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FFCP PHASE1:Mm9::chr13:10360161..10360187,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12671|HGNC=|MCL_coexpression_id=2|UniProt=Q542R4,Q9ERZ3|association_with_transcript=-112bp_to_NM_033269,uc007plb.1_5end|description=CAGE_peak_1_at_Chrm3_5end|id=chr13:10360161..10360187,-|ontology_enrichment_celltype=CL:0000117!3.34e-07!23;CL:0000337!3.34e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-07,23;CL:0000337,1.11e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!4.91e-14!49;UBERON:0000033!1.64e-13!63;UBERON:0002346!3.67e-13!71;UBERON:0003075!3.67e-13!71;UBERON:0007284!3.67e-13!71;UBERON:0001049!6.75e-13!52;UBERON:0005068!6.75e-13!52;UBERON:0006241!6.75e-13!52;UBERON:0007135!6.75e-13!52;UBERON:0000955!7.59e-13!50;UBERON:0006238!7.59e-13!50;UBERON:0001017!1.48e-12!73;UBERON:0005743!1.48e-12!73;UBERON:0003080!1.77e-12!40;UBERON:0002020!2.09e-12!34;UBERON:0002616!2.76e-12!49;UBERON:0002780!6.58e-12!39;UBERON:0001890!6.58e-12!39;UBERON:0006240!6.58e-12!39;UBERON:0000073!2.18e-11!75;UBERON:0001016!2.18e-11!75;UBERON:0002791!1.12e-10!29;UBERON:0003528!1.12e-10!29;UBERON:0001893!1.12e-10!29;UBERON:0004121!2.53e-10!102;UBERON:0000924!2.53e-10!102;UBERON:0006601!2.53e-10!102;UBERON:0002021!2.24e-08!10;UBERON:0000411!2.24e-08!10;UBERON:0001950!2.24e-08!10;UBERON:0000468!1.09e-07!333;UBERON:0000956!5.36e-07!21;UBERON:0001869!5.36e-07!21;UBERON:0000203!5.36e-07!21;UBERON:0002619!6.42e-07!17;UBERON:0000922!9.49e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.89e-15,54;UBERON:0003056,4.03e-14,49;UBERON:0002346,4.25e-14,64;UBERON:0003075,4.25e-14,64;UBERON:0007284,4.25e-14,64;UBERON:0001049,5.16e-14,52;UBERON:0005068,5.16e-14,52;UBERON:0006241,5.16e-14,52;UBERON:0007135,5.16e-14,52;UBERON:0001017,1.08e-13,73;UBERON:0002020,1.80e-13,34;UBERON:0001016,7.70e-13,75;UBERON:0003080,1.20e-12,40;UBERON:0000955,5.09e-12,47;UBERON:0006238,5.09e-12,47;UBERON:0002780,5.77e-12,39;UBERON:0001890,5.77e-12,39;UBERON:0006240,5.77e-12,39;UBERON:0004121,1.67e-11,95;UBERON:0000924,1.67e-11,95;UBERON:0006601,1.67e-11,95;UBERON:0002616,2.28e-11,46;UBERON:0003528,2.71e-11,29;UBERON:0002791,2.71e-11,29;UBERON:0001893,2.71e-11,29;UBERON:0010371,2.59e-10,73;UBERON:0002021,2.69e-10,10;UBERON:0000411,2.69e-10,10;UBERON:0001950,2.69e-10,10;UBERON:0002619,2.11e-07,17;UBERON:0001264,7.26e-07,12;UBERON:0000956,8.25e-07,21;UBERON:0001869,8.25e-07,21;UBERON:0000203,8.25e-07,21|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,1.84667199103079,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0.570070258369122,1.00812051903972,0,0,0,0,1.44425809875637,1.16364251750945,1.63335485009895,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.439372365468944,0.58328969722285,0,0,0,0,0,0,0,1.54701627683233,3.23706337375356,2.64495489636016,5.07065122804943,0.677689064138264,0,0,0,0,0.299600110518405,0,0.414758449233911,1.08004750665353,0.841299845405528,3.42781181284564,2.20868540951614,0.979926393719632,1.15014565221884,0,6.60695285996332,5.10749352340751,5.52983519722476,2.37395317914349,2.65314166446988,4.16730696445408,4.18774498502071,9.00420176050688,9.16789486660861,3.24091444021034,4.27115042397309,1.1183966749518,0,0,1.15945795480671,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,1.08245520505607,0.760079596425296,0,1.1418387971906,0.517875767294343,1.1875371125186,0.346970653532272,0.304465478312141,0.461230994512117,0.753613202763113,0.587943535678524,0.753999547978053,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0.628340120440365,1.02182822083437,0,0,0,7.78911324905078,5.03250663100489,2.38743269014442,14.4274185759589,15.5986428971502,4.1557608911912,6.48965052271031,0.203678727700633,0.746441823660558,0,10.7325346502102,0.520481771850815,0.459804208866946,1.98068342785884,2.41127708537144,2.04109497453984,1.0249097622788,1.40552586839593,2.58703370739016,0,1.32374256117473,0.527853372491847,0.43839146485515,0.834141747676794,0.348252166522167,0.411564272815887,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.710234206755631,0,0.617068451549513,0.930135779001631,0.536546802799238,0.467061369468678,0.987359099480883,1.47750717671186,0.810688095458557,0.730999937126662,0.658650345873152,0.671032093801859,13.24826675954,3.2929475961371,0.660837565967596,0.264450566663544,2.34617075588757,3.94802342162745,2.06187938115349,1.81515172161008,2.44615848229357,1.90225626112559,1.89811624617805,0.494096864172033,1.25667604400135,0.795825888164603,1.16978452271472,1.79763881730844,0.216138049874694,0.796565093017469,0.189667900953082,0.685491075658373,4.50830942692322,1.62921062276251,1.74557238450863,1.47285221769669,2.46622494784603,1.91893192373483,2.04098346193787,0.616985819609003,0.296452627087149,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.757965647081939,0.651859905768103,0.848725428875941,0.938760993154008,1.17254380209271,0.238043640886014,0.390267295715598,0.3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|EntrezGene=12671
|HGNC=
|MCL_coexpression_id=2
|UniProt=Q542R4,Q9ERZ3
|association_with_transcript=-112bp_to_NM_033269,uc007plb.1_5end
|description=CAGE_peak_1_at_Chrm3_5end
|id=chr13:10360161..10360187,-
|ontology_enrichment_celltype=CL:0000117!3.34e-07!23;CL:0000337!3.34e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-07,23;CL:0000337,1.11e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!4.91e-14!49;UBERON:0000033!1.64e-13!63;UBERON:0002346!3.67e-13!71;UBERON:0003075!3.67e-13!71;UBERON:0007284!3.67e-13!71;UBERON:0001049!6.75e-13!52;UBERON:0005068!6.75e-13!52;UBERON:0006241!6.75e-13!52;UBERON:0007135!6.75e-13!52;UBERON:0000955!7.59e-13!50;UBERON:0006238!7.59e-13!50;UBERON:0001017!1.48e-12!73;UBERON:0005743!1.48e-12!73;UBERON:0003080!1.77e-12!40;UBERON:0002020!2.09e-12!34;UBERON:0002616!2.76e-12!49;UBERON:0002780!6.58e-12!39;UBERON:0001890!6.58e-12!39;UBERON:0006240!6.58e-12!39;UBERON:0000073!2.18e-11!75;UBERON:0001016!2.18e-11!75;UBERON:0002791!1.12e-10!29;UBERON:0003528!1.12e-10!29;UBERON:0001893!1.12e-10!29;UBERON:0004121!2.53e-10!102;UBERON:0000924!2.53e-10!102;UBERON:0006601!2.53e-10!102;UBERON:0002021!2.24e-08!10;UBERON:0000411!2.24e-08!10;UBERON:0001950!2.24e-08!10;UBERON:0000468!1.09e-07!333;UBERON:0000956!5.36e-07!21;UBERON:0001869!5.36e-07!21;UBERON:0000203!5.36e-07!21;UBERON:0002619!6.42e-07!17;UBERON:0000922!9.49e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.89e-15,54;UBERON:0003056,4.03e-14,49;UBERON:0002346,4.25e-14,64;UBERON:0003075,4.25e-14,64;UBERON:0007284,4.25e-14,64;UBERON:0001049,5.16e-14,52;UBERON:0005068,5.16e-14,52;UBERON:0006241,5.16e-14,52;UBERON:0007135,5.16e-14,52;UBERON:0001017,1.08e-13,73;UBERON:0002020,1.80e-13,34;UBERON:0001016,7.70e-13,75;UBERON:0003080,1.20e-12,40;UBERON:0000955,5.09e-12,47;UBERON:0006238,5.09e-12,47;UBERON:0002780,5.77e-12,39;UBERON:0001890,5.77e-12,39;UBERON:0006240,5.77e-12,39;UBERON:0004121,1.67e-11,95;UBERON:0000924,1.67e-11,95;UBERON:0006601,1.67e-11,95;UBERON:0002616,2.28e-11,46;UBERON:0003528,2.71e-11,29;UBERON:0002791,2.71e-11,29;UBERON:0001893,2.71e-11,29;UBERON:0010371,2.59e-10,73;UBERON:0002021,2.69e-10,10;UBERON:0000411,2.69e-10,10;UBERON:0001950,2.69e-10,10;UBERON:0002619,2.11e-07,17;UBERON:0001264,7.26e-07,12;UBERON:0000956,8.25e-07,21;UBERON:0001869,8.25e-07,21;UBERON:0000203,8.25e-07,21
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,1.84667199103079,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0.159992422793407,0,0.57423196411502,0,0.430942465371778,0.570070258369122,1.00812051903972,0,0,0,0,1.44425809875637,1.16364251750945,1.63335485009895,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.439372365468944,0.58328969722285,0,0,0,0,0,0,0,1.54701627683233,3.23706337375356,2.64495489636016,5.07065122804943,0.677689064138264,0,0,0,0,0.299600110518405,0,0.414758449233911,1.08004750665353,0.841299845405528,3.42781181284564,2.20868540951614,0.979926393719632,1.15014565221884,0,6.60695285996332,5.10749352340751,5.52983519722476,2.37395317914349,2.65314166446988,4.16730696445408,4.18774498502071,9.00420176050688,9.16789486660861,3.24091444021034,4.27115042397309,1.1183966749518,0,0,1.15945795480671,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,1.08245520505607,0.760079596425296,0,1.1418387971906,0.517875767294343,1.1875371125186,0.346970653532272,0.304465478312141,0.461230994512117,0.753613202763113,0.587943535678524,0.753999547978053,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0.628340120440365,1.02182822083437,0,0,0,7.78911324905078,5.03250663100489,2.38743269014442,14.4274185759589,15.5986428971502,4.1557608911912,6.48965052271031,0.203678727700633,0.746441823660558,0,10.7325346502102,0.520481771850815,0.459804208866946,1.98068342785884,2.41127708537144,2.04109497453984,1.0249097622788,1.40552586839593,2.58703370739016,0,1.32374256117473,0.527853372491847,0.43839146485515,0.834141747676794,0.348252166522167,0.411564272815887,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.710234206755631,0,0.617068451549513,0.930135779001631,0.536546802799238,0.467061369468678,0.987359099480883,1.47750717671186,0.810688095458557,0.730999937126662,0.658650345873152,0.671032093801859,13.24826675954,3.2929475961371,0.660837565967596,0.264450566663544,2.34617075588757,3.94802342162745,2.06187938115349,1.81515172161008,2.44615848229357,1.90225626112559,1.89811624617805,0.494096864172033,1.25667604400135,0.795825888164603,1.16978452271472,1.79763881730844,0.216138049874694,0.796565093017469,0.189667900953082,0.685491075658373,4.50830942692322,1.62921062276251,1.74557238450863,1.47285221769669,2.46622494784603,1.91893192373483,2.04098346193787,0.616985819609003,0.296452627087149,0.166845105716094,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.757965647081939,0.651859905768103,0.848725428875941,0.938760993154008,1.17254380209271,0.238043640886014,0.390267295715598,0.315270288212382,0.664394068946325,0.797273843287435,1.14704320301017,0.690739927463582,1.01254341007058,1.50791283939272,0,0.491764273019036,0.275936746304732,2.56880943980467,3.8679856575427,0,0.757412781613119,0.631016438832513,0.780877488593277,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,1.61924280669958,2.33804686329049,1.58115111178609,8.35435422696698,0.283880170416537,0,0.651547837414304,0.494910368917606,11.9470624505967,0,1.81394134178851,2.64047111658257,3.54362271456927,4.91896236710284,3.87642439752332,7.63420831902762,2.85197902707777,6.95280867458795,10.5418608574999,2.06271086496374,1.36175842301515,0.720244376125241,0.646793418913773,1.92903331528433,2.30542303734956,1.42695054081656,1.64549020602121,0.304464949114599,0.704015124191131,0,1.7642271844397,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0.164140899745061,2.33184669303881,2.96680483216816,0,1.65109494370578,0.740778109478847,0,0,0,0,0,0,5.72802370809068,3.16335993581135,2.23651413839534,3.88819226958485,5.01811910434725,5.24070152990826,4.18079473792944,2.81021749466142,3.14107130380836,0.90730481304255,6.21339313086926,0,0.299033092087958,1.32366792365678,1.75006069509643,1.42075805825504,1.35164900392623,0.938857909166032,0.651021924219751,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.680191150845634,0,0.0897138566094757,0,5.21611903886914,0.375364950902364,0.549454872801795,0.214368379079066,0,22.5900737046827,27.6195141904306,28.0718801585304,25.4342709868658,21.2375581128899,29.4603619981983,19.5756525067224,23.8670237708837,19.4851235863208,18.1216109113137,0.31136204275253,0.798049746802062,1.02440163452481,0.729320151204882,0.838452650511929,0.183843508450014,1.55572709461131,1.03017528619447,1.28367683836726,1.01078884705519,0.50695859978048,1.50901073108861,2.06011316433741,1.02440243847791,1.37845125493472,1.90517476513229,1.39061191133827,1.73618298417335,2.06042950401653,0.883193520806384,0.342869252385415,1.24233064311536,1.1921809497366,1.59881058295561,1.78807822789128,0.930760686808441,0.914639864363863,0.526139422875686,1.49384525230448,2.24456908663095,1.18635018124174,1.57607171800902,0.818462086339379,1.70430525304563,0.385813221962283,1.49886346762768,1.16965804222704,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p1@Chrm3
}}

Revision as of 23:45, 12 September 2013

Short description:p1@Chrm3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Chrm3_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -112bp_to_NM_033269, uc007plb.1_5end
EntrezGene:Chrm3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Chrm3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D514.43
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B26.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G410.73
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E813.25
hippocampus, neonate N00.CNhs11228.627-43G13.29
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D43.89
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A92.81
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.43
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.11e-0723
neuroblast (sensu Vertebrata)1.11e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.89e-1554
pre-chordal neural plate4.03e-1449
neurectoderm4.25e-1464
neural plate4.25e-1464
presumptive neural plate4.25e-1464
neural tube5.16e-1452
neural rod5.16e-1452
future spinal cord5.16e-1452
neural keel5.16e-1452
central nervous system1.08e-1373
gray matter1.80e-1334
nervous system7.70e-1375
anterior neural tube1.20e-1240
brain5.09e-1247
future brain5.09e-1247
regional part of forebrain5.77e-1239
forebrain5.77e-1239
future forebrain5.77e-1239
ectoderm-derived structure1.67e-1195
ectoderm1.67e-1195
presumptive ectoderm1.67e-1195
regional part of brain2.28e-1146
brain grey matter2.71e-1129
regional part of telencephalon2.71e-1129
telencephalon2.71e-1129
ecto-epithelium2.59e-1073
occipital lobe2.69e-1010
visual cortex2.69e-1010
neocortex2.69e-1010
regional part of cerebral cortex2.11e-0717
pancreas7.26e-0712
cerebral cortex8.25e-0721
cerebral hemisphere8.25e-0721
pallium8.25e-0721







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