FFCP PHASE1:Mm9::chr11:23977742..23977794,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14025|HGNC=|MCL_coexpression_id=706|UniProt=Q9QYE3,Q5STS7,Q3TP99,Q3US10,Q5STS9,Q5STS8|association_with_transcript=-261bp_to_ENSMUST00000000881,NM_001159289,NM_001242934,NM_016707,uc007ifs.2,uc007ift.2,uc007ifu.2,uc007ifv.2_5end|description=CAGE_peak_6_at_Bcl11a_5end|id=chr11:23977742..23977794,+|ontology_enrichment_celltype=CL:0000117!1.25e-10!23;CL:0000337!1.25e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-10,23;CL:0000337,4.03e-10,23;CL:0002609,1.38e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.50e-16!34;UBERON:0002791!4.99e-14!29;UBERON:0003528!4.99e-14!29;UBERON:0001893!4.99e-14!29;UBERON:0000956!9.47e-12!21;UBERON:0001869!9.47e-12!21;UBERON:0000203!9.47e-12!21;UBERON:0001049!6.50e-10!52;UBERON:0005068!6.50e-10!52;UBERON:0006241!6.50e-10!52;UBERON:0007135!6.50e-10!52;UBERON:0003080!9.34e-10!40;UBERON:0002780!1.46e-09!39;UBERON:0001890!1.46e-09!39;UBERON:0006240!1.46e-09!39;UBERON:0002619!4.77e-09!17;UBERON:0000955!1.00e-08!50;UBERON:0006238!1.00e-08!50;UBERON:0003056!1.67e-08!49;UBERON:0002616!3.49e-08!49;UBERON:0000033!5.01e-08!63;UBERON:0002021!2.73e-07!10;UBERON:0000411!2.73e-07!10;UBERON:0001950!2.73e-07!10;UBERON:0001017!8.02e-07!73;UBERON:0005743!8.02e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.69e-20,34;UBERON:0003528,2.00e-16,29;UBERON:0002791,2.00e-16,29;UBERON:0001893,2.00e-16,29;UBERON:0000956,7.60e-16,21;UBERON:0001869,7.60e-16,21;UBERON:0000203,7.60e-16,21;UBERON:0001049,4.37e-12,52;UBERON:0005068,4.37e-12,52;UBERON:0006241,4.37e-12,52;UBERON:0007135,4.37e-12,52;UBERON:0002619,4.62e-12,17;UBERON:0000073,7.09e-12,54;UBERON:0003080,7.63e-12,40;UBERON:0002780,1.42e-11,39;UBERON:0001890,1.42e-11,39;UBERON:0006240,1.42e-11,39;UBERON:0000955,1.91e-10,47;UBERON:0006238,1.91e-10,47;UBERON:0002616,1.03e-09,46;UBERON:0002021,1.36e-09,10;UBERON:0000411,1.36e-09,10;UBERON:0001950,1.36e-09,10;UBERON:0001017,5.15e-09,73;UBERON:0001016,1.88e-08,75;UBERON:0010371,2.54e-08,73;UBERON:0003056,6.02e-08,49;UBERON:0002346,9.30e-08,64;UBERON:0003075,9.30e-08,64;UBERON:0007284,9.30e-08,64|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,1.66554880907831,4.25198061518635,0.699561878128147,5.36285681109004,7.67840828192137,7.21462408056651,0.595303031057488,1.09220046320974,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0.380046838912748,0,0,0,0,0,0.866554859253824,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,4.53013036355888,0,0,0,0,0,6.06949382578793,4.23192783417626,5.07065122804943,0,0,0,0,0,0,0,21.8785081970888,22.1409738863973,21.2428210964896,2.57085885963423,1.98781686856452,17.1487118900936,18.7857123195743,17.4651569455904,1.10115880999389,0.766124028511126,0.768032666281217,3.16527090552465,2.65314166446988,2.08365348222704,0.558365998002762,0.56276261003168,0.61119299110724,4.12480019663135,3.98640706237488,10.0655700745662,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,10.616453229534,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.289198713839823,2.65383165584962,0.323533699894818,1.98757366614354,1.93950101254089,0,0,0,0.255457055208591,0.958520996047362,1.79970819298022,1.01656181658452,1.3481157546434,5.03250663100489,23.6230181972185,4.17178368461463,5.11430914660661,1.87009240103604,1.78465389374533,0.101839363850316,0.622034853050465,0,0,0.390361328888111,0.459804208866946,0,0.60281927134286,0.340182495756639,0.512454881139399,0.374806898238915,0.517406741478031,1.29340795759705,1.13463648100692,3.69497360744293,4.3839146485515,2.78047249225598,4.52727816478817,2.67516777330327,0.199034266818493,0.702213187313235,0.257347907114715,0,0.414251545071004,0.234526059981096,0,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,7.99101804543684,10.1875566255492,0,0,0.639864751605702,0,0.128867461322093,0.605050573870028,0.22237804384487,0.190225626112559,0,0,1.00534083520108,0.397912944082302,0.58489226135736,0,0.432276099749388,0.796565093017469,0,0,0,0,0.193952487167626,0,0,0,0,0,0,1.50160595144485,1.96558995113203,3.37293168577281,2.23146133527353,1.68824011826692,0,0.575392274901621,0.972811360650212,0.823684239564244,0,0,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,0.162964976442026,0.169745085775188,0,0.502518772325447,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,1.28440471990234,0.937693492737625,0,0,0,0.390438744296638,0,0,0,0,0,0,0,19.921921618152,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0,0,0,0,1.15420377059036,3.22928853391811,2.5934557719107,1.90995750405018,1.47726809770555,0,0.556275906031529,4.44264290074417,0,1.48155621895769,1.13021074202815,3.55404992074665,2.74533807847827,2.03974115992626,1.6794174278839,1.65839968565309,0.954670618015114,0.790839983952838,1.42323626988794,0.86404272657441,1.46361807210128,0.655087691238533,0.539457385539283,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0,1.01362607645082,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0,0.194915761479505,0,0,0.680191150845634,0,0,0,0,0,0,0.428736758158132,0,7.90652579663893,9.20650473014354,4.58316410751517,7.90524638780963,4.7955776383945,5.2877572817279,2.02506750069542,7.20513925158753,4.98456649882625,5.1776031175182,0.31136204275253,3.19219898720825,1.19513524027894,3.40349403895612,2.93458427679175,2.02227859295016,1.11123363900808,2.06035057238894,1.92551525755089,2.02157769411038,1.52087579934144,2.26351609663291,2.43467919421694,1.47257850531199,2.29741875822453,1.90517476513229,2.43357084484197,2.12200142510076,1.64834360321323,2.50238164228475,2.40008476669791,1.77475806159337,2.14592570952589,2.0348498328526,2.25862512996793,1.86152137361688,2.56099162021882,1.8414879800649,1.49384525230448,0,3.08451047122853,1.67457620038458,2.86461730218783,2.78886314134739,3.47231899766054,4.49659040288303,1.87145286756327,1.50409737833809,0.191288332068843,0.661774257358546,0.231867835620421|short_description=p6@Bcl11a}} | ||
|EntrezGene=14025 | |||
|HGNC= | |||
|MCL_coexpression_id=706 | |||
|UniProt=Q9QYE3,Q5STS7,Q3TP99,Q3US10,Q5STS9,Q5STS8 | |||
|association_with_transcript=-261bp_to_ENSMUST00000000881,NM_001159289,NM_001242934,NM_016707,uc007ifs.2,uc007ift.2,uc007ifu.2,uc007ifv.2_5end | |||
|description=CAGE_peak_6_at_Bcl11a_5end | |||
|id=chr11:23977742..23977794,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.25e-10!23;CL:0000337!1.25e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.03e-10,23;CL:0000337,4.03e-10,23;CL:0002609,1.38e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.50e-16!34;UBERON:0002791!4.99e-14!29;UBERON:0003528!4.99e-14!29;UBERON:0001893!4.99e-14!29;UBERON:0000956!9.47e-12!21;UBERON:0001869!9.47e-12!21;UBERON:0000203!9.47e-12!21;UBERON:0001049!6.50e-10!52;UBERON:0005068!6.50e-10!52;UBERON:0006241!6.50e-10!52;UBERON:0007135!6.50e-10!52;UBERON:0003080!9.34e-10!40;UBERON:0002780!1.46e-09!39;UBERON:0001890!1.46e-09!39;UBERON:0006240!1.46e-09!39;UBERON:0002619!4.77e-09!17;UBERON:0000955!1.00e-08!50;UBERON:0006238!1.00e-08!50;UBERON:0003056!1.67e-08!49;UBERON:0002616!3.49e-08!49;UBERON:0000033!5.01e-08!63;UBERON:0002021!2.73e-07!10;UBERON:0000411!2.73e-07!10;UBERON:0001950!2.73e-07!10;UBERON:0001017!8.02e-07!73;UBERON:0005743!8.02e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.69e-20,34;UBERON:0003528,2.00e-16,29;UBERON:0002791,2.00e-16,29;UBERON:0001893,2.00e-16,29;UBERON:0000956,7.60e-16,21;UBERON:0001869,7.60e-16,21;UBERON:0000203,7.60e-16,21;UBERON:0001049,4.37e-12,52;UBERON:0005068,4.37e-12,52;UBERON:0006241,4.37e-12,52;UBERON:0007135,4.37e-12,52;UBERON:0002619,4.62e-12,17;UBERON:0000073,7.09e-12,54;UBERON:0003080,7.63e-12,40;UBERON:0002780,1.42e-11,39;UBERON:0001890,1.42e-11,39;UBERON:0006240,1.42e-11,39;UBERON:0000955,1.91e-10,47;UBERON:0006238,1.91e-10,47;UBERON:0002616,1.03e-09,46;UBERON:0002021,1.36e-09,10;UBERON:0000411,1.36e-09,10;UBERON:0001950,1.36e-09,10;UBERON:0001017,5.15e-09,73;UBERON:0001016,1.88e-08,75;UBERON:0010371,2.54e-08,73;UBERON:0003056,6.02e-08,49;UBERON:0002346,9.30e-08,64;UBERON:0003075,9.30e-08,64;UBERON:0007284,9.30e-08,64 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,1.66554880907831,4.25198061518635,0.699561878128147,5.36285681109004,7.67840828192137,7.21462408056651,0.595303031057488,1.09220046320974,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0.380046838912748,0,0,0,0,0,0.866554859253824,0.332469290716985,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,4.53013036355888,0,0,0,0,0,6.06949382578793,4.23192783417626,5.07065122804943,0,0,0,0,0,0,0,21.8785081970888,22.1409738863973,21.2428210964896,2.57085885963423,1.98781686856452,17.1487118900936,18.7857123195743,17.4651569455904,1.10115880999389,0.766124028511126,0.768032666281217,3.16527090552465,2.65314166446988,2.08365348222704,0.558365998002762,0.56276261003168,0.61119299110724,4.12480019663135,3.98640706237488,10.0655700745662,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,10.616453229534,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0.289198713839823,2.65383165584962,0.323533699894818,1.98757366614354,1.93950101254089,0,0,0,0.255457055208591,0.958520996047362,1.79970819298022,1.01656181658452,1.3481157546434,5.03250663100489,23.6230181972185,4.17178368461463,5.11430914660661,1.87009240103604,1.78465389374533,0.101839363850316,0.622034853050465,0,0,0.390361328888111,0.459804208866946,0,0.60281927134286,0.340182495756639,0.512454881139399,0.374806898238915,0.517406741478031,1.29340795759705,1.13463648100692,3.69497360744293,4.3839146485515,2.78047249225598,4.52727816478817,2.67516777330327,0.199034266818493,0.702213187313235,0.257347907114715,0,0.414251545071004,0.234526059981096,0,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,7.99101804543684,10.1875566255492,0,0,0.639864751605702,0,0.128867461322093,0.605050573870028,0.22237804384487,0.190225626112559,0,0,1.00534083520108,0.397912944082302,0.58489226135736,0,0.432276099749388,0.796565093017469,0,0,0,0,0.193952487167626,0,0,0,0,0,0,1.50160595144485,1.96558995113203,3.37293168577281,2.23146133527353,1.68824011826692,0,0.575392274901621,0.972811360650212,0.823684239564244,0,0,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,0.162964976442026,0.169745085775188,0,0.502518772325447,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,1.28440471990234,0.937693492737625,0,0,0,0.390438744296638,0,0,0,0,0,0,0,19.921921618152,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0,0,0,0,0,1.15420377059036,3.22928853391811,2.5934557719107,1.90995750405018,1.47726809770555,0,0.556275906031529,4.44264290074417,0,1.48155621895769,1.13021074202815,3.55404992074665,2.74533807847827,2.03974115992626,1.6794174278839,1.65839968565309,0.954670618015114,0.790839983952838,1.42323626988794,0.86404272657441,1.46361807210128,0.655087691238533,0.539457385539283,0.330613822901344,0,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0,0,0,0,1.01362607645082,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0,0.194915761479505,0,0,0.680191150845634,0,0,0,0,0,0,0.428736758158132,0,7.90652579663893,9.20650473014354,4.58316410751517,7.90524638780963,4.7955776383945,5.2877572817279,2.02506750069542,7.20513925158753,4.98456649882625,5.1776031175182,0.31136204275253,3.19219898720825,1.19513524027894,3.40349403895612,2.93458427679175,2.02227859295016,1.11123363900808,2.06035057238894,1.92551525755089,2.02157769411038,1.52087579934144,2.26351609663291,2.43467919421694,1.47257850531199,2.29741875822453,1.90517476513229,2.43357084484197,2.12200142510076,1.64834360321323,2.50238164228475,2.40008476669791,1.77475806159337,2.14592570952589,2.0348498328526,2.25862512996793,1.86152137361688,2.56099162021882,1.8414879800649,1.49384525230448,0,3.08451047122853,1.67457620038458,2.86461730218783,2.78886314134739,3.47231899766054,4.49659040288303,1.87145286756327,1.50409737833809,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p6@Bcl11a | |||
}} |
Revision as of 19:18, 12 September 2013
Short description: | p6@Bcl11a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Bcl11a_5end |
Coexpression cluster: | MCL_coexpression_mm9:706 |
Association with transcript: | -261bp_to_ENSMUST00000000881, NM_001159289, NM_001242934, NM_016707, uc007ifs.2, uc007ift.2, uc007ifu.2, uc007ifv.2_5end |
EntrezGene: | Bcl11a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.03e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.03e-10 | 23 |
neuron of cerebral cortex | 1.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gray matter | 6.69e-20 | 34 |
brain grey matter | 2.00e-16 | 29 |
regional part of telencephalon | 2.00e-16 | 29 |
telencephalon | 2.00e-16 | 29 |
cerebral cortex | 7.60e-16 | 21 |
cerebral hemisphere | 7.60e-16 | 21 |
pallium | 7.60e-16 | 21 |
neural tube | 4.37e-12 | 52 |
neural rod | 4.37e-12 | 52 |
future spinal cord | 4.37e-12 | 52 |
neural keel | 4.37e-12 | 52 |
regional part of cerebral cortex | 4.62e-12 | 17 |
regional part of nervous system | 7.09e-12 | 54 |
anterior neural tube | 7.63e-12 | 40 |
regional part of forebrain | 1.42e-11 | 39 |
forebrain | 1.42e-11 | 39 |
future forebrain | 1.42e-11 | 39 |
brain | 1.91e-10 | 47 |
future brain | 1.91e-10 | 47 |
regional part of brain | 1.03e-09 | 46 |
occipital lobe | 1.36e-09 | 10 |
visual cortex | 1.36e-09 | 10 |
neocortex | 1.36e-09 | 10 |
central nervous system | 5.15e-09 | 73 |
nervous system | 1.88e-08 | 75 |
ecto-epithelium | 2.54e-08 | 73 |
pre-chordal neural plate | 6.02e-08 | 49 |
neurectoderm | 9.30e-08 | 64 |
neural plate | 9.30e-08 | 64 |
presumptive neural plate | 9.30e-08 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.