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FFCP PHASE1:Mm9::chr1:172105090..172105132,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=107652|HGNC=|MCL_coexpression_id=60|UniProt=Q91YN5|association_with_transcript=-2bp_to_ENSMUST00000111350_5end|description=CAGE_peak_4_at_Uap1_5end|id=chr1:172105090..172105132,-|ontology_enrichment_celltype=CL:0000117!1.34e-10!23;CL:0000337!1.34e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.74e-11,23;CL:0000337,9.74e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.33e-14!49;UBERON:0000153!8.27e-14!94;UBERON:0000033!1.54e-13!63;UBERON:0002020!4.02e-13!34;UBERON:0001049!4.04e-13!52;UBERON:0005068!4.04e-13!52;UBERON:0006241!4.04e-13!52;UBERON:0007135!4.04e-13!52;UBERON:0003080!4.21e-13!40;UBERON:0002780!7.35e-13!39;UBERON:0001890!7.35e-13!39;UBERON:0006240!7.35e-13!39;UBERON:0000955!1.57e-12!50;UBERON:0006238!1.57e-12!50;UBERON:0007811!2.77e-12!86;UBERON:0002616!3.24e-12!49;UBERON:0002791!5.07e-11!29;UBERON:0003528!5.07e-11!29;UBERON:0001893!5.07e-11!29;UBERON:0002346!5.09e-11!71;UBERON:0003075!5.09e-11!71;UBERON:0007284!5.09e-11!71;UBERON:0001017!4.41e-09!73;UBERON:0005743!4.41e-09!73;UBERON:0000073!1.98e-08!75;UBERON:0001016!1.98e-08!75;UBERON:0000956!3.79e-08!21;UBERON:0001869!3.79e-08!21;UBERON:0000203!3.79e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.90e-14,54;UBERON:0003056,2.52e-14,49;UBERON:0001049,3.13e-13,52;UBERON:0005068,3.13e-13,52;UBERON:0006241,3.13e-13,52;UBERON:0007135,3.13e-13,52;UBERON:0002020,4.81e-13,34;UBERON:0003080,4.84e-13,40;UBERON:0002780,8.53e-13,39;UBERON:0001890,8.53e-13,39;UBERON:0006240,8.53e-13,39;UBERON:0002346,9.93e-13,64;UBERON:0003075,9.93e-13,64;UBERON:0007284,9.93e-13,64;UBERON:0000955,3.87e-11,47;UBERON:0006238,3.87e-11,47;UBERON:0003528,6.44e-11,29;UBERON:0002791,6.44e-11,29;UBERON:0001893,6.44e-11,29;UBERON:0002616,7.90e-11,46;UBERON:0010371,5.27e-10,73;UBERON:0001017,1.81e-09,73;UBERON:0001016,1.17e-08,75;UBERON:0010314,2.02e-08,92;UBERON:0000956,5.24e-08,21;UBERON:0001869,5.24e-08,21;UBERON:0000203,5.24e-08,21;UBERON:0004121,1.18e-07,95;UBERON:0000924,1.18e-07,95;UBERON:0006601,1.18e-07,95|phase1_expression=2.5623815536767,3.14077866875425,2.27499619694768,0.30246421130683,1.00179145989269,2.68606835059024,2.56973904655078,2.45334314538995,3.37892933164,4.44722600011788,1.36974374580404,1.43589886191606,1.54080656938085,2.71003247498892,1.99865857089398,2.42970320867791,2.09868563438444,0.946386496074713,0.959801035240171,1.69755860719212,2.72138528483423,1.09220046320974,3.39559725880616,1.27993938234725,0.91763712426868,3.44539178469012,1.29228598847722,1.29282739611533,0.950117097281869,1.26015064879965,1.33038306393183,0.635030673459631,1.23012957516914,0,0.288851619751275,1.66234645358492,1.22501613757421,1.67412652294763,0,1.0470474879476,1.17646297606203,1.36609096991689,2.91306211818692,0.881277725829041,1.31790010585369,0.917733760808408,0,0.65407546914134,0.659058548203415,0.972149495371417,0.55994568650145,1.43752564364972,2.01339127269284,5.07753499407941,2.68875039313971,0.514518872071894,1.71920063963254,1.03134418455488,5.46254444320914,2.64495489636016,3.80298842103708,1.0165335962074,0,0.449949858640699,0,0,0,0,3.00699875694585,4.05017814995072,2.94454945891935,3.14216082844184,5.30084498283872,5.38959516545798,4.2172007248024,8.27296907949019,5.50579404996943,3.57524546638526,3.99376986466233,4.61602007055678,5.39777097254217,4.68822033501084,1.67509799400829,2.8138130501584,2.29197371665215,2.35702868378934,4.8406371471695,4.28718725398191,1.13589289999776,0.982430281388212,0.579728977403356,0.860423876981386,0,0,0,0.448026887097336,0.842666520790511,0.852151612890289,0,2.12003744706204,1.69012103732017,1.28326477414318,0,0,2.59789249213457,3.54703811665138,3.0331466700887,0.91347103775248,1.29468941823586,1.03909497345377,2.4287945747259,1.52232739156071,1.61430848079241,1.3565037649736,2.11659672844269,0.502666365318702,1.23597483867187,0.86759614151947,0.884610551949874,2.42650274921114,1.10420759230197,1.93950101254089,1.86391761218122,1.46390398505774,1.04723353406728,1.02182822083437,2.63593273913025,1.19980546198682,2.03312363316904,2.69623150928681,4.57500602818627,9.1727677042391,4.86708096538374,4.60287823194595,3.94797284663164,3.40706652442291,3.97173519016234,1.11966273549084,2.52722758433675,1.47309299120532,2.21204753036596,3.90833577536904,2.88099407688559,2.71268672104287,2.31324097114515,1.92170580427275,3.18585863503078,2.58703370739016,4.095791865724,3.21480336285293,2.46331573829528,2.41115305670332,3.89266148915837,1.39300866608867,3.70407845534298,3.78165106955137,1.40442637462647,2.05878325691772,3.9782889915383,2.69263504296152,2.81431271977315,1.80062061461015,1.42046841351126,1.77087808572663,2.00547246753592,0.697601834251224,1.60964040839772,0.817357396570186,1.6455984991348,1.31333971263276,0.891756905004413,0.584799949701329,2.63460138349261,1.61047702512446,2.73376933133365,4.73361216944708,1.32167513193519,0.793351699990633,2.55945900642281,2.78684006232526,1.54640953586512,0.605050573870028,0.667134131534611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|EntrezGene=107652
|HGNC=
|MCL_coexpression_id=60
|UniProt=Q91YN5
|association_with_transcript=-2bp_to_ENSMUST00000111350_5end
|description=CAGE_peak_4_at_Uap1_5end
|id=chr1:172105090..172105132,-
|ontology_enrichment_celltype=CL:0000117!1.34e-10!23;CL:0000337!1.34e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.74e-11,23;CL:0000337,9.74e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!2.33e-14!49;UBERON:0000153!8.27e-14!94;UBERON:0000033!1.54e-13!63;UBERON:0002020!4.02e-13!34;UBERON:0001049!4.04e-13!52;UBERON:0005068!4.04e-13!52;UBERON:0006241!4.04e-13!52;UBERON:0007135!4.04e-13!52;UBERON:0003080!4.21e-13!40;UBERON:0002780!7.35e-13!39;UBERON:0001890!7.35e-13!39;UBERON:0006240!7.35e-13!39;UBERON:0000955!1.57e-12!50;UBERON:0006238!1.57e-12!50;UBERON:0007811!2.77e-12!86;UBERON:0002616!3.24e-12!49;UBERON:0002791!5.07e-11!29;UBERON:0003528!5.07e-11!29;UBERON:0001893!5.07e-11!29;UBERON:0002346!5.09e-11!71;UBERON:0003075!5.09e-11!71;UBERON:0007284!5.09e-11!71;UBERON:0001017!4.41e-09!73;UBERON:0005743!4.41e-09!73;UBERON:0000073!1.98e-08!75;UBERON:0001016!1.98e-08!75;UBERON:0000956!3.79e-08!21;UBERON:0001869!3.79e-08!21;UBERON:0000203!3.79e-08!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.90e-14,54;UBERON:0003056,2.52e-14,49;UBERON:0001049,3.13e-13,52;UBERON:0005068,3.13e-13,52;UBERON:0006241,3.13e-13,52;UBERON:0007135,3.13e-13,52;UBERON:0002020,4.81e-13,34;UBERON:0003080,4.84e-13,40;UBERON:0002780,8.53e-13,39;UBERON:0001890,8.53e-13,39;UBERON:0006240,8.53e-13,39;UBERON:0002346,9.93e-13,64;UBERON:0003075,9.93e-13,64;UBERON:0007284,9.93e-13,64;UBERON:0000955,3.87e-11,47;UBERON:0006238,3.87e-11,47;UBERON:0003528,6.44e-11,29;UBERON:0002791,6.44e-11,29;UBERON:0001893,6.44e-11,29;UBERON:0002616,7.90e-11,46;UBERON:0010371,5.27e-10,73;UBERON:0001017,1.81e-09,73;UBERON:0001016,1.17e-08,75;UBERON:0010314,2.02e-08,92;UBERON:0000956,5.24e-08,21;UBERON:0001869,5.24e-08,21;UBERON:0000203,5.24e-08,21;UBERON:0004121,1.18e-07,95;UBERON:0000924,1.18e-07,95;UBERON:0006601,1.18e-07,95
|phase1_expression=2.5623815536767,3.14077866875425,2.27499619694768,0.30246421130683,1.00179145989269,2.68606835059024,2.56973904655078,2.45334314538995,3.37892933164,4.44722600011788,1.36974374580404,1.43589886191606,1.54080656938085,2.71003247498892,1.99865857089398,2.42970320867791,2.09868563438444,0.946386496074713,0.959801035240171,1.69755860719212,2.72138528483423,1.09220046320974,3.39559725880616,1.27993938234725,0.91763712426868,3.44539178469012,1.29228598847722,1.29282739611533,0.950117097281869,1.26015064879965,1.33038306393183,0.635030673459631,1.23012957516914,0,0.288851619751275,1.66234645358492,1.22501613757421,1.67412652294763,0,1.0470474879476,1.17646297606203,1.36609096991689,2.91306211818692,0.881277725829041,1.31790010585369,0.917733760808408,0,0.65407546914134,0.659058548203415,0.972149495371417,0.55994568650145,1.43752564364972,2.01339127269284,5.07753499407941,2.68875039313971,0.514518872071894,1.71920063963254,1.03134418455488,5.46254444320914,2.64495489636016,3.80298842103708,1.0165335962074,0,0.449949858640699,0,0,0,0,3.00699875694585,4.05017814995072,2.94454945891935,3.14216082844184,5.30084498283872,5.38959516545798,4.2172007248024,8.27296907949019,5.50579404996943,3.57524546638526,3.99376986466233,4.61602007055678,5.39777097254217,4.68822033501084,1.67509799400829,2.8138130501584,2.29197371665215,2.35702868378934,4.8406371471695,4.28718725398191,1.13589289999776,0.982430281388212,0.579728977403356,0.860423876981386,0,0,0,0.448026887097336,0.842666520790511,0.852151612890289,0,2.12003744706204,1.69012103732017,1.28326477414318,0,0,2.59789249213457,3.54703811665138,3.0331466700887,0.91347103775248,1.29468941823586,1.03909497345377,2.4287945747259,1.52232739156071,1.61430848079241,1.3565037649736,2.11659672844269,0.502666365318702,1.23597483867187,0.86759614151947,0.884610551949874,2.42650274921114,1.10420759230197,1.93950101254089,1.86391761218122,1.46390398505774,1.04723353406728,1.02182822083437,2.63593273913025,1.19980546198682,2.03312363316904,2.69623150928681,4.57500602818627,9.1727677042391,4.86708096538374,4.60287823194595,3.94797284663164,3.40706652442291,3.97173519016234,1.11966273549084,2.52722758433675,1.47309299120532,2.21204753036596,3.90833577536904,2.88099407688559,2.71268672104287,2.31324097114515,1.92170580427275,3.18585863503078,2.58703370739016,4.095791865724,3.21480336285293,2.46331573829528,2.41115305670332,3.89266148915837,1.39300866608867,3.70407845534298,3.78165106955137,1.40442637462647,2.05878325691772,3.9782889915383,2.69263504296152,2.81431271977315,1.80062061461015,1.42046841351126,1.77087808572663,2.00547246753592,0.697601834251224,1.60964040839772,0.817357396570186,1.6455984991348,1.31333971263276,0.891756905004413,0.584799949701329,2.63460138349261,1.61047702512446,2.73376933133365,4.73361216944708,1.32167513193519,0.793351699990633,2.55945900642281,2.78684006232526,1.54640953586512,0.605050573870028,0.667134131534611,0.951128130562796,0,0.823494773620054,1.25667604400135,0.795825888164603,0.58489226135736,0,0.432276099749388,1.39398891278057,0.948339504765408,2.62771579002376,1.1270773567308,2.24016460629846,3.87904974335251,2.52488951605147,1.83385957660346,1.18088118383682,0.941992367048249,1.1105744752962,0.592905254174298,1.66845105716094,2.55526693647164,2.24862112384854,0.811440485554012,1.20588579876208,1.52775511068852,1.15078454980324,0.324270453550071,1.37280706594041,1.43768206527355,0.372140947668503,0.624075346229121,1.01031551178845,0.358794827043824,0,1.10851914099963,2.27389694124582,1.95557971730431,2.54617628662782,1.64283173801951,1.84256883185997,0.952174563544055,1.36593553500459,0.945810864637146,1.99318220683897,1.43509291791738,0.81931657357869,1.72684981865896,0.723245292907558,0,0.54390568381871,0.491764273019036,0.275936746304732,2.40825884981688,2.81308047821288,0.327869890753351,0.504941854408746,0.631016438832513,0.390438744296638,1.07711698866399,0.238968797952552,0.668396022247182,1.13230612315533,0.809621403349789,1.46127928955656,1.18586333383957,2.89189184779626,0.851640511249612,2.67098405500883,1.62886959353576,0.659880491890142,0,3.39892890616974,1.51161778482376,0.565815239267694,0.885905678642318,2.15204603560749,1.03371317267288,2.54473610634254,1.78248689192361,0.948110273807448,1.05418608574999,0,1.36175842301515,3.96134406868882,2.97524972700335,3.85806663056866,2.6601035046341,1.42695054081656,2.79733335023606,2.43571959291679,2.11204537257339,2.75381692122966,0.441056796109924,0.16488625294148,1.29171541356724,1.20625849856312,1.43246812803764,1.64140899745061,0.582961673259701,2.96680483216816,1.19609616558497,1.23832120777933,1.85194527369712,2.26042148405629,1.77702496037333,1.83022538565218,4.24946074984638,2.6590775941495,3.45499934511059,1.90934123603023,3.32152793260192,1.21991680276109,2.16010681643603,1.25452977608681,1.52853794622324,1.07891477107857,1.07449492442937,1.30877970992015,1.68499465279331,1.24267862617385,15.2197093444731,2.0932316446157,1.65458490457098,4.27792614356905,4.1331143512874,3.8859908862879,2.46450201156083,3.6457227756306,4.92838918800841,15.4613837328644,15.2655903316669,1.26404448251271,2.63542779877213,2.2596410576262,2.46849563657811,1.9692936523423,0.993406773906324,2.04332264183947,2.36303243479324,2.42319479875554,2.74344503957999,2.52065462842101,1.65678397257579,1.44317762460494,1.8700304349051,1.81384306892169,2.21985953374065,0.717710852875806,1.17519231454855,0.386379188064381,1.68914227906064,0.915758121336325,0.643105137237198,1.50471631210609,10.1655331671072,6.90487854760765,5.15605962095457,6.8741272937475,6.85082519770642,3.0215755895588,3.37511250115903,2.70192721934532,3.17199686288943,2.5888015587591,3.63255716544618,2.39414924040619,3.75613932659095,0.972426868273176,3.35381060204772,3.49302666055027,1.55572709461131,1.85431551515005,0.962757628775446,3.03236654116557,0.760437899670719,0.754505365544305,1.77918864192777,1.85672941974121,1.7230640686684,1.90517476513229,1.50649623728312,2.70072908649187,1.23625770240992,1.76638704161277,2.05721551431249,1.59728225543404,1.90748951957857,2.47088908274958,2.4468438907986,2.45382362885862,1.82927972872773,2.63069711437843,2.17286582153379,1.12228454331548,1.42362021749009,2.56111654176465,2.45538625901814,1.70430525304563,0.964533054905707,2.99772693525535,1.40358965067245,1.28922632428979,1.53030665655075,1.54413993383661,2.08681052058379
|short_description=p4@Uap1
}}

Revision as of 19:37, 13 September 2013

Short description:p4@Uap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Uap1_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -2bp_to_ENSMUST00000111350_5end
EntrezGene:Uap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Uap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F19.17
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G14.73
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G72.52
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I54.13
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D94.93
testis, neonate N20.CNhs11110.839-18H315.46
testis, neonate N30.CNhs11130.1391-42E215.27
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D32.74
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I83.63
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.74e-1123
neuroblast (sensu Vertebrata)9.74e-1123

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.90e-1454
pre-chordal neural plate2.52e-1449
neural tube3.13e-1352
neural rod3.13e-1352
future spinal cord3.13e-1352
neural keel3.13e-1352
gray matter4.81e-1334
anterior neural tube4.84e-1340
regional part of forebrain8.53e-1339
forebrain8.53e-1339
future forebrain8.53e-1339
neurectoderm9.93e-1364
neural plate9.93e-1364
presumptive neural plate9.93e-1364
brain3.87e-1147
future brain3.87e-1147
brain grey matter6.44e-1129
regional part of telencephalon6.44e-1129
telencephalon6.44e-1129
regional part of brain7.90e-1146
ecto-epithelium5.27e-1073
central nervous system1.81e-0973
nervous system1.17e-0875
structure with developmental contribution from neural crest2.02e-0892
cerebral cortex5.24e-0821
cerebral hemisphere5.24e-0821
pallium5.24e-0821
ectoderm-derived structure1.18e-0795
ectoderm1.18e-0795
presumptive ectoderm1.18e-0795







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