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FFCP PHASE1:Mm9::chr14:24823429..24823480,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16531|HGNC=|MCL_coexpression_id=1130|UniProt=Q08460,C3VLD3|association_with_transcript=-2bp_to_NM_001253358,NM_001253359,NM_001253360,NM_001253361,NM_001253362,NM_001253363,NM_001253364,NM_001253365,NM_001253366,NM_001253367,NM_001253368,NM_001253369,NM_001253370,NM_001253371,NM_001253372,NM_001253373,NM_001253374,NM_001253375,NM_001253376,NM_001253377,NM_001253378,NM_010610,uc007sme.2,uc007smg.1,uc007smh.1,uc007smi.1,uc011zgw.1,uc011zgx.1,uc011zgy.1,uc011zgz.1,uc011zha.1,uc011zhc.1,uc011zhd.1,uc011zhe.1,uc011zhf.1,uc011zhg.1,uc011zhh.1,uc011zhi.1,uc011zhj.1,uc011zhk.1_5end|description=CAGE_peak_1_at_Kcnma1_5end|id=chr14:24823429..24823480,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.80e-16!71;UBERON:0003075!3.80e-16!71;UBERON:0007284!3.80e-16!71;UBERON:0004121!1.31e-14!102;UBERON:0000924!1.31e-14!102;UBERON:0006601!1.31e-14!102;UBERON:0000033!4.95e-14!63;UBERON:0001017!2.42e-13!73;UBERON:0005743!2.42e-13!73;UBERON:0001049!6.25e-13!52;UBERON:0005068!6.25e-13!52;UBERON:0006241!6.25e-13!52;UBERON:0007135!6.25e-13!52;UBERON:0000955!9.85e-13!50;UBERON:0006238!9.85e-13!50;UBERON:0000073!2.65e-12!75;UBERON:0001016!2.65e-12!75;UBERON:0002616!3.58e-12!49;UBERON:0003056!4.93e-10!49;UBERON:0002020!1.33e-09!34;UBERON:0000468!1.88e-09!333;UBERON:0003080!2.07e-09!40;UBERON:0002780!6.34e-09!39;UBERON:0001890!6.34e-09!39;UBERON:0006240!6.34e-09!39;UBERON:0002021!3.63e-08!10;UBERON:0000411!3.63e-08!10;UBERON:0001950!3.63e-08!10;UBERON:0002791!6.89e-08!29;UBERON:0003528!6.89e-08!29;UBERON:0001893!6.89e-08!29;UBERON:0000153!1.77e-07!94;UBERON:0007811!5.52e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.73e-14,54;UBERON:0002346,1.24e-12,64;UBERON:0003075,1.24e-12,64;UBERON:0007284,1.24e-12,64;UBERON:0001049,1.26e-12,52;UBERON:0005068,1.26e-12,52;UBERON:0006241,1.26e-12,52;UBERON:0007135,1.26e-12,52;UBERON:0001017,4.34e-12,73;UBERON:0001016,3.57e-11,75;UBERON:0000955,8.52e-11,47;UBERON:0006238,8.52e-11,47;UBERON:0002616,3.17e-10,46;UBERON:0010371,4.12e-10,73;UBERON:0004121,4.26e-10,95;UBERON:0000924,4.26e-10,95;UBERON:0006601,4.26e-10,95;UBERON:0002020,6.04e-10,34;UBERON:0003080,2.77e-09,40;UBERON:0003056,3.47e-09,49;UBERON:0002021,6.42e-09,10;UBERON:0000411,6.42e-09,10;UBERON:0001950,6.42e-09,10;UBERON:0002780,9.17e-09,39;UBERON:0001890,9.17e-09,39;UBERON:0006240,9.17e-09,39;UBERON:0003528,4.60e-08,29;UBERON:0002791,4.60e-08,29;UBERON:0001893,4.60e-08,29;UBERON:0010314,1.12e-07,92|phase1_expression=1.12104192973356,0,0,0,0,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0.319984845586813,0,0,0,0,0.570070258369122,1.00812051903972,0.886922042621219,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0.218025156380447,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,4.24864567805155,6.34789175126439,3.1691570175309,0,0,0,0,0,0.599200221036809,1.53687322128622,1.03689612308478,0.675029691658453,0.420649922702764,6.56997264128748,3.75476519617743,1.34739879136449,1.24599112323707,0.919218786610021,14.3150645299205,14.1732945274558,12.9029487935245,5.67111037239834,4.02545631850602,5.2091337055676,6.14202597803038,11.8180148106653,16.5022107598955,6.18720029494702,8.25755748634797,7.26957838718672,0.151452386666368,0,5.50742528533188,0,0,0,0,0,5.61777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,2.05530983494308,1.03575153458869,25.2351636410202,1.90833859442749,6.08930956624282,3.45923245884088,6.0289056221049,10.9357497636205,8.79666139307728,0,3.32578520915797,4.42305275974937,8.25010934731787,11.9254419968613,15.5160081003271,5.59175283654366,14.9318206475889,24.0863712835473,2.29911349687732,0,0,0,15.1288545798871,23.33253074375,3.76963056338593,27.9857155509565,36.0558794835766,19.7398642331582,19.1444690419954,3.05518091550949,5.10068579501381,2.27450482590307,38.0899759154518,0.520481771850815,0.689706313300419,0.900310649026746,1.65775299619287,3.74200745332303,3.33095672740609,2.71735001223214,16.039608985819,0.215567992932842,1.13463648100692,2.11141348996739,1.31517439456545,3.89266148915837,7.66154766348766,5.14455341019859,1.59227413454795,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0.439100230582101,0.536825675041487,21.6598647021051,3.19004298375782,0,1.32225283331772,0.213288250535234,0.696710015581316,2.70621668776396,1.81515172161008,1.77902435075896,2.28270751335071,1.89811624617805,3.12928013975621,3.01602250560323,5.57078121715222,6.23885078781184,3.59527763461689,3.02593269824572,2.98711909881551,0,0.913988100877831,0,0.814605311381257,0.775809948670503,1.1221731182451,0.632365371242573,0.147610147979602,0.470996183524124,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0,0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|EntrezGene=16531
|HGNC=
|MCL_coexpression_id=1130
|UniProt=Q08460,C3VLD3
|association_with_transcript=-2bp_to_NM_001253358,NM_001253359,NM_001253360,NM_001253361,NM_001253362,NM_001253363,NM_001253364,NM_001253365,NM_001253366,NM_001253367,NM_001253368,NM_001253369,NM_001253370,NM_001253371,NM_001253372,NM_001253373,NM_001253374,NM_001253375,NM_001253376,NM_001253377,NM_001253378,NM_010610,uc007sme.2,uc007smg.1,uc007smh.1,uc007smi.1,uc011zgw.1,uc011zgx.1,uc011zgy.1,uc011zgz.1,uc011zha.1,uc011zhc.1,uc011zhd.1,uc011zhe.1,uc011zhf.1,uc011zhg.1,uc011zhh.1,uc011zhi.1,uc011zhj.1,uc011zhk.1_5end
|description=CAGE_peak_1_at_Kcnma1_5end
|id=chr14:24823429..24823480,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.80e-16!71;UBERON:0003075!3.80e-16!71;UBERON:0007284!3.80e-16!71;UBERON:0004121!1.31e-14!102;UBERON:0000924!1.31e-14!102;UBERON:0006601!1.31e-14!102;UBERON:0000033!4.95e-14!63;UBERON:0001017!2.42e-13!73;UBERON:0005743!2.42e-13!73;UBERON:0001049!6.25e-13!52;UBERON:0005068!6.25e-13!52;UBERON:0006241!6.25e-13!52;UBERON:0007135!6.25e-13!52;UBERON:0000955!9.85e-13!50;UBERON:0006238!9.85e-13!50;UBERON:0000073!2.65e-12!75;UBERON:0001016!2.65e-12!75;UBERON:0002616!3.58e-12!49;UBERON:0003056!4.93e-10!49;UBERON:0002020!1.33e-09!34;UBERON:0000468!1.88e-09!333;UBERON:0003080!2.07e-09!40;UBERON:0002780!6.34e-09!39;UBERON:0001890!6.34e-09!39;UBERON:0006240!6.34e-09!39;UBERON:0002021!3.63e-08!10;UBERON:0000411!3.63e-08!10;UBERON:0001950!3.63e-08!10;UBERON:0002791!6.89e-08!29;UBERON:0003528!6.89e-08!29;UBERON:0001893!6.89e-08!29;UBERON:0000153!1.77e-07!94;UBERON:0007811!5.52e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.73e-14,54;UBERON:0002346,1.24e-12,64;UBERON:0003075,1.24e-12,64;UBERON:0007284,1.24e-12,64;UBERON:0001049,1.26e-12,52;UBERON:0005068,1.26e-12,52;UBERON:0006241,1.26e-12,52;UBERON:0007135,1.26e-12,52;UBERON:0001017,4.34e-12,73;UBERON:0001016,3.57e-11,75;UBERON:0000955,8.52e-11,47;UBERON:0006238,8.52e-11,47;UBERON:0002616,3.17e-10,46;UBERON:0010371,4.12e-10,73;UBERON:0004121,4.26e-10,95;UBERON:0000924,4.26e-10,95;UBERON:0006601,4.26e-10,95;UBERON:0002020,6.04e-10,34;UBERON:0003080,2.77e-09,40;UBERON:0003056,3.47e-09,49;UBERON:0002021,6.42e-09,10;UBERON:0000411,6.42e-09,10;UBERON:0001950,6.42e-09,10;UBERON:0002780,9.17e-09,39;UBERON:0001890,9.17e-09,39;UBERON:0006240,9.17e-09,39;UBERON:0003528,4.60e-08,29;UBERON:0002791,4.60e-08,29;UBERON:0001893,4.60e-08,29;UBERON:0010314,1.12e-07,92
|phase1_expression=1.12104192973356,0,0,0,0,0.839396359559449,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0.319984845586813,0,0,0,0,0.570070258369122,1.00812051903972,0.886922042621219,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0.218025156380447,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,4.24864567805155,6.34789175126439,3.1691570175309,0,0,0,0,0,0.599200221036809,1.53687322128622,1.03689612308478,0.675029691658453,0.420649922702764,6.56997264128748,3.75476519617743,1.34739879136449,1.24599112323707,0.919218786610021,14.3150645299205,14.1732945274558,12.9029487935245,5.67111037239834,4.02545631850602,5.2091337055676,6.14202597803038,11.8180148106653,16.5022107598955,6.18720029494702,8.25755748634797,7.26957838718672,0.151452386666368,0,5.50742528533188,0,0,0,0,0,5.61777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,2.05530983494308,1.03575153458869,25.2351636410202,1.90833859442749,6.08930956624282,3.45923245884088,6.0289056221049,10.9357497636205,8.79666139307728,0,3.32578520915797,4.42305275974937,8.25010934731787,11.9254419968613,15.5160081003271,5.59175283654366,14.9318206475889,24.0863712835473,2.29911349687732,0,0,0,15.1288545798871,23.33253074375,3.76963056338593,27.9857155509565,36.0558794835766,19.7398642331582,19.1444690419954,3.05518091550949,5.10068579501381,2.27450482590307,38.0899759154518,0.520481771850815,0.689706313300419,0.900310649026746,1.65775299619287,3.74200745332303,3.33095672740609,2.71735001223214,16.039608985819,0.215567992932842,1.13463648100692,2.11141348996739,1.31517439456545,3.89266148915837,7.66154766348766,5.14455341019859,1.59227413454795,0,0,0,0,0.234526059981096,0.36012412292203,0,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0.439100230582101,0.536825675041487,21.6598647021051,3.19004298375782,0,1.32225283331772,0.213288250535234,0.696710015581316,2.70621668776396,1.81515172161008,1.77902435075896,2.28270751335071,1.89811624617805,3.12928013975621,3.01602250560323,5.57078121715222,6.23885078781184,3.59527763461689,3.02593269824572,2.98711909881551,0,0.913988100877831,0,0.814605311381257,0.775809948670503,1.1221731182451,0.632365371242573,0.147610147979602,0.470996183524124,0.123397163921801,0,0.166845105716094,0.393117990226406,0,0,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0,0,0,0.482443521363367,0.739012760666419,0,0.488894929326078,0.509235257325564,0.704070744865506,0.167506257441816,0.714130922658041,0.195133647857799,0.945810864637146,0.8858587585951,0.956728611944923,0.655453258862952,0.345369963731791,0.867894351489069,0,0,0,0.827810238914197,12.2018448390722,10.3146284201139,0,18.6828486131236,1.26203287766503,2.34263246577983,3.01592756825919,0.716906393857656,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,1.18586333383957,20.8858855674175,8.94222536812092,2.49291845134157,1.62886959353576,4.61916344323099,0,0.971122544619926,0.604647113929502,0.565815239267694,0.590603785761546,2.15204603560749,2.32585463851399,2.18120237686503,2.13898427030833,2.21225730555071,1.05418608574999,0,19.4050575279659,0.540183282093931,0.517434735131018,1.07168517515796,3.01478397191865,1.96205699362278,3.1264313914403,3.95804433848979,0,0,5.95426674748397,1.81374878235628,1.45317984026315,1.32688434841943,0.238744688006273,0.492422699235184,0.874442509889552,9.27126510052548,0,0.206386867963223,0.185194527369712,0,0.27338845544205,0,0,0,0,1.90934123603023,0,4.47302827679067,3.88819226958485,7.3180903605064,3.49380101993884,9.84509728609191,11.9847510801737,6.02038666563268,6.48074866458964,16.776161453347,0,1.64468200648377,2.31641886639937,1.55560950675238,2.32487682259916,2.19642963138012,3.52071715937262,2.3436789271911,2.30690557736564,0.966336483304024,1.72818003754719,1.58005560314089,0.202725215290164,0.308132871494482,0.77952493786677,0.537080087002444,0.39736270956253,1.68273629327956,0.147689527174577,0.807731599585181,0.762068066549998,1.20991422164209,0.487289403698762,1.05833025804362,1.63627663054197,14.2840141677583,0,0,0.167884616364078,11.7845652359636,4.69206188627955,3.11357761254351,3.85863082342319,3.00943262421218,27.1080884456192,29.4608151364593,22.3429250241365,21.6535009753046,44.5303637850917,31.7265436903674,37.1262375127493,38.727623477283,32.1731110378785,37.7965027578829,0.207574695168353,2.79317411380722,2.39027048055788,3.64660075602441,1.46729213839588,1.2869045591501,4.4449345560323,7.41726206060019,7.38114182061175,5.05394423527595,6.08350319736575,4.14977951049368,4.21386783614471,3.77748399188729,4.42253110958222,5.23923060411381,3.94006708212509,4.24400285020151,4.12085900803307,3.53277408322554,4.11443102862498,3.90446773550542,4.29185141905178,4.65108533223451,4.70546902076653,3.55381353145041,4.20734337607377,4.73525480588117,5.70377278152619,3.36685362994643,5.21994079746366,5.91026894253381,4.09231043169689,4.64810523557898,4.43685205256625,5.74564329257276,5.14649538579898,5.37177635120746,12.4337415844748,11.2501623750953,8.34724208233517
|short_description=p1@Kcnma1
}}

Revision as of 01:49, 13 September 2013

Short description:p1@Kcnma1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kcnma1_5end
Coexpression cluster:MCL_coexpression_mm9:1130
Association with transcript: -2bp_to_NM_001253358, NM_001253359, NM_001253360, NM_001253361, NM_001253362, NM_001253363, NM_001253364, NM_001253365, NM_001253366, NM_001253367, NM_001253368, NM_001253369, NM_001253370, NM_001253371, NM_001253372, NM_001253373, NM_001253374, NM_001253375, NM_001253376
EntrezGene:Kcnma1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kcnma1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D725.24
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C110.94
adrenal gland, neonate N25.CNhs11223.1377-27I38.80
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F58.25
bone (os femoris), neonate N16.CNhs11225.1525-43A611.93
bone (os femoris), neonate N20.CNhs11195.1350-25C315.52
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B214.93
cerebellum, neonate N30.CNhs11135.1395-42I224.09
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A415.13
corpus striatum, adult.CNhs10487.19-21D823.33
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D527.99
cortex, neonate N30.CNhs11107.1392-42F236.06
diencephalon, adult.CNhs10482.20-12F219.74
diencephalon, neonate N30.CNhs11201.1388-42B219.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G438.09
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C63.74
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A216.04
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E821.66
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C212.20
medulla oblongata, neonate N30.CNhs11200.1396-42A310.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.68
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I920.89
ovary, adult.CNhs10507.91-2I78.94
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G819.41
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.33
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D57.32
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B89.85
stomach, neonate N07.CNhs11210.718-18A911.98
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I16.48
submandibular gland, adult.CNhs10469.59-29C116.78
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E41.21
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.64
tongue, adult.CNhs10499.32-1B414.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E411.78
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A444.53
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A637.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A832.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.80
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C612.43
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B48.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.73e-1454
neurectoderm1.24e-1264
neural plate1.24e-1264
presumptive neural plate1.24e-1264
neural tube1.26e-1252
neural rod1.26e-1252
future spinal cord1.26e-1252
neural keel1.26e-1252
central nervous system4.34e-1273
nervous system3.57e-1175
brain8.52e-1147
future brain8.52e-1147
regional part of brain3.17e-1046
ecto-epithelium4.12e-1073
ectoderm-derived structure4.26e-1095
ectoderm4.26e-1095
presumptive ectoderm4.26e-1095
gray matter6.04e-1034
anterior neural tube2.77e-0940
pre-chordal neural plate3.47e-0949
occipital lobe6.42e-0910
visual cortex6.42e-0910
neocortex6.42e-0910
regional part of forebrain9.17e-0939
forebrain9.17e-0939
future forebrain9.17e-0939
brain grey matter4.60e-0829
regional part of telencephalon4.60e-0829
telencephalon4.60e-0829
structure with developmental contribution from neural crest1.12e-0792







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