FFCP PHASE1:Mm9::chr11:103815311..103815328,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18195|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=9bp_to_ENSMUST00000107009,ENSMUST00000145126_5end|description=CAGE_peak_2_at_Nsf_5end|id=chr11:103815311..103815328,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.01e-09!51;UBERON:0001049!8.36e-09!52;UBERON:0005068!8.36e-09!52;UBERON:0006241!8.36e-09!52;UBERON:0007135!8.36e-09!52;UBERON:0000955!3.55e-08!50;UBERON:0006238!3.55e-08!50;UBERON:0002346!9.83e-08!71;UBERON:0003075!9.83e-08!71;UBERON:0007284!9.83e-08!71;UBERON:0002616!1.00e-07!49;UBERON:0002021!4.22e-07!10;UBERON:0000411!4.22e-07!10;UBERON:0001950!4.22e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.56e-10,54;UBERON:0007023,2.01e-09,51;UBERON:0001049,8.36e-09,52;UBERON:0005068,8.36e-09,52;UBERON:0006241,8.36e-09,52;UBERON:0007135,8.36e-09,52;UBERON:0002021,4.22e-07,10;UBERON:0000411,4.22e-07,10;UBERON:0001950,4.22e-07,10;UBERON:0000955,8.31e-07,47;UBERON:0006238,8.31e-07,47|phase1_expression=2.88267924788629,5.58360652222978,1.81999695755814,3.93203474698879,2.50447864973174,3.18970616632591,7.70921713965235,7.23090611272827,1.40788722151667,2.57470978954193,3.93801326918661,4.06838010876216,7.53283211697305,8.47977903464275,3.99731714178795,6.88415909125408,4.19737126876888,10.7257136221801,15.76815986466,13.1560792057389,8.84450217571126,6.25532992565577,4.4403964153619,6.23970448894286,6.19405058881359,2.29692785646008,3.4460959692726,4.74036711908956,5.70070258369122,5.04060259519861,5.54326276638262,2.54012269383853,4.92051830067656,0,2.59966457776147,0.997407872150954,1.63335485009895,4.60384793810598,6.2506827561904,6.28228492768558,2.35292595212406,3.41522742479223,3.88408282424923,3.77690453926732,3.85232338634155,4.03802854755699,2.34717403304412,2.39827672018491,2.19686182734472,4.27745777963423,3.21968769738334,1.43752564364972,12.751478060388,5.07753499407941,6.04968838456435,2.31533492432352,5.44413535883638,10.3134418455488,5.86717736492834,12.1667925232568,9.50747105259269,3.38844532069132,2.66788438833342,2.6996991518442,1.97773272513395,2.8419204597844,0.898800331555214,0.768436610643109,1.97010263386108,1.89008313664367,1.89292465216244,15.7108041422092,15.9025349485162,2.32732518508413,2.68367318851062,2.75765635983006,20.9220173898839,31.9218345212969,27.9563890526363,8.70449499019279,13.2657083223494,7.8137005583514,28.4766658981409,28.138130501584,19.0997809721013,11.490514833473,14.8066548031067,10.6247684120421,5.07365495332333,3.92972112555285,5.79728977403356,3.44169550792555,0.679971333707751,1.61910957491345,0,0.896053774194671,7.44355426698285,6.64678258054425,5.45550609666024,4.24007489412408,2.81686839553361,10.2661181931454,12.7402619853323,0,1.94841936910093,2.02687892380079,2.02209778005913,5.48082622651488,26.4116641320115,11.7269289861212,6.07198643681475,4.56698217468212,8.30215790121811,8.28974523039424,6.34979018532806,6.6603293404728,12.8541383221874,6.07317299063629,6.19227386364912,4.04417124868523,5.07935492458905,6.30337829075789,7.45567044872489,38.6470652055242,34.3492599174066,6.89734049063197,3.83408398418945,4.19931911695385,2.03312363316904,43.2894947879938,18.3000241127451,3.14135880282161,34.4172153980707,25.5715457330331,35.9473317088039,24.4984307232314,2.34230536855727,6.34475550111474,7.07623723614289,11.1534183619831,4.03373373184381,2.75882525320168,4.14142898552303,4.52114453507145,3.40182495756639,6.14945857367279,5.62210347358373,16.557015727297,4.31135985865684,6.99692496620931,5.98233822157426,3.72632745126877,4.72680323683516,4.52727816478817,4.93877127379064,4.97585667046233,2.80885274925294,3.60287069960601,1.13665399758237,5.17814431338755,3.51789089971644,5.04173772090842,5.20838418287463,5.1158700254325,4.47374627373397,4.41814495025775,4.82892122519315,3.97002164048376,5.59503489705834,5.74586124276833,5.35054143002648,5.70179950958796,7.68425403518677,4.2946054003319,32.5949420274397,5.24813523134351,9.58214470653014,7.40461586657924,4.47905326123991,4.87697010906921,5.02583099156164,5.24377164020691,6.22658522765637,8.17970192284004,7.11793592316767,6.0938613247884,7.03738584640755,5.37182474511107,7.21367122340745,8.08937467788799,6.48414149624083,7.36822711041159,3.22435431620239,4.34144347916969,13.5249282807697,5.7022371796688,4.46090720485539,3.64706263429657,5.88099795255593,7.67572769493931,6.75094529717912,7.40382983530803,2.66807364378434,5.00535317148282,5.89676985339609,5.17182858485164,5.07150303471257,2.894125917029,3.31013607315846,3.74004978686054,3.89124544260085,3.56929837144506,4.31304619582064,2.23284568601102,4.99260276983297,4.04126204715379,1.97337154874103,1.4473305640901,9.23765950833023,4.16881105895066,5.70377417547091,6.62005834523234,3.52035372432753,8.04030035720716,6.9032655856944,6.43941037930736,7.56648691709717,4.87222317227305,6.53764551495697,7.37384916220821,6.73471429276993,8.10034728056465,1.50791283939272,9.79030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| ||
|EntrezGene=18195 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENSMUST00000107009,ENSMUST00000145126_5end | |||
|description=CAGE_peak_2_at_Nsf_5end | |||
|id=chr11:103815311..103815328,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.01e-09!51;UBERON:0001049!8.36e-09!52;UBERON:0005068!8.36e-09!52;UBERON:0006241!8.36e-09!52;UBERON:0007135!8.36e-09!52;UBERON:0000955!3.55e-08!50;UBERON:0006238!3.55e-08!50;UBERON:0002346!9.83e-08!71;UBERON:0003075!9.83e-08!71;UBERON:0007284!9.83e-08!71;UBERON:0002616!1.00e-07!49;UBERON:0002021!4.22e-07!10;UBERON:0000411!4.22e-07!10;UBERON:0001950!4.22e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.56e-10,54;UBERON:0007023,2.01e-09,51;UBERON:0001049,8.36e-09,52;UBERON:0005068,8.36e-09,52;UBERON:0006241,8.36e-09,52;UBERON:0007135,8.36e-09,52;UBERON:0002021,4.22e-07,10;UBERON:0000411,4.22e-07,10;UBERON:0001950,4.22e-07,10;UBERON:0000955,8.31e-07,47;UBERON:0006238,8.31e-07,47 | |||
|phase1_expression=2.88267924788629,5.58360652222978,1.81999695755814,3.93203474698879,2.50447864973174,3.18970616632591,7.70921713965235,7.23090611272827,1.40788722151667,2.57470978954193,3.93801326918661,4.06838010876216,7.53283211697305,8.47977903464275,3.99731714178795,6.88415909125408,4.19737126876888,10.7257136221801,15.76815986466,13.1560792057389,8.84450217571126,6.25532992565577,4.4403964153619,6.23970448894286,6.19405058881359,2.29692785646008,3.4460959692726,4.74036711908956,5.70070258369122,5.04060259519861,5.54326276638262,2.54012269383853,4.92051830067656,0,2.59966457776147,0.997407872150954,1.63335485009895,4.60384793810598,6.2506827561904,6.28228492768558,2.35292595212406,3.41522742479223,3.88408282424923,3.77690453926732,3.85232338634155,4.03802854755699,2.34717403304412,2.39827672018491,2.19686182734472,4.27745777963423,3.21968769738334,1.43752564364972,12.751478060388,5.07753499407941,6.04968838456435,2.31533492432352,5.44413535883638,10.3134418455488,5.86717736492834,12.1667925232568,9.50747105259269,3.38844532069132,2.66788438833342,2.6996991518442,1.97773272513395,2.8419204597844,0.898800331555214,0.768436610643109,1.97010263386108,1.89008313664367,1.89292465216244,15.7108041422092,15.9025349485162,2.32732518508413,2.68367318851062,2.75765635983006,20.9220173898839,31.9218345212969,27.9563890526363,8.70449499019279,13.2657083223494,7.8137005583514,28.4766658981409,28.138130501584,19.0997809721013,11.490514833473,14.8066548031067,10.6247684120421,5.07365495332333,3.92972112555285,5.79728977403356,3.44169550792555,0.679971333707751,1.61910957491345,0,0.896053774194671,7.44355426698285,6.64678258054425,5.45550609666024,4.24007489412408,2.81686839553361,10.2661181931454,12.7402619853323,0,1.94841936910093,2.02687892380079,2.02209778005913,5.48082622651488,26.4116641320115,11.7269289861212,6.07198643681475,4.56698217468212,8.30215790121811,8.28974523039424,6.34979018532806,6.6603293404728,12.8541383221874,6.07317299063629,6.19227386364912,4.04417124868523,5.07935492458905,6.30337829075789,7.45567044872489,38.6470652055242,34.3492599174066,6.89734049063197,3.83408398418945,4.19931911695385,2.03312363316904,43.2894947879938,18.3000241127451,3.14135880282161,34.4172153980707,25.5715457330331,35.9473317088039,24.4984307232314,2.34230536855727,6.34475550111474,7.07623723614289,11.1534183619831,4.03373373184381,2.75882525320168,4.14142898552303,4.52114453507145,3.40182495756639,6.14945857367279,5.62210347358373,16.557015727297,4.31135985865684,6.99692496620931,5.98233822157426,3.72632745126877,4.72680323683516,4.52727816478817,4.93877127379064,4.97585667046233,2.80885274925294,3.60287069960601,1.13665399758237,5.17814431338755,3.51789089971644,5.04173772090842,5.20838418287463,5.1158700254325,4.47374627373397,4.41814495025775,4.82892122519315,3.97002164048376,5.59503489705834,5.74586124276833,5.35054143002648,5.70179950958796,7.68425403518677,4.2946054003319,32.5949420274397,5.24813523134351,9.58214470653014,7.40461586657924,4.47905326123991,4.87697010906921,5.02583099156164,5.24377164020691,6.22658522765637,8.17970192284004,7.11793592316767,6.0938613247884,7.03738584640755,5.37182474511107,7.21367122340745,8.08937467788799,6.48414149624083,7.36822711041159,3.22435431620239,4.34144347916969,13.5249282807697,5.7022371796688,4.46090720485539,3.64706263429657,5.88099795255593,7.67572769493931,6.75094529717912,7.40382983530803,2.66807364378434,5.00535317148282,5.89676985339609,5.17182858485164,5.07150303471257,2.894125917029,3.31013607315846,3.74004978686054,3.89124544260085,3.56929837144506,4.31304619582064,2.23284568601102,4.99260276983297,4.04126204715379,1.97337154874103,1.4473305640901,9.23765950833023,4.16881105895066,5.70377417547091,6.62005834523234,3.52035372432753,8.04030035720716,6.9032655856944,6.43941037930736,7.56648691709717,4.87222317227305,6.53764551495697,7.37384916220821,6.73471429276993,8.10034728056465,1.50791283939272,9.79030230873677,2.45882136509518,6.34654516500885,39.6559957269846,35.8667760972142,1.80328439914343,3.02965112645248,2.52406575533005,2.34263246577983,2.36965737506079,2.38968797952552,2.22798674082394,2.54768877709949,5.66734982344852,3.21481443702443,1.97643888973262,24.0990987316355,6.52924391958036,4.62970569534864,2.60619134965722,4.45419332025846,11.9470624505967,3.8844901784797,5.74414758233027,8.11001842950362,5.02013217897314,6.45613810682248,4.13485269069154,3.99887102425256,3.56497378384721,7.58488219045958,4.21674434299995,6.18813259489121,13.2771446243977,3.78128297465751,4.52755393239641,4.92975180572662,6.20690817747958,5.70780216326626,6.58196082408484,5.78483403317739,5.16277757740163,4.87213762986786,7.05690873775878,5.44124634706884,4.03661066739764,5.54878909339034,4.05865969610664,5.74493149107714,5.53813589596716,38.568462818186,9.7396402054776,3.50857675537478,5.37064129372164,4.70921142511728,8.61173634642459,8.00723606222829,0.849892149969277,1.81936888020755,1.93479963326193,1.90934123603023,4.9032079005076,6.50622294805916,5.18425635944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| |||
|short_description=p2@Nsf | |||
}} |
Revision as of 18:26, 12 September 2013
Short description: | p2@Nsf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nsf_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 9bp_to_ENSMUST00000107009, ENSMUST00000145126_5end |
EntrezGene: | Nsf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.56e-10 | 54 |
adult organism | 2.01e-09 | 51 |
neural tube | 8.36e-09 | 52 |
neural rod | 8.36e-09 | 52 |
future spinal cord | 8.36e-09 | 52 |
neural keel | 8.36e-09 | 52 |
occipital lobe | 4.22e-07 | 10 |
visual cortex | 4.22e-07 | 10 |
neocortex | 4.22e-07 | 10 |
brain | 8.31e-07 | 47 |
future brain | 8.31e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.