FFCP PHASE1:Mm9::chr13:69878723..69878767,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76980|HGNC=|MCL_coexpression_id=13|UniProt=E9QMD2,A0PJN4|association_with_transcript=7bp_to_ENSMUST00000065118,NM_001145162,uc007rcp.2_5end|description=CAGE_peak_1_at_Ube2ql1_5end|id=chr13:69878723..69878767,-|ontology_enrichment_celltype=CL:0000540!2.91e-15!33;CL:0000047!2.91e-15!33;CL:0000031!2.91e-15!33;CL:0000404!2.91e-15!33;CL:0000117!6.35e-15!23;CL:0000337!6.35e-15!23;CL:0000221!1.21e-14!44;CL:0000133!1.21e-14!44;CL:0002319!1.85e-14!43;CL:0000393!3.07e-12!39;CL:0000211!3.07e-12!39;CL:0000055!2.64e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.64e-16,33;CL:0000047,1.64e-16,33;CL:0000031,1.64e-16,33;CL:0000404,1.64e-16,33;CL:0000117,3.86e-16,23;CL:0000337,3.86e-16,23;CL:0000221,2.03e-15,44;CL:0000133,2.03e-15,44;CL:0002319,3.22e-15,43;CL:0000393,3.69e-12,39;CL:0000211,3.69e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.98e-30!73;UBERON:0005743!2.98e-30!73;UBERON:0000073!3.76e-30!75;UBERON:0001016!3.76e-30!75;UBERON:0004121!2.42e-26!102;UBERON:0000924!2.42e-26!102;UBERON:0006601!2.42e-26!102;UBERON:0002346!5.47e-25!71;UBERON:0003075!5.47e-25!71;UBERON:0007284!5.47e-25!71;UBERON:0001049!1.04e-24!52;UBERON:0005068!1.04e-24!52;UBERON:0006241!1.04e-24!52;UBERON:0007135!1.04e-24!52;UBERON:0000033!1.98e-24!63;UBERON:0000955!5.14e-23!50;UBERON:0006238!5.14e-23!50;UBERON:0002616!2.20e-22!49;UBERON:0002020!5.39e-20!34;UBERON:0003056!7.25e-20!49;UBERON:0003080!1.81e-18!40;UBERON:0002780!5.93e-18!39;UBERON:0001890!5.93e-18!39;UBERON:0006240!5.93e-18!39;UBERON:0002791!1.50e-16!29;UBERON:0003528!1.50e-16!29;UBERON:0001893!1.50e-16!29;UBERON:0000153!1.74e-15!94;UBERON:0007811!5.44e-15!86;UBERON:0000956!1.72e-12!21;UBERON:0001869!1.72e-12!21;UBERON:0000203!1.72e-12!21;UBERON:0002619!8.14e-10!17;UBERON:0000025!1.95e-08!114;UBERON:0004111!3.23e-08!122;UBERON:0002021!7.78e-08!10;UBERON:0000411!7.78e-08!10;UBERON:0001950!7.78e-08!10;UBERON:0000468!2.57e-07!333;UBERON:0003076!7.98e-07!12;UBERON:0003057!7.98e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.23e-32,73;UBERON:0001016,2.83e-32,75;UBERON:0002346,4.31e-29,64;UBERON:0003075,4.31e-29,64;UBERON:0007284,4.31e-29,64;UBERON:0004121,1.05e-28,95;UBERON:0000924,1.05e-28,95;UBERON:0006601,1.05e-28,95;UBERON:0000073,3.13e-28,54;UBERON:0001049,7.99e-27,52;UBERON:0005068,7.99e-27,52;UBERON:0006241,7.99e-27,52;UBERON:0007135,7.99e-27,52;UBERON:0010371,4.74e-24,73;UBERON:0000955,4.93e-23,47;UBERON:0006238,4.93e-23,47;UBERON:0010314,1.15e-22,92;UBERON:0002616,2.34e-22,46;UBERON:0002020,1.12e-21,34;UBERON:0003056,1.55e-21,49;UBERON:0003080,5.20e-20,40;UBERON:0002780,1.90e-19,39;UBERON:0001890,1.90e-19,39;UBERON:0006240,1.90e-19,39;UBERON:0003528,6.45e-18,29;UBERON:0002791,6.45e-18,29;UBERON:0001893,6.45e-18,29;UBERON:0000956,1.74e-13,21;UBERON:0001869,1.74e-13,21;UBERON:0000203,1.74e-13,21;UBERON:0002619,1.44e-10,17;UBERON:0002021,2.08e-08,10;UBERON:0000411,2.08e-08,10;UBERON:0001950,2.08e-08,10;UBERON:0003076,2.63e-07,12;UBERON:0003057,2.63e-07,12|phase1_expression=15.6945870162698,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3018615013931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.811015449756117,4.03802854755699,3.12956537739216,6.75877984779384,1.75748946187577,1.94429899074283,0.839918529752175,2.87505128729943,0,0,0,0.514518872071894,0.573066879877513,0,145.87016827977,156.05233888525,160.99317649057,0.677689064138264,0.889294796111139,0,1.97773272513395,0,3.89480143673926,4.61061966385865,232.575800407915,262.046526301812,286.883247283285,205.383057786335,172.940067565113,179.938984046767,132.554286418221,170.974694309464,106.812404569407,114.918604276669,122.731620071739,121.731043574969,96.6109516441446,103.661760740795,117.25685958058,101.860032415734,93.359729391631,224.212353545461,148.493663073464,228.712120027644,1.8931548333296,3.32514864469856,0.579728977403356,0,3.39985666853875,2.15881276655127,0.649776417447669,0,7.02222100658759,0,0,0,7.32385782838739,0,0,0,0,0,0,5.1382745873577,0.517875767294343,1.48442139064825,0.693941307064543,0.913396434936424,1.84492397804847,2.11011696773672,1.99900802130698,1.13099932196708,2.47194967734374,1.01219549843938,0,1.94120219936891,1.76673214768315,0.969750506270444,0,42.4532155666743,70.1646467825074,0,0.239630249011841,0,0,91.9714525945611,64.5075849974263,71.4973263522198,138.364158873052,149.849257995574,74.1803319077629,82.5808029014886,1.12023300235348,2.48813941220186,0.758168275301024,4.8401626853889,1.30120442962704,6.66716102857071,9.36323074987816,7.08312643827861,16.600905792924,14.9893052733274,14.3363638576385,15.0047955028629,2.15567992932842,11.3463648100692,14.6039433056078,7.67185063496512,3.61461423993277,2.089512999133,0.823128545631774,2.7864797354589,0,0,0,1.86413195281952,1.40715635988658,1.44049649168812,2.13070262026689,1.37734962223183,1.3884040159864,0.232533944750408,0.804820204198858,1.05088808130453,1.31647879930784,2.62667942526552,3.56702762001765,7.602399346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| ||
|EntrezGene=76980 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=E9QMD2,A0PJN4 | |||
|association_with_transcript=7bp_to_ENSMUST00000065118,NM_001145162,uc007rcp.2_5end | |||
|description=CAGE_peak_1_at_Ube2ql1_5end | |||
|id=chr13:69878723..69878767,- | |||
|ontology_enrichment_celltype=CL:0000540!2.91e-15!33;CL:0000047!2.91e-15!33;CL:0000031!2.91e-15!33;CL:0000404!2.91e-15!33;CL:0000117!6.35e-15!23;CL:0000337!6.35e-15!23;CL:0000221!1.21e-14!44;CL:0000133!1.21e-14!44;CL:0002319!1.85e-14!43;CL:0000393!3.07e-12!39;CL:0000211!3.07e-12!39;CL:0000055!2.64e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.64e-16,33;CL:0000047,1.64e-16,33;CL:0000031,1.64e-16,33;CL:0000404,1.64e-16,33;CL:0000117,3.86e-16,23;CL:0000337,3.86e-16,23;CL:0000221,2.03e-15,44;CL:0000133,2.03e-15,44;CL:0002319,3.22e-15,43;CL:0000393,3.69e-12,39;CL:0000211,3.69e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.98e-30!73;UBERON:0005743!2.98e-30!73;UBERON:0000073!3.76e-30!75;UBERON:0001016!3.76e-30!75;UBERON:0004121!2.42e-26!102;UBERON:0000924!2.42e-26!102;UBERON:0006601!2.42e-26!102;UBERON:0002346!5.47e-25!71;UBERON:0003075!5.47e-25!71;UBERON:0007284!5.47e-25!71;UBERON:0001049!1.04e-24!52;UBERON:0005068!1.04e-24!52;UBERON:0006241!1.04e-24!52;UBERON:0007135!1.04e-24!52;UBERON:0000033!1.98e-24!63;UBERON:0000955!5.14e-23!50;UBERON:0006238!5.14e-23!50;UBERON:0002616!2.20e-22!49;UBERON:0002020!5.39e-20!34;UBERON:0003056!7.25e-20!49;UBERON:0003080!1.81e-18!40;UBERON:0002780!5.93e-18!39;UBERON:0001890!5.93e-18!39;UBERON:0006240!5.93e-18!39;UBERON:0002791!1.50e-16!29;UBERON:0003528!1.50e-16!29;UBERON:0001893!1.50e-16!29;UBERON:0000153!1.74e-15!94;UBERON:0007811!5.44e-15!86;UBERON:0000956!1.72e-12!21;UBERON:0001869!1.72e-12!21;UBERON:0000203!1.72e-12!21;UBERON:0002619!8.14e-10!17;UBERON:0000025!1.95e-08!114;UBERON:0004111!3.23e-08!122;UBERON:0002021!7.78e-08!10;UBERON:0000411!7.78e-08!10;UBERON:0001950!7.78e-08!10;UBERON:0000468!2.57e-07!333;UBERON:0003076!7.98e-07!12;UBERON:0003057!7.98e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.23e-32,73;UBERON:0001016,2.83e-32,75;UBERON:0002346,4.31e-29,64;UBERON:0003075,4.31e-29,64;UBERON:0007284,4.31e-29,64;UBERON:0004121,1.05e-28,95;UBERON:0000924,1.05e-28,95;UBERON:0006601,1.05e-28,95;UBERON:0000073,3.13e-28,54;UBERON:0001049,7.99e-27,52;UBERON:0005068,7.99e-27,52;UBERON:0006241,7.99e-27,52;UBERON:0007135,7.99e-27,52;UBERON:0010371,4.74e-24,73;UBERON:0000955,4.93e-23,47;UBERON:0006238,4.93e-23,47;UBERON:0010314,1.15e-22,92;UBERON:0002616,2.34e-22,46;UBERON:0002020,1.12e-21,34;UBERON:0003056,1.55e-21,49;UBERON:0003080,5.20e-20,40;UBERON:0002780,1.90e-19,39;UBERON:0001890,1.90e-19,39;UBERON:0006240,1.90e-19,39;UBERON:0003528,6.45e-18,29;UBERON:0002791,6.45e-18,29;UBERON:0001893,6.45e-18,29;UBERON:0000956,1.74e-13,21;UBERON:0001869,1.74e-13,21;UBERON:0000203,1.74e-13,21;UBERON:0002619,1.44e-10,17;UBERON:0002021,2.08e-08,10;UBERON:0000411,2.08e-08,10;UBERON:0001950,2.08e-08,10;UBERON:0003076,2.63e-07,12;UBERON:0003057,2.63e-07,12 | |||
|phase1_expression=15.6945870162698,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,23.3018615013931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.811015449756117,4.03802854755699,3.12956537739216,6.75877984779384,1.75748946187577,1.94429899074283,0.839918529752175,2.87505128729943,0,0,0,0.514518872071894,0.573066879877513,0,145.87016827977,156.05233888525,160.99317649057,0.677689064138264,0.889294796111139,0,1.97773272513395,0,3.89480143673926,4.61061966385865,232.575800407915,262.046526301812,286.883247283285,205.383057786335,172.940067565113,179.938984046767,132.554286418221,170.974694309464,106.812404569407,114.918604276669,122.731620071739,121.731043574969,96.6109516441446,103.661760740795,117.25685958058,101.860032415734,93.359729391631,224.212353545461,148.493663073464,228.712120027644,1.8931548333296,3.32514864469856,0.579728977403356,0,3.39985666853875,2.15881276655127,0.649776417447669,0,7.02222100658759,0,0,0,7.32385782838739,0,0,0,0,0,0,5.1382745873577,0.517875767294343,1.48442139064825,0.693941307064543,0.913396434936424,1.84492397804847,2.11011696773672,1.99900802130698,1.13099932196708,2.47194967734374,1.01219549843938,0,1.94120219936891,1.76673214768315,0.969750506270444,0,42.4532155666743,70.1646467825074,0,0.239630249011841,0,0,91.9714525945611,64.5075849974263,71.4973263522198,138.364158873052,149.849257995574,74.1803319077629,82.5808029014886,1.12023300235348,2.48813941220186,0.758168275301024,4.8401626853889,1.30120442962704,6.66716102857071,9.36323074987816,7.08312643827861,16.600905792924,14.9893052733274,14.3363638576385,15.0047955028629,2.15567992932842,11.3463648100692,14.6039433056078,7.67185063496512,3.61461423993277,2.089512999133,0.823128545631774,2.7864797354589,0,0,0,1.86413195281952,1.40715635988658,1.44049649168812,2.13070262026689,1.37734962223183,1.3884040159864,0.232533944750408,0.804820204198858,1.05088808130453,1.31647879930784,2.62667942526552,3.56702762001765,7.60239934611728,7.46470391989572,4.02619256281115,118.393241041604,89.012489708081,0,0.264450566663544,0.213288250535234,0.464473343720877,0.77320476793256,0.605050573870028,0.667134131534611,1.14135375667535,0.949058123089023,0.329397909448022,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0,2.27601481143698,1.37098215131675,2.25415471346161,1.4255592949172,0.581857461502877,2.03393877681924,1.39120381673366,1.18088118383682,0.941992367048249,1.35736880313981,0.592905254174298,0.500535317148282,0.589676985339609,0.899448449539415,0.811440485554012,1.68824011826692,0.763877555344259,0.287696137450811,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.184753190166605,2.27389694124582,1.46668478797823,0.509235257325564,0.938760993154008,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.797273843287435,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,93.1193421929193,94.9414661396846,0,3.02965112645248,5.04813151066011,5.0757036758563,11.6328634775711,2.62865677747807,5.34716817797746,5.66153061577665,4.45291771842384,4.09158201075837,3.16230222357219,144.915913706235,3.54850213020672,3.02711526234334,1.79175655288934,2.3095817216155,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,2.7235168460303,5.04171063287669,4.39819524861365,3.00071849044229,5.49754724291048,7.49149033928696,9.21474515371877,12.4830629136986,0.23467170806371,5.71946591332314,0.661585194164886,0.32977250588296,1.13025098687134,0.361877549568935,0.238744688006273,0.492422699235184,0.291480836629851,83.9976618107609,0,0.206386867963223,0.370389054739423,0.188368457004691,0,0,0.339956859987711,1.53946597556024,0.552799895217695,0,1.10717597753397,1.82987520414164,0.648032044930808,0.627264888043406,0.655087691238533,0.674321731924103,0.909188012978695,0.26175594198403,0.259229946583586,0.621339313086926,0,2.0932316446157,1.82004339502807,2.91676782516071,1.93739735216597,0.506868376472335,0.234714477291508,0.651021924219751,0.209718688851422,0,0,4.74016680942267,1.21635129174099,1.64337531463724,2.07873316764472,0.716106782669926,1.39076948346885,1.80293174279953,1.32920574457119,1.11063094942962,1.06689529317,1.51239277705261,2.14407337627455,1.53938946624527,2.22066114144981,2.0405734525369,1.99787358036658,5.11368982674011,3.02192309455341,2.12508553435409,2.43987218086537,4.39563898241436,0.857473516316263,0,188.062363591483,186.431720785407,187.909728408122,205.708259265394,165.104887264725,173.740596399631,166.055535057024,188.234262947724,186.241530092508,182.769390048392,14.3226539666164,32.7200396188845,23.0490367768081,14.8295097411659,32.4900402073373,24.2673431154019,17.7797382241292,16.8948746935893,26.9572136057125,22.9954462705056,16.2226751929753,16.7877443833608,17.1363958669885,20.8081745315825,18.3793500657962,16.1939855036245,20.859178670074,20.6412865896164,16.4834360321323,15.4558866141117,15.4291163573437,12.7782580434723,16.4520971063651,16.7148379127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| |||
|short_description=p1@Ube2ql1 | |||
}} |
Revision as of 01:03, 13 September 2013
Short description: | p1@Ube2ql1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ube2ql1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 7bp_to_ENSMUST00000065118, NM_001145162, uc007rcp.2_5end |
EntrezGene: | Ube2ql1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.64e-16 | 33 |
neuronal stem cell | 1.64e-16 | 33 |
neuroblast | 1.64e-16 | 33 |
electrically signaling cell | 1.64e-16 | 33 |
CNS neuron (sensu Vertebrata) | 3.86e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.86e-16 | 23 |
ectodermal cell | 2.03e-15 | 44 |
neurectodermal cell | 2.03e-15 | 44 |
neural cell | 3.22e-15 | 43 |
electrically responsive cell | 3.69e-12 | 39 |
electrically active cell | 3.69e-12 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.