FFCP PHASE1:Mm9::chr19:42143186..42143219,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=46|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:42143186..42143219,+|id=chr19:42143186..42143219,+|ontology_enrichment_celltype=CL:0000215!6.89e-08!3;CL:0000115!6.50e-07!1;CL:0000213!6.50e-07!1;CL:0002078!6.50e-07!1;CL:0002262!6.50e-07!1;CL:1000398!6.50e-07!1|ontology_enrichment_celltype_v019_2=CL:0000213,7.47e-44,1;CL:0002078,7.47e-44,1;CL:0000115,7.47e-44,1;CL:0002262,7.47e-44,1;CL:1000398,7.47e-44,1;CL:0000215,1.12e-15,3;CL:0000182,5.59e-10,5;CL:0000222,1.64e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000305!5.73e-07!1;UBERON:0000353!6.50e-07!1;UBERON:0003497!6.50e-07!1;UBERON:0003909!6.50e-07!1;UBERON:0003835!6.50e-07!1;UBERON:0003513!6.50e-07!1;UBERON:0001281!6.50e-07!1;UBERON:0001280!6.50e-07!1;UBERON:0004647!6.50e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.74e-44,1;UBERON:0002394,7.47e-44,1;UBERON:0001281,7.47e-44,1;UBERON:0000353,7.47e-44,1;UBERON:0003497,7.47e-44,1;UBERON:0003909,7.47e-44,1;UBERON:0003928,7.47e-44,1;UBERON:0003835,7.47e-44,1;UBERON:0003513,7.47e-44,1;UBERON:0001280,7.47e-44,1;UBERON:0004647,7.47e-44,1;UBERON:0002294,7.47e-44,1;UBERON:0001173,7.47e-44,1;UBERON:0004912,7.47e-44,1;UBERON:0005171,7.47e-44,1;UBERON:0005631,8.02e-16,3;UBERON:0000478,8.02e-16,3;UBERON:0000158,8.02e-16,3;UBERON:0004871,8.02e-16,3;UBERON:0000055,5.59e-10,5;UBERON:0007500,5.59e-10,5;UBERON:0001981,5.59e-10,5;UBERON:0002049,5.59e-10,5;UBERON:0007798,5.59e-10,5;UBERON:0004537,5.59e-10,5;UBERON:0006965,5.59e-10,5;UBERON:0000058,1.64e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,3.18850937571846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,9.88779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr19:42143186..42143219,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:42143186..42143219,+ | |||
|id=chr19:42143186..42143219,+ | |||
|ontology_enrichment_celltype=CL:0000215!6.89e-08!3;CL:0000115!6.50e-07!1;CL:0000213!6.50e-07!1;CL:0002078!6.50e-07!1;CL:0002262!6.50e-07!1;CL:1000398!6.50e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,7.47e-44,1;CL:0002078,7.47e-44,1;CL:0000115,7.47e-44,1;CL:0002262,7.47e-44,1;CL:1000398,7.47e-44,1;CL:0000215,1.12e-15,3;CL:0000182,5.59e-10,5;CL:0000222,1.64e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000305!5.73e-07!1;UBERON:0000353!6.50e-07!1;UBERON:0003497!6.50e-07!1;UBERON:0003909!6.50e-07!1;UBERON:0003835!6.50e-07!1;UBERON:0003513!6.50e-07!1;UBERON:0001281!6.50e-07!1;UBERON:0001280!6.50e-07!1;UBERON:0004647!6.50e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.74e-44,1;UBERON:0002394,7.47e-44,1;UBERON:0001281,7.47e-44,1;UBERON:0000353,7.47e-44,1;UBERON:0003497,7.47e-44,1;UBERON:0003909,7.47e-44,1;UBERON:0003928,7.47e-44,1;UBERON:0003835,7.47e-44,1;UBERON:0003513,7.47e-44,1;UBERON:0001280,7.47e-44,1;UBERON:0004647,7.47e-44,1;UBERON:0002294,7.47e-44,1;UBERON:0001173,7.47e-44,1;UBERON:0004912,7.47e-44,1;UBERON:0005171,7.47e-44,1;UBERON:0005631,8.02e-16,3;UBERON:0000478,8.02e-16,3;UBERON:0000158,8.02e-16,3;UBERON:0004871,8.02e-16,3;UBERON:0000055,5.59e-10,5;UBERON:0007500,5.59e-10,5;UBERON:0001981,5.59e-10,5;UBERON:0002049,5.59e-10,5;UBERON:0007798,5.59e-10,5;UBERON:0004537,5.59e-10,5;UBERON:0006965,5.59e-10,5;UBERON:0000058,1.64e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,3.18850937571846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,9.88779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:42143186..42143219,+ | |||
}} |
Revision as of 17:39, 13 September 2013
Short description: | p@chr19:42143186..42143219, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:42143186..42143219, + |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 7.47e-44 | 1 |
meso-epithelial cell | 7.47e-44 | 1 |
endothelial cell | 7.47e-44 | 1 |
endothelial cell of sinusoid | 7.47e-44 | 1 |
endothelial cell of hepatic sinusoid | 7.47e-44 | 1 |
barrier cell | 1.12e-15 | 3 |
hepatocyte | 5.59e-10 | 5 |
mesodermal cell | 1.64e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.74e-44 | 1 |
bile duct | 7.47e-44 | 1 |
hepatic sinusoid | 7.47e-44 | 1 |
parenchyma | 7.47e-44 | 1 |
abdomen blood vessel | 7.47e-44 | 1 |
sinusoid | 7.47e-44 | 1 |
digestive system duct | 7.47e-44 | 1 |
abdominal segment blood vessel | 7.47e-44 | 1 |
trunk blood vessel | 7.47e-44 | 1 |
liver parenchyma | 7.47e-44 | 1 |
liver lobule | 7.47e-44 | 1 |
biliary system | 7.47e-44 | 1 |
biliary tree | 7.47e-44 | 1 |
biliary bud | 7.47e-44 | 1 |
hepatic duct | 7.47e-44 | 1 |
extraembryonic membrane | 8.02e-16 | 3 |
extraembryonic structure | 8.02e-16 | 3 |
membranous layer | 8.02e-16 | 3 |
somatic layer of lateral plate mesoderm | 8.02e-16 | 3 |
vessel | 5.59e-10 | 5 |
epithelial tube open at both ends | 5.59e-10 | 5 |
blood vessel | 5.59e-10 | 5 |
vasculature | 5.59e-10 | 5 |
vascular system | 5.59e-10 | 5 |
blood vasculature | 5.59e-10 | 5 |
vascular cord | 5.59e-10 | 5 |
duct | 1.64e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.