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FFCP PHASE1:Mm9::chr10:59165377..59165391,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=216001|HGNC=|UniProt=Q8VCX5|association_with_transcript=0bp_to_NM_144822,uc007fdv.1,uc007fdw.1,uc007fdx.1,uc007fdy.1_5end|description=CAGE_peak_3_at_Cbara1_5end|id=chr10:59165377..59165391,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!8.07e-11!63;UBERON:0003056!1.41e-10!49;UBERON:0001049!2.07e-10!52;UBERON:0005068!2.07e-10!52;UBERON:0006241!2.07e-10!52;UBERON:0007135!2.07e-10!52;UBERON:0000955!7.86e-10!50;UBERON:0006238!7.86e-10!50;UBERON:0001017!1.01e-09!73;UBERON:0005743!1.01e-09!73;UBERON:0002616!2.23e-09!49;UBERON:0000073!2.79e-09!75;UBERON:0001016!2.79e-09!75;UBERON:0003080!4.37e-09!40;UBERON:0002780!4.43e-09!39;UBERON:0001890!4.43e-09!39;UBERON:0006240!4.43e-09!39;UBERON:0002346!6.83e-09!71;UBERON:0003075!6.83e-09!71;UBERON:0007284!6.83e-09!71;UBERON:0002020!9.41e-09!34;UBERON:0004121!1.29e-08!102;UBERON:0000924!1.29e-08!102;UBERON:0006601!1.29e-08!102;UBERON:0002791!2.81e-07!29;UBERON:0003528!2.81e-07!29;UBERON:0001893!2.81e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.21e-11,54;UBERON:0010371,1.13e-10,73;UBERON:0003056,1.32e-10,49;UBERON:0002346,1.48e-10,64;UBERON:0003075,1.48e-10,64;UBERON:0007284,1.48e-10,64;UBERON:0001049,1.91e-10,52;UBERON:0005068,1.91e-10,52;UBERON:0006241,1.91e-10,52;UBERON:0007135,1.91e-10,52;UBERON:0004121,7.22e-10,95;UBERON:0000924,7.22e-10,95;UBERON:0006601,7.22e-10,95;UBERON:0000955,1.27e-09,47;UBERON:0006238,1.27e-09,47;UBERON:0001017,1.38e-09,73;UBERON:0002616,3.62e-09,46;UBERON:0001016,3.80e-09,75;UBERON:0003080,4.07e-09,40;UBERON:0002780,4.14e-09,39;UBERON:0001890,4.14e-09,39;UBERON:0006240,4.14e-09,39;UBERON:0002020,8.81e-09,34;UBERON:0003528,2.67e-07,29;UBERON:0002791,2.67e-07,29;UBERON:0001893,2.67e-07,29|phase1_expression=3.36312578920067,13.9590163055744,9.55498402718026,5.74682001482977,10.0179145989269,2.85394762250213,4.67225281191051,1.42035655785734,2.81577444303333,3.7450324211519,1.71217968225505,0.797721589953364,0.513602189793617,0.611942816932982,0.666219523631325,1.41732687172878,0.699561878128147,1.41957974411207,0.548457734422955,0.42438965179803,1.53077922271926,0.397163804803541,0.261199789138935,5.91971964335605,5.73523202667925,6.31655160526522,7.75371593086335,6.67960821326256,4.56056206695297,2.77233142735924,3.76941868114018,0,0.61506478758457,0,1.44425809875637,0.332469290716985,0.816677425049476,3.76678467663217,1.5626706890476,1.57057123192139,2.94115744015507,1.36609096991689,2.42755176515577,7.42791226055906,6.18399280439039,6.9747765821439,1.56478268869608,10.9012578190223,11.643367684927,13.6100929351998,4.05960622713551,8.62515386189829,1.67782606057736,0.725362142011344,1.00828139742739,4.63066984864705,5.73066879877513,2.57836046138721,1.82084814773638,3.1739458756322,3.1691570175309,3.72728985276045,2.66788438833342,1.7997994345628,1.97773272513395,0.7104801149461,3.89480143673926,7.30014780110954,1.65903379693564,2.56511282830212,1.89292465216244,2.85650984403804,4.19650227808066,1.95985278743926,1.91690942036473,1.83843757322004,3.30347642998166,3.06449611404451,2.4577045320999,2.50583946687368,4.20843160571084,3.12548022334056,2.51264699101243,3.37657566019008,2.13917546887534,4.41942878210502,4.6982654663704,4.65998614563251,2.19605960666234,1.28471652181535,0.579728977403356,0.860423876981386,0,1.07940638327563,0,0.448026887097336,2.24711072210803,7.32850387085648,4.41636207824877,6.00677276667578,4.22530259330042,1.28326477414318,5.09610479413291,0,2.38140145112336,1.52015919285059,1.51657333504435,1.48439043634778,0.776813650941515,1.03909497345377,1.56136794089522,2.74018930480927,2.30615497256059,1.3565037649736,1.76383060703557,1.13099932196708,1.48316980640624,1.15679485535929,0.884610551949874,6.30890714794896,2.65009822152472,1.45462575940567,1.86391761218122,1.75668478206928,3.56059401582874,2.81002760729451,1.55759661857696,0.599902730993408,1.39777249780371,2.69623150928681,6.8625090422794,5.78010019719176,6.43149984711423,8.43861009190091,4.1557608911912,5.67844420737152,3.46253837091075,1.49288364732112,1.0108910337347,0.631325567659422,3.12289063110489,2.29902104433473,3.78130472591233,4.21973489940002,4.49040894398764,5.89323113310309,4.8724896771059,4.9153640440413,0.862271971731369,3.9712276835242,4.57472922826267,5.04150184583422,4.72680323683516,3.1342694986995,2.46938563689532,2.38841120182192,1.40442637462647,1.02939162845886,1.42081749697796,2.27838349789052,2.11073453982987,1.98068267607116,1.65721314909647,1.96764231747404,1.3884040159864,1.39520366850245,2.41446061259657,0.817357396570186,1.31647879930784,0.820837320395476,0.810688095458557,1.16959989940266,1.09775057645525,1.07365135008297,5.67782861123144,4.11618449517138,10.5734010554815,2.11560453330835,1.91959425481711,1.85789337488351,2.70621668776396,0.605050573870028,0.889512175379481,1.52180500890047,4.74529061544512,1.4822905925161,1.00534083520108,1.1937388322469,1.36474860983384,3.595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|EntrezGene=216001
|HGNC=
|UniProt=Q8VCX5
|association_with_transcript=0bp_to_NM_144822,uc007fdv.1,uc007fdw.1,uc007fdx.1,uc007fdy.1_5end
|description=CAGE_peak_3_at_Cbara1_5end
|id=chr10:59165377..59165391,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!8.07e-11!63;UBERON:0003056!1.41e-10!49;UBERON:0001049!2.07e-10!52;UBERON:0005068!2.07e-10!52;UBERON:0006241!2.07e-10!52;UBERON:0007135!2.07e-10!52;UBERON:0000955!7.86e-10!50;UBERON:0006238!7.86e-10!50;UBERON:0001017!1.01e-09!73;UBERON:0005743!1.01e-09!73;UBERON:0002616!2.23e-09!49;UBERON:0000073!2.79e-09!75;UBERON:0001016!2.79e-09!75;UBERON:0003080!4.37e-09!40;UBERON:0002780!4.43e-09!39;UBERON:0001890!4.43e-09!39;UBERON:0006240!4.43e-09!39;UBERON:0002346!6.83e-09!71;UBERON:0003075!6.83e-09!71;UBERON:0007284!6.83e-09!71;UBERON:0002020!9.41e-09!34;UBERON:0004121!1.29e-08!102;UBERON:0000924!1.29e-08!102;UBERON:0006601!1.29e-08!102;UBERON:0002791!2.81e-07!29;UBERON:0003528!2.81e-07!29;UBERON:0001893!2.81e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.21e-11,54;UBERON:0010371,1.13e-10,73;UBERON:0003056,1.32e-10,49;UBERON:0002346,1.48e-10,64;UBERON:0003075,1.48e-10,64;UBERON:0007284,1.48e-10,64;UBERON:0001049,1.91e-10,52;UBERON:0005068,1.91e-10,52;UBERON:0006241,1.91e-10,52;UBERON:0007135,1.91e-10,52;UBERON:0004121,7.22e-10,95;UBERON:0000924,7.22e-10,95;UBERON:0006601,7.22e-10,95;UBERON:0000955,1.27e-09,47;UBERON:0006238,1.27e-09,47;UBERON:0001017,1.38e-09,73;UBERON:0002616,3.62e-09,46;UBERON:0001016,3.80e-09,75;UBERON:0003080,4.07e-09,40;UBERON:0002780,4.14e-09,39;UBERON:0001890,4.14e-09,39;UBERON:0006240,4.14e-09,39;UBERON:0002020,8.81e-09,34;UBERON:0003528,2.67e-07,29;UBERON:0002791,2.67e-07,29;UBERON:0001893,2.67e-07,29
|phase1_expression=3.36312578920067,13.9590163055744,9.55498402718026,5.74682001482977,10.0179145989269,2.85394762250213,4.67225281191051,1.42035655785734,2.81577444303333,3.7450324211519,1.71217968225505,0.797721589953364,0.513602189793617,0.611942816932982,0.666219523631325,1.41732687172878,0.699561878128147,1.41957974411207,0.548457734422955,0.42438965179803,1.53077922271926,0.397163804803541,0.261199789138935,5.91971964335605,5.73523202667925,6.31655160526522,7.75371593086335,6.67960821326256,4.56056206695297,2.77233142735924,3.76941868114018,0,0.61506478758457,0,1.44425809875637,0.332469290716985,0.816677425049476,3.76678467663217,1.5626706890476,1.57057123192139,2.94115744015507,1.36609096991689,2.42755176515577,7.42791226055906,6.18399280439039,6.9747765821439,1.56478268869608,10.9012578190223,11.643367684927,13.6100929351998,4.05960622713551,8.62515386189829,1.67782606057736,0.725362142011344,1.00828139742739,4.63066984864705,5.73066879877513,2.57836046138721,1.82084814773638,3.1739458756322,3.1691570175309,3.72728985276045,2.66788438833342,1.7997994345628,1.97773272513395,0.7104801149461,3.89480143673926,7.30014780110954,1.65903379693564,2.56511282830212,1.89292465216244,2.85650984403804,4.19650227808066,1.95985278743926,1.91690942036473,1.83843757322004,3.30347642998166,3.06449611404451,2.4577045320999,2.50583946687368,4.20843160571084,3.12548022334056,2.51264699101243,3.37657566019008,2.13917546887534,4.41942878210502,4.6982654663704,4.65998614563251,2.19605960666234,1.28471652181535,0.579728977403356,0.860423876981386,0,1.07940638327563,0,0.448026887097336,2.24711072210803,7.32850387085648,4.41636207824877,6.00677276667578,4.22530259330042,1.28326477414318,5.09610479413291,0,2.38140145112336,1.52015919285059,1.51657333504435,1.48439043634778,0.776813650941515,1.03909497345377,1.56136794089522,2.74018930480927,2.30615497256059,1.3565037649736,1.76383060703557,1.13099932196708,1.48316980640624,1.15679485535929,0.884610551949874,6.30890714794896,2.65009822152472,1.45462575940567,1.86391761218122,1.75668478206928,3.56059401582874,2.81002760729451,1.55759661857696,0.599902730993408,1.39777249780371,2.69623150928681,6.8625090422794,5.78010019719176,6.43149984711423,8.43861009190091,4.1557608911912,5.67844420737152,3.46253837091075,1.49288364732112,1.0108910337347,0.631325567659422,3.12289063110489,2.29902104433473,3.78130472591233,4.21973489940002,4.49040894398764,5.89323113310309,4.8724896771059,4.9153640440413,0.862271971731369,3.9712276835242,4.57472922826267,5.04150184583422,4.72680323683516,3.1342694986995,2.46938563689532,2.38841120182192,1.40442637462647,1.02939162845886,1.42081749697796,2.27838349789052,2.11073453982987,1.98068267607116,1.65721314909647,1.96764231747404,1.3884040159864,1.39520366850245,2.41446061259657,0.817357396570186,1.31647879930784,0.820837320395476,0.810688095458557,1.16959989940266,1.09775057645525,1.07365135008297,5.67782861123144,4.11618449517138,10.5734010554815,2.11560453330835,1.91959425481711,1.85789337488351,2.70621668776396,0.605050573870028,0.889512175379481,1.52180500890047,4.74529061544512,1.4822905925161,1.00534083520108,1.1937388322469,1.36474860983384,3.59527763461689,2.59365659849633,3.98282546508734,1.13800740571849,2.28497025219458,1.1270773567308,2.8511185898344,1.93952487167626,1.96380295692892,2.15004226222475,1.03327103585722,1.41298855057237,0.493588655687202,0,0.83422552858047,1.17935397067922,0.449724224769707,1.82574109249653,2.41177159752417,1.78238096246994,1.15078454980324,1.29708181420028,1.09824565275233,4.31304619582064,1.86070473834252,1.87222603868736,1.51547326768267,0.896987067609561,1.4473305640901,3.69506380333209,1.32643988239339,1.95557971730431,2.20668611507745,1.17345124144251,2.1775813467436,1.42826184531608,1.56106918286239,1.89162172927429,2.43611158613652,3.6674596791222,4.26044618260919,4.31712454664739,3.32692834737477,0,1.08781136763742,0.491764273019036,0.827810238914197,2.0871576698413,2.93029216480508,3.27869890753351,0.504941854408746,0.94652465824877,2.34263246577983,0.861693590931196,1.19484398976276,2.22798674082394,1.13230612315533,2.83367491172426,1.16902343164525,0.790575555893047,5.78378369559253,1.84522110770749,3.5613120733451,2.60619134965722,2.8044920905331,1.32745138339963,1.69946445308487,1.51161778482376,0.565815239267694,0.590603785761546,0.922305443831782,1.03371317267288,1.45413491791002,1.42598951353889,0.316036757935816,1.05418608574999,0,3.06395645178409,2.70091641046965,2.58717367565509,3.21505552547388,4.25616560741457,2.85390108163313,4.77192159746151,3.04464949114599,1.40803024838226,2.54198485036584,1.10264199027481,7.4198813823666,2.58343082713449,2.53314284698255,2.626191568069,4.43180429311665,2.04036585640896,1.8542530201051,1.36696704638282,1.44470807574256,1.11116716421827,2.0720530270516,2.05041341581538,1.37266903923914,0.849892149969277,1.25956307091292,1.38199973804424,5.72802370809068,1.73984796469624,2.03319467126849,1.83609079397062,3.13632444021703,3.71216358368502,2.83215127408124,2.64491058321075,1.83229159388821,4.53652406521275,0,1.12738587736838,3.43888055901151,4.63283773279873,3.50012139019286,3.7456348808542,2.70329800785245,2.22978753426933,2.604087696879,1.67774951081137,0.966336483304024,0.864090018773596,2.21207784439725,1.82452693761148,0.924398614483445,0.909445760844565,1.43221356533985,1.19208812868759,1.32214994471966,1.77227432609493,2.01932899896295,0.914481679859998,1.41156659191577,1.16949456887703,1.15454209968395,1.63627663054197,1.58711268530648,0.443971906748129,0,0.503653849092235,5.02292944483695,1.31377732815827,2.93042598827624,2.57242054894879,0.501572104035363,9.03602948187307,7.36520378411483,6.30185064783336,8.76451229952807,8.22099023724771,4.5323633843382,4.05013500139084,4.05289082901798,4.53142408984205,3.10656187051092,1.97195960409936,4.38927360741134,3.24393850932855,3.64660075602441,1.04806581313991,2.5738091183002,2.22246727801615,1.64828045791115,0.64183841918363,1.26348605881899,3.04175159868288,1.88626341386076,4.12022632867483,2.94515701062399,3.27382173046996,0.952587382566147,2.43357084484197,2.50781986602817,3.29668720642645,2.20798380201596,5.82877729055206,1.95223386775271,3.81497903915713,3.0522747492789,3.57615645578256,3.29996970777538,3.47563148458268,4.73525480588117,3.66671107383827,1.68342681497322,3.32178050747688,3.25064791839359,2.86461730218783,4.02835787083512,2.70069255373598,2.99772693525535,2.33931608445408,3.43793686477277,5.54736162999646,3.30887128679273,4.40548887678801
|short_description=p3@Cbara1
}}

Revision as of 16:58, 12 September 2013

Short description:p3@Cbara1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cbara1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_144822, uc007fdv.1, uc007fdw.1, uc007fdx.1, uc007fdy.1_5end
EntrezGene:Cbara1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Cbara1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I26.68
Ileum epithelium, pool1.CNhs13199.10252-104B94.56
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D92.20
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F56.31
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C63.12
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D44.22
eyeball, neonate N00.CNhs11207.633-15C64.49
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G14.12
intestinal mucosa, adult.CNhs10506.860-29I310.57
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G71.96
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A44.26
lung, neonate N25.CNhs11119.1359-25C74.32
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B94.26
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C37.42
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.53
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I14.54
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I53.75
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C42.02
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.21e-1154
ecto-epithelium1.13e-1073
pre-chordal neural plate1.32e-1049
neurectoderm1.48e-1064
neural plate1.48e-1064
presumptive neural plate1.48e-1064
neural tube1.91e-1052
neural rod1.91e-1052
future spinal cord1.91e-1052
neural keel1.91e-1052
ectoderm-derived structure7.22e-1095
ectoderm7.22e-1095
presumptive ectoderm7.22e-1095
brain1.27e-0947
future brain1.27e-0947
central nervous system1.38e-0973
regional part of brain3.62e-0946
nervous system3.80e-0975
anterior neural tube4.07e-0940
regional part of forebrain4.14e-0939
forebrain4.14e-0939
future forebrain4.14e-0939
gray matter8.81e-0934
brain grey matter2.67e-0729
regional part of telencephalon2.67e-0729
telencephalon2.67e-0729







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