FFCP PHASE1:Mm9::chr11:57997388..57997399,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=631323|HGNC=|MCL_coexpression_id=2687|UniProt=Q0GUM3|association_with_transcript=43bp_to_ENSMUST00000164282,NM_001135115,uc011xvf.1_5end|description=CAGE_peak_5_at_Gm12250_5end|id=chr11:57997388..57997399,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000815,9.82e-10,1;CL:0000792,9.82e-10,1;CL:0000213,1.73e-09,1;CL:0002078,1.73e-09,1;CL:0000115,1.73e-09,1;CL:0002262,1.73e-09,1;CL:1000398,1.73e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.73e-09,1;UBERON:0001281,1.73e-09,1;UBERON:0000353,1.73e-09,1;UBERON:0003497,1.73e-09,1;UBERON:0003909,1.73e-09,1;UBERON:0003928,1.73e-09,1;UBERON:0003835,1.73e-09,1;UBERON:0003513,1.73e-09,1;UBERON:0001280,1.73e-09,1;UBERON:0004647,1.73e-09,1;UBERON:0002294,1.73e-09,1;UBERON:0001173,1.73e-09,1;UBERON:0004912,1.73e-09,1;UBERON:0005171,1.73e-09,1;UBERON:0000029,5.27e-09,1;UBERON:0001097,5.27e-09,1;UBERON:0003968,5.27e-09,1;UBERON:0001467,5.27e-09,1;UBERON:0000055,3.01e-07,5;UBERON:0007500,3.01e-07,5;UBERON:0001981,3.01e-07,5;UBERON:0002049,3.01e-07,5;UBERON:0007798,3.01e-07,5;UBERON:0004537,3.01e-07,5;UBERON:0006965,3.01e-07,5|phase1_expression=0,0.348975407639361,0,0.60492842261366,0,0,0,4.9066862907799,0.422366166455,0.70219357896598,0,0.159544317990673,0.684802919724823,2.71003247498892,0,0,0,0.157731082679119,0.274228867211478,0.84877930359606,0.255129870453209,0,0.783599367416806,0.319984845586813,0,0.57423196411502,0.86152399231815,0,0.760093677825496,0.504060259519861,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.227178579999552,0,1.44932244350839,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,1.03575153458869,0.148442139064825,0,0,0,0,0,0.125666591329675,0,1.01219549843938,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0,0,1.32167513193519,1.05780226665418,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,1.47802552133284,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.433947175744535,0,1.08781136763742,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.854354403989263,0,0.370389054739423,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p5@Gm12250}} | ||
|EntrezGene=631323 | |||
|HGNC= | |||
|MCL_coexpression_id=2687 | |||
|UniProt=Q0GUM3 | |||
|association_with_transcript=43bp_to_ENSMUST00000164282,NM_001135115,uc011xvf.1_5end | |||
|description=CAGE_peak_5_at_Gm12250_5end | |||
|id=chr11:57997388..57997399,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,9.82e-10,1;CL:0000792,9.82e-10,1;CL:0000213,1.73e-09,1;CL:0002078,1.73e-09,1;CL:0000115,1.73e-09,1;CL:0002262,1.73e-09,1;CL:1000398,1.73e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.73e-09,1;UBERON:0001281,1.73e-09,1;UBERON:0000353,1.73e-09,1;UBERON:0003497,1.73e-09,1;UBERON:0003909,1.73e-09,1;UBERON:0003928,1.73e-09,1;UBERON:0003835,1.73e-09,1;UBERON:0003513,1.73e-09,1;UBERON:0001280,1.73e-09,1;UBERON:0004647,1.73e-09,1;UBERON:0002294,1.73e-09,1;UBERON:0001173,1.73e-09,1;UBERON:0004912,1.73e-09,1;UBERON:0005171,1.73e-09,1;UBERON:0000029,5.27e-09,1;UBERON:0001097,5.27e-09,1;UBERON:0003968,5.27e-09,1;UBERON:0001467,5.27e-09,1;UBERON:0000055,3.01e-07,5;UBERON:0007500,3.01e-07,5;UBERON:0001981,3.01e-07,5;UBERON:0002049,3.01e-07,5;UBERON:0007798,3.01e-07,5;UBERON:0004537,3.01e-07,5;UBERON:0006965,3.01e-07,5 | |||
|phase1_expression=0,0.348975407639361,0,0.60492842261366,0,0,0,4.9066862907799,0.422366166455,0.70219357896598,0,0.159544317990673,0.684802919724823,2.71003247498892,0,0,0,0.157731082679119,0.274228867211478,0.84877930359606,0.255129870453209,0,0.783599367416806,0.319984845586813,0,0.57423196411502,0.86152399231815,0,0.760093677825496,0.504060259519861,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.227178579999552,0,1.44932244350839,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,1.03575153458869,0.148442139064825,0,0,0,0,0,0.125666591329675,0,1.01219549843938,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0,0,1.32167513193519,1.05780226665418,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.38992817423824,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,1.47802552133284,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.433947175744535,0,1.08781136763742,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0.854354403989263,0,0.370389054739423,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0.192423683280659,0,0.226730383615211,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Gm12250 | |||
}} |
Revision as of 20:06, 12 September 2013
Short description: | p5@Gm12250 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gm12250_5end |
Coexpression cluster: | MCL_coexpression_mm9:2687 |
Association with transcript: | 43bp_to_ENSMUST00000164282, NM_001135115, uc011xvf.1_5end |
EntrezGene: | Gm12250 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 9.82e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.82e-10 | 1 |
lining cell | 1.73e-09 | 1 |
meso-epithelial cell | 1.73e-09 | 1 |
endothelial cell | 1.73e-09 | 1 |
endothelial cell of sinusoid | 1.73e-09 | 1 |
endothelial cell of hepatic sinusoid | 1.73e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.73e-09 | 1 |
hepatic sinusoid | 1.73e-09 | 1 |
parenchyma | 1.73e-09 | 1 |
abdomen blood vessel | 1.73e-09 | 1 |
sinusoid | 1.73e-09 | 1 |
digestive system duct | 1.73e-09 | 1 |
abdominal segment blood vessel | 1.73e-09 | 1 |
trunk blood vessel | 1.73e-09 | 1 |
liver parenchyma | 1.73e-09 | 1 |
liver lobule | 1.73e-09 | 1 |
biliary system | 1.73e-09 | 1 |
biliary tree | 1.73e-09 | 1 |
biliary bud | 1.73e-09 | 1 |
hepatic duct | 1.73e-09 | 1 |
lymph node | 5.27e-09 | 1 |
axillary lymph node | 5.27e-09 | 1 |
peripheral lymph node | 5.27e-09 | 1 |
shoulder | 5.27e-09 | 1 |
vessel | 3.01e-07 | 5 |
epithelial tube open at both ends | 3.01e-07 | 5 |
blood vessel | 3.01e-07 | 5 |
vasculature | 3.01e-07 | 5 |
vascular system | 3.01e-07 | 5 |
blood vasculature | 3.01e-07 | 5 |
vascular cord | 3.01e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.