FFCP PHASE1:Mm9::chr12:40925855..40925899,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=380755|HGNC=|MCL_coexpression_id=19|UniProt=Q3UQS2,B2RVW5|association_with_transcript=2bp_to_ENSMUST00000095760,ENSMUST00000101468,NM_001033437,uc007nkx.1,uc011ylo.1,uc011ylp.1_5end|description=CAGE_peak_1_at_Gm889_5end|id=chr12:40925855..40925899,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.73e-14!18;UBERON:0000948!7.73e-14!18;UBERON:0005498!7.73e-14!18;UBERON:0004140!7.73e-14!18;UBERON:0009881!7.73e-14!18;UBERON:0004141!7.73e-14!18;UBERON:0003084!7.73e-14!18;UBERON:0007005!7.73e-14!18;UBERON:0004139!7.73e-14!18;UBERON:0004291!7.73e-14!18;UBERON:0004535!5.46e-10!23;UBERON:0001009!5.46e-10!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.83e-19,18;UBERON:0000948,1.83e-19,18;UBERON:0005498,1.83e-19,18;UBERON:0004140,1.83e-19,18;UBERON:0009881,1.83e-19,18;UBERON:0004141,1.83e-19,18;UBERON:0003084,1.83e-19,18;UBERON:0007005,1.83e-19,18;UBERON:0004139,1.83e-19,18;UBERON:0004291,1.83e-19,18;UBERON:0004535,4.59e-14,23;UBERON:0001009,4.59e-14,23;UBERON:0004872,2.76e-08,33;UBERON:0003103,6.12e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473193248037357,0.411343300817216,0.84877930359606,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,2.91180329905337,0.441683036920787,0.969750506270444,0,2.04946557908083,1.67557365450764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05220927943237,0,0.459804208866946,0.900310649026746,1.20563854268572,0.272145996605311,1.40925092313335,0.468508622798644,0.258703370739016,0,0.378212160335639,0,0.43839146485515,1.39023624612799,2.089512999133,1.02891068203972,0,0,0,0,14.4988040774851,19.2311369184499,23.948254174315,21.7805156738393,35.4175617145327,32.3960937063494,39.9958384970702,28.16870714696,22.6524764192309,19.9117418395311,34.3109999925309,16.294830718717,25.0001978497318,26.126463719635,18.3862793701709,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0.610953983535943,0.193952487167626,0.210407459670956,0.442655759869801,0.295220295959204,0.31399745568275,0,0,1.00107063429656,0,0,0.405720242777006,0.241177159752417,0.763877555344259,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.977789858652155,1.01847051465113,0,0.335012514883631,0.476087281772027,0.195133647857799,0.315270288212382,0.8858587585951,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,0.160550589987792,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.65954501176592,0.161464426695906,0.422190474497091,0.238744688006273,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0.316011120628178,0,0,0.25984164595559,0.537080087002444,0.596044064343795,2.64429988943931,2.65841148914239,3.33189284828887,2.28620419965,2.62148081355785,2.14407337627455,1.6356013078856,3.27255326108393,5.8949899739955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.512200817262403,0.972426868273176,0.628839487883947,1.10306105070008,2.44471400581777,2.67845574410562,3.85103051510178,2.77966932940177,1.52087579934144,3.01802146217722,3.37109426891577,1.98477972455095,2.52716063404698,1.42888107384922,1.73826488917283,1.73618298417335,1.64834360321323,1.91358596174717,3.77156177623957,2.48466128623072,3.57654284920981,2.0348498328526,2.82328141245992,2.36920902096694,1.46342378298218,3.6829759601298,2.30866993537965,1.12228454331548,1.54225523561426,2.85662998889134,1.63692417267876,1.39443157067369,1.15743966588685,0.249810577937946,2.10538447600868,1.28922632428979,0.956441660344217,3.97064554415128,2.78241402744506|short_description=p1@Gm889}} | ||
|EntrezGene=380755 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt=Q3UQS2,B2RVW5 | |||
|association_with_transcript=2bp_to_ENSMUST00000095760,ENSMUST00000101468,NM_001033437,uc007nkx.1,uc011ylo.1,uc011ylp.1_5end | |||
|description=CAGE_peak_1_at_Gm889_5end | |||
|id=chr12:40925855..40925899,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.73e-14!18;UBERON:0000948!7.73e-14!18;UBERON:0005498!7.73e-14!18;UBERON:0004140!7.73e-14!18;UBERON:0009881!7.73e-14!18;UBERON:0004141!7.73e-14!18;UBERON:0003084!7.73e-14!18;UBERON:0007005!7.73e-14!18;UBERON:0004139!7.73e-14!18;UBERON:0004291!7.73e-14!18;UBERON:0004535!5.46e-10!23;UBERON:0001009!5.46e-10!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.83e-19,18;UBERON:0000948,1.83e-19,18;UBERON:0005498,1.83e-19,18;UBERON:0004140,1.83e-19,18;UBERON:0009881,1.83e-19,18;UBERON:0004141,1.83e-19,18;UBERON:0003084,1.83e-19,18;UBERON:0007005,1.83e-19,18;UBERON:0004139,1.83e-19,18;UBERON:0004291,1.83e-19,18;UBERON:0004535,4.59e-14,23;UBERON:0001009,4.59e-14,23;UBERON:0004872,2.76e-08,33;UBERON:0003103,6.12e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473193248037357,0.411343300817216,0.84877930359606,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,2.91180329905337,0.441683036920787,0.969750506270444,0,2.04946557908083,1.67557365450764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05220927943237,0,0.459804208866946,0.900310649026746,1.20563854268572,0.272145996605311,1.40925092313335,0.468508622798644,0.258703370739016,0,0.378212160335639,0,0.43839146485515,1.39023624612799,2.089512999133,1.02891068203972,0,0,0,0,14.4988040774851,19.2311369184499,23.948254174315,21.7805156738393,35.4175617145327,32.3960937063494,39.9958384970702,28.16870714696,22.6524764192309,19.9117418395311,34.3109999925309,16.294830718717,25.0001978497318,26.126463719635,18.3862793701709,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0.610953983535943,0.193952487167626,0.210407459670956,0.442655759869801,0.295220295959204,0.31399745568275,0,0,1.00107063429656,0,0,0.405720242777006,0.241177159752417,0.763877555344259,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.977789858652155,1.01847051465113,0,0.335012514883631,0.476087281772027,0.195133647857799,0.315270288212382,0.8858587585951,0.318909537314974,0.163863314715738,0.345369963731791,0,0,0,0,0,0.160550589987792,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.65954501176592,0.161464426695906,0.422190474497091,0.238744688006273,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0.288030006257865,0.316011120628178,0,0,0.25984164595559,0.537080087002444,0.596044064343795,2.64429988943931,2.65841148914239,3.33189284828887,2.28620419965,2.62148081355785,2.14407337627455,1.6356013078856,3.27255326108393,5.8949899739955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.512200817262403,0.972426868273176,0.628839487883947,1.10306105070008,2.44471400581777,2.67845574410562,3.85103051510178,2.77966932940177,1.52087579934144,3.01802146217722,3.37109426891577,1.98477972455095,2.52716063404698,1.42888107384922,1.73826488917283,1.73618298417335,1.64834360321323,1.91358596174717,3.77156177623957,2.48466128623072,3.57654284920981,2.0348498328526,2.82328141245992,2.36920902096694,1.46342378298218,3.6829759601298,2.30866993537965,1.12228454331548,1.54225523561426,2.85662998889134,1.63692417267876,1.39443157067369,1.15743966588685,0.249810577937946,2.10538447600868,1.28922632428979,0.956441660344217,3.97064554415128,2.78241402744506 | |||
|short_description=p1@Gm889 | |||
}} |
Revision as of 22:49, 12 September 2013
Short description: | p1@Gm889 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm889_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | 2bp_to_ENSMUST00000095760, ENSMUST00000101468, NM_001033437, uc007nkx.1, uc011ylo.1, uc011ylp.1_5end |
EntrezGene: | Gm889 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.83e-19 | 18 |
heart | 1.83e-19 | 18 |
primitive heart tube | 1.83e-19 | 18 |
primary heart field | 1.83e-19 | 18 |
anterior lateral plate mesoderm | 1.83e-19 | 18 |
heart tube | 1.83e-19 | 18 |
heart primordium | 1.83e-19 | 18 |
cardiac mesoderm | 1.83e-19 | 18 |
cardiogenic plate | 1.83e-19 | 18 |
heart rudiment | 1.83e-19 | 18 |
cardiovascular system | 4.59e-14 | 23 |
circulatory system | 4.59e-14 | 23 |
splanchnic layer of lateral plate mesoderm | 2.76e-08 | 33 |
compound organ | 6.12e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.