!9.37e-08!10;UBERON:0000153!5.30e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.52e-23,4;UBERON:0002680,6.52e-23,4;UBERON:0001895,6.52e-23,4;UBERON:0010092,6.52e-23,4;UBERON:0006215,6.52e-23,4;UBERON:0004733,8.02e-16,6;UBERON:0004732,8.02e-16,6;UBERON:0002028,8.02e-16,6;UBERON:0007277,8.02e-16,6;UBERON:0003076,1.13e-08,12;UBERON:0003057,1.13e-08,12|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.589257170947335,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,9.00620839297857,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0,0,0.859265911718438,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:86939725..86939735,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:86939725..86939735,+ | |||
|id=chr8:86939725..86939735,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.70e-14!52;UBERON:0005068!1.70e-14!52;UBERON:0006241!1.70e-14!52;UBERON:0007135!1.70e-14!52;UBERON:0000955!2.76e-13!50;UBERON:0006238!2.76e-13!50;UBERON:0000033!1.90e-12!63;UBERON:0002346!4.57e-12!71;UBERON:0003075!4.57e-12!71;UBERON:0007284!4.57e-12!71;UBERON:0001017!7.07e-12!73;UBERON:0005743!7.07e-12!73;UBERON:0002616!7.27e-12!49;UBERON:0000073!1.92e-11!75;UBERON:0001016!1.92e-11!75;UBERON:0002020!3.63e-10!34;UBERON:0003056!5.52e-10!49;UBERON:0003080!1.11e-09!40;UBERON:0004121!3.83e-09!102;UBERON:0000924!3.83e-09!102;UBERON:0006601!3.83e-09!102;UBERON:0002780!2.15e-08!39;UBERON:0001890!2.15e-08!39;UBERON:0006240!2.15e-08!39;UBERON:0002791!2.58e-08!29;UBERON:0003528!2.58e-08!29;UBERON:0001893!2.58e-08!29;UBERON:0000956!4.72e-08!21;UBERON:0001869!4.72e-08!21;UBERON:0000203!4.72e-08!21;UBERON:0007811!5.02e-08!86;UBERON:0002021!9.37e-08!10;UBERON:0000411!9.37e-08!10;UBERON:0001950!9.37e-08!10;UBERON:0000153!5.30e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.52e-23,4;UBERON:0002680,6.52e-23,4;UBERON:0001895,6.52e-23,4;UBERON:0010092,6.52e-23,4;UBERON:0006215,6.52e-23,4;UBERON:0004733,8.02e-16,6;UBERON:0004732,8.02e-16,6;UBERON:0002028,8.02e-16,6;UBERON:0007277,8.02e-16,6;UBERON:0003076,1.13e-08,12;UBERON:0003057,1.13e-08,12 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.589257170947335,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,9.00620839297857,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0,0,0.859265911718438,0.685082519770642,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:86939725..86939735,+ | |||
}} |
Revision as of 16:16, 14 September 2013
Short description: | p@chr8:86939725..86939735, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:86939725..86939735, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.52e-23 | 4 |
regional part of metencephalon | 6.52e-23 | 4 |
metencephalon | 6.52e-23 | 4 |
future metencephalon | 6.52e-23 | 4 |
rhombic lip | 6.52e-23 | 4 |
segmental subdivision of hindbrain | 8.02e-16 | 6 |
segmental subdivision of nervous system | 8.02e-16 | 6 |
hindbrain | 8.02e-16 | 6 |
presumptive hindbrain | 8.02e-16 | 6 |
posterior neural tube | 1.13e-08 | 12 |
chordal neural plate | 1.13e-08 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.