FFCP PHASE1:Mm9::chr14:58802053..58802059,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=342|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:58802053..58802059,-|id=chr14:58802053..58802059,-|ontology_enrichment_celltype=CL:0002494!5.68e-08!3;CL:0000737!5.68e-08!3;CL:0000746!5.68e-08!3;CL:0000513!5.68e-08!3|ontology_enrichment_celltype_v019_2=CL:0002494,1.99e-20,3;CL:0000737,1.99e-20,3;CL:0000746,1.99e-20,3;CL:0000513,1.99e-20,3;CL:0000680,9.54e-11,6;CL:0000187,9.54e-11,6;CL:0000056,9.54e-11,6;CL:0000222,2.37e-09,7;CL:0000355,1.75e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.25e-38!18;UBERON:0000948!2.25e-38!18;UBERON:0005498!2.25e-38!18;UBERON:0004140!2.25e-38!18;UBERON:0009881!2.25e-38!18;UBERON:0004141!2.25e-38!18;UBERON:0003084!2.25e-38!18;UBERON:0007005!2.25e-38!18;UBERON:0004139!2.25e-38!18;UBERON:0004291!2.25e-38!18;UBERON:0004535!1.12e-29!23;UBERON:0001009!1.12e-29!23;UBERON:0004872!3.57e-20!33;UBERON:0003103!4.47e-15!43;UBERON:0003914!1.22e-13!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.27e-20,18;UBERON:0000948,1.27e-20,18;UBERON:0005498,1.27e-20,18;UBERON:0004140,1.27e-20,18;UBERON:0009881,1.27e-20,18;UBERON:0004141,1.27e-20,18;UBERON:0003084,1.27e-20,18;UBERON:0007005,1.27e-20,18;UBERON:0004139,1.27e-20,18;UBERON:0004291,1.27e-20,18;UBERON:0004535,2.92e-16,23;UBERON:0001009,2.92e-16,23;UBERON:0004872,1.76e-11,33;UBERON:0003103,6.62e-09,43;UBERON:0003914,3.53e-08,47;UBERON:0001134,1.75e-07,9;UBERON:0002036,1.75e-07,9;UBERON:0002385,1.75e-07,9;UBERON:0000486,1.75e-07,9;UBERON:0007503,1.75e-07,9;UBERON:0001015,1.75e-07,9;UBERON:0002329,1.75e-07,9;UBERON:0003082,1.75e-07,9;UBERON:0003059,1.75e-07,9;UBERON:0007282,1.75e-07,9;UBERON:0004290,1.75e-07,9;UBERON:0009618,1.75e-07,9;UBERON:0000383,7.98e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43266719969378,15.9858348606007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.700592054203017,0.329119699826961,0.492502392237286,2.02672023864639,1.60819986167866,0.658650345873152,1.07365135008297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:58802053..58802059,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=342 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:58802053..58802059,- | |||
|id=chr14:58802053..58802059,- | |||
|ontology_enrichment_celltype=CL:0002494!5.68e-08!3;CL:0000737!5.68e-08!3;CL:0000746!5.68e-08!3;CL:0000513!5.68e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.99e-20,3;CL:0000737,1.99e-20,3;CL:0000746,1.99e-20,3;CL:0000513,1.99e-20,3;CL:0000680,9.54e-11,6;CL:0000187,9.54e-11,6;CL:0000056,9.54e-11,6;CL:0000222,2.37e-09,7;CL:0000355,1.75e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.25e-38!18;UBERON:0000948!2.25e-38!18;UBERON:0005498!2.25e-38!18;UBERON:0004140!2.25e-38!18;UBERON:0009881!2.25e-38!18;UBERON:0004141!2.25e-38!18;UBERON:0003084!2.25e-38!18;UBERON:0007005!2.25e-38!18;UBERON:0004139!2.25e-38!18;UBERON:0004291!2.25e-38!18;UBERON:0004535!1.12e-29!23;UBERON:0001009!1.12e-29!23;UBERON:0004872!3.57e-20!33;UBERON:0003103!4.47e-15!43;UBERON:0003914!1.22e-13!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.27e-20,18;UBERON:0000948,1.27e-20,18;UBERON:0005498,1.27e-20,18;UBERON:0004140,1.27e-20,18;UBERON:0009881,1.27e-20,18;UBERON:0004141,1.27e-20,18;UBERON:0003084,1.27e-20,18;UBERON:0007005,1.27e-20,18;UBERON:0004139,1.27e-20,18;UBERON:0004291,1.27e-20,18;UBERON:0004535,2.92e-16,23;UBERON:0001009,2.92e-16,23;UBERON:0004872,1.76e-11,33;UBERON:0003103,6.62e-09,43;UBERON:0003914,3.53e-08,47;UBERON:0001134,1.75e-07,9;UBERON:0002036,1.75e-07,9;UBERON:0002385,1.75e-07,9;UBERON:0000486,1.75e-07,9;UBERON:0007503,1.75e-07,9;UBERON:0001015,1.75e-07,9;UBERON:0002329,1.75e-07,9;UBERON:0003082,1.75e-07,9;UBERON:0003059,1.75e-07,9;UBERON:0007282,1.75e-07,9;UBERON:0004290,1.75e-07,9;UBERON:0009618,1.75e-07,9;UBERON:0000383,7.98e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43266719969378,15.9858348606007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.700592054203017,0.329119699826961,0.492502392237286,2.02672023864639,1.60819986167866,0.658650345873152,1.07365135008297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:58802053..58802059,- | |||
}} |
Revision as of 02:37, 13 September 2013
Short description: | p@chr14:58802053..58802059, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:58802053..58802059, - |
Coexpression cluster: | MCL_coexpression_mm9:342 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.99e-20 | 3 |
striated muscle cell | 1.99e-20 | 3 |
cardiac muscle cell | 1.99e-20 | 3 |
cardiac muscle myoblast | 1.99e-20 | 3 |
muscle precursor cell | 9.54e-11 | 6 |
muscle cell | 9.54e-11 | 6 |
myoblast | 9.54e-11 | 6 |
mesodermal cell | 2.37e-09 | 7 |
multi-potent skeletal muscle stem cell | 1.75e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.27e-20 | 18 |
heart | 1.27e-20 | 18 |
primitive heart tube | 1.27e-20 | 18 |
primary heart field | 1.27e-20 | 18 |
anterior lateral plate mesoderm | 1.27e-20 | 18 |
heart tube | 1.27e-20 | 18 |
heart primordium | 1.27e-20 | 18 |
cardiac mesoderm | 1.27e-20 | 18 |
cardiogenic plate | 1.27e-20 | 18 |
heart rudiment | 1.27e-20 | 18 |
cardiovascular system | 2.92e-16 | 23 |
circulatory system | 2.92e-16 | 23 |
splanchnic layer of lateral plate mesoderm | 1.76e-11 | 33 |
compound organ | 6.62e-09 | 43 |
epithelial tube | 3.53e-08 | 47 |
skeletal muscle tissue | 1.75e-07 | 9 |
striated muscle tissue | 1.75e-07 | 9 |
muscle tissue | 1.75e-07 | 9 |
multilaminar epithelium | 1.75e-07 | 9 |
epithelial vesicle | 1.75e-07 | 9 |
musculature | 1.75e-07 | 9 |
somite | 1.75e-07 | 9 |
myotome | 1.75e-07 | 9 |
presomitic mesoderm | 1.75e-07 | 9 |
presumptive segmental plate | 1.75e-07 | 9 |
dermomyotome | 1.75e-07 | 9 |
trunk paraxial mesoderm | 1.75e-07 | 9 |
musculature of body | 7.98e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.