FFCP PHASE1:Mm9::chr3:66023864..66023873,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19288|HGNC=|MCL_coexpression_id=760|UniProt=P48759|association_with_transcript=55bp_to_ENSMUST00000029421,NM_008987,uc008pla.1_5end|description=CAGE_peak_3_at_Ptx3_5end|id=chr3:66023864..66023873,+|ontology_enrichment_celltype=CL:0002453!3.41e-07!8;CL:0000333!3.84e-07!10;CL:0000095!3.84e-07!10;CL:0000243!3.84e-07!10;CL:0000123!3.84e-07!10;CL:0000125!3.84e-07!10;CL:0000030!3.84e-07!10;CL:0000339!3.84e-07!10|ontology_enrichment_celltype_v019_2=CL:0002453,1.99e-18,8;CL:0000128,2.24e-18,6;CL:0000126,2.24e-18,6;CL:0000127,2.24e-18,6;CL:0000333,1.46e-14,10;CL:0000095,1.46e-14,10;CL:0000243,1.46e-14,10;CL:0000123,1.46e-14,10;CL:0000125,1.46e-14,10;CL:0000030,1.46e-14,10;CL:0000339,1.46e-14,10;CL:0002319,6.51e-13,43;CL:0000221,1.50e-12,44;CL:0000133,1.50e-12,44;CL:0002321,3.17e-12,70;CL:0002293,3.39e-11,3;CL:0000120,2.88e-09,3;CL:0002603,1.95e-07,2;CL:0000708,2.09e-07,2;CL:0002605,2.42e-07,2;CL:0002604,2.42e-07,2;CL:0000117,3.97e-07,23;CL:0000337,3.97e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003210,2.09e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.405507724878058,0,3.9119567217402,1.30815093828268,1.75748946187577,1.55543919259427,1.1198913730029,1.43752564364972,0,0,0,1.28629718017973,0.85960031981627,0,1.21389876515759,1.05798195854407,1.26766280701236,1.69422266034566,1.77858959222228,0,0,0,1.49800055259202,0.384218305321555,0.725827286159344,1.89008313664367,1.26194976810829,0,0.220868540951614,0.857435594504678,1.82106394934649,0,0,0,0,0.527545150920775,1.09785172322892,1.04182674111352,0,0,0,0,0,0.186399445825301,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,3.40860645156115,3.37721805983729,3.5333957451034,0.14084341977668,29.5150898052931,5.09610479413291,7.11066703153331,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.323533699894818,0.662524555381181,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0.459804208866946,0,0.30140963567143,0.204109497453984,0,0.0937017245597288,0,0,0.756424320671277,0.879755620819744,1.31517439456545,0.556094498451196,0,0.61734640922383,0.398068533636986,0,0,0,0,0.469052119962192,0.540186184383045,0.23674473558521,0.590292695242212,0,0.697601834251224,0.268273401399619,0,0.329119699826961,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0,0.514523061896422,0,0,0,0.696710015581316,0.38660238396628,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0.456994050438915,1.1270773567308,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.476087281772027,0.585400943573396,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,8.36068221421045,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0,0,0.484393280087717,0.241251699712623,0.358117032009409,0,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0.276399947608848,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,1.19707462020309,1.19513524027894,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.760437899670719,0.943131706930381,0.0936415074698824,0.192075457214608,0.34461281373368,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.771626443924566,0,0.467863216890817,0.644613162144895,0.191288332068843,0.882365676478062,0.231867835620421|short_description=p3@Ptx3}} | ||
|EntrezGene=19288 | |||
|HGNC= | |||
|MCL_coexpression_id=760 | |||
|UniProt=P48759 | |||
|association_with_transcript=55bp_to_ENSMUST00000029421,NM_008987,uc008pla.1_5end | |||
|description=CAGE_peak_3_at_Ptx3_5end | |||
|id=chr3:66023864..66023873,+ | |||
|ontology_enrichment_celltype=CL:0002453!3.41e-07!8;CL:0000333!3.84e-07!10;CL:0000095!3.84e-07!10;CL:0000243!3.84e-07!10;CL:0000123!3.84e-07!10;CL:0000125!3.84e-07!10;CL:0000030!3.84e-07!10;CL:0000339!3.84e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.99e-18,8;CL:0000128,2.24e-18,6;CL:0000126,2.24e-18,6;CL:0000127,2.24e-18,6;CL:0000333,1.46e-14,10;CL:0000095,1.46e-14,10;CL:0000243,1.46e-14,10;CL:0000123,1.46e-14,10;CL:0000125,1.46e-14,10;CL:0000030,1.46e-14,10;CL:0000339,1.46e-14,10;CL:0002319,6.51e-13,43;CL:0000221,1.50e-12,44;CL:0000133,1.50e-12,44;CL:0002321,3.17e-12,70;CL:0002293,3.39e-11,3;CL:0000120,2.88e-09,3;CL:0002603,1.95e-07,2;CL:0000708,2.09e-07,2;CL:0002605,2.42e-07,2;CL:0002604,2.42e-07,2;CL:0000117,3.97e-07,23;CL:0000337,3.97e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,2.09e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.405507724878058,0,3.9119567217402,1.30815093828268,1.75748946187577,1.55543919259427,1.1198913730029,1.43752564364972,0,0,0,1.28629718017973,0.85960031981627,0,1.21389876515759,1.05798195854407,1.26766280701236,1.69422266034566,1.77858959222228,0,0,0,1.49800055259202,0.384218305321555,0.725827286159344,1.89008313664367,1.26194976810829,0,0.220868540951614,0.857435594504678,1.82106394934649,0,0,0,0,0.527545150920775,1.09785172322892,1.04182674111352,0,0,0,0,0,0.186399445825301,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,3.40860645156115,3.37721805983729,3.5333957451034,0.14084341977668,29.5150898052931,5.09610479413291,7.11066703153331,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.323533699894818,0.662524555381181,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0,0.203678727700633,0.124406970610093,0,0,0.390361328888111,0.459804208866946,0,0.30140963567143,0.204109497453984,0,0.0937017245597288,0,0,0.756424320671277,0.879755620819744,1.31517439456545,0.556094498451196,0,0.61734640922383,0.398068533636986,0,0,0,0,0.469052119962192,0.540186184383045,0.23674473558521,0.590292695242212,0,0.697601834251224,0.268273401399619,0,0.329119699826961,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0,0.514523061896422,0,0,0,0.696710015581316,0.38660238396628,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0,0.456994050438915,1.1270773567308,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.476087281772027,0.585400943573396,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0,8.36068221421045,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0.23467170806371,0,0,0,0.484393280087717,0.241251699712623,0.358117032009409,0,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0.276399947608848,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,1.19707462020309,1.19513524027894,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.760437899670719,0.943131706930381,0.0936415074698824,0.192075457214608,0.34461281373368,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0.771626443924566,0,0.467863216890817,0.644613162144895,0.191288332068843,0.882365676478062,0.231867835620421 | |||
|short_description=p3@Ptx3 | |||
}} |
Revision as of 02:26, 14 September 2013
Short description: | p3@Ptx3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ptx3_5end |
Coexpression cluster: | MCL_coexpression_mm9:760 |
Association with transcript: | 55bp_to_ENSMUST00000029421, NM_008987, uc008pla.1_5end |
EntrezGene: | Ptx3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.99e-18 | 8 |
oligodendrocyte | 2.24e-18 | 6 |
macroglial cell | 2.24e-18 | 6 |
astrocyte | 2.24e-18 | 6 |
migratory neural crest cell | 1.46e-14 | 10 |
neuron associated cell | 1.46e-14 | 10 |
glial cell (sensu Vertebrata) | 1.46e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 1.46e-14 | 10 |
glial cell | 1.46e-14 | 10 |
glioblast | 1.46e-14 | 10 |
glioblast (sensu Vertebrata) | 1.46e-14 | 10 |
neural cell | 6.51e-13 | 43 |
ectodermal cell | 1.50e-12 | 44 |
neurectodermal cell | 1.50e-12 | 44 |
embryonic cell | 3.17e-12 | 70 |
epithelial cell of thymus | 3.39e-11 | 3 |
granule cell | 2.88e-09 | 3 |
astrocyte of the cerebellum | 1.95e-07 | 2 |
leptomeningeal cell | 2.09e-07 | 2 |
astrocyte of the cerebral cortex | 2.42e-07 | 2 |
astrocyte of the hippocampus | 2.42e-07 | 2 |
CNS neuron (sensu Vertebrata) | 3.97e-07 | 23 |
neuroblast (sensu Vertebrata) | 3.97e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 2.09e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.