FFCP PHASE1:Mm9::chr10:32803282..32803373,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76757|HGNC=|MCL_coexpression_id=35|UniProt=E9Q9U7,E9PWI1,E9Q9K5,Q9CV36,Q8VIN9,Q8VIN8,Q8VIN7|association_with_transcript=0bp_to_ENSMUST00000050626,ENSMUST00000075979,ENSMUST00000095762,NM_029726,uc007etz.2,uc007eua.2,uc007eub.2,uc011xcl.1_5end|description=CAGE_peak_1_at_Trdn_5end|id=chr10:32803282..32803373,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.64e-12!18;UBERON:0000948!2.64e-12!18;UBERON:0005498!2.64e-12!18;UBERON:0004140!2.64e-12!18;UBERON:0009881!2.64e-12!18;UBERON:0004141!2.64e-12!18;UBERON:0003084!2.64e-12!18;UBERON:0007005!2.64e-12!18;UBERON:0004139!2.64e-12!18;UBERON:0004291!2.64e-12!18;UBERON:0004535!1.73e-09!23;UBERON:0001009!1.73e-09!23;UBERON:0003102!9.15e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.49e-13,18;UBERON:0000948,1.49e-13,18;UBERON:0005498,1.49e-13,18;UBERON:0004140,1.49e-13,18;UBERON:0009881,1.49e-13,18;UBERON:0004141,1.49e-13,18;UBERON:0003084,1.49e-13,18;UBERON:0007005,1.49e-13,18;UBERON:0004139,1.49e-13,18;UBERON:0004291,1.49e-13,18;UBERON:0004535,4.11e-10,23;UBERON:0001009,4.11e-10,23;UBERON:0003102,2.63e-08,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771778308107841,2.57880095944881,21.6582278756526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,1.99320353118744,0,0.151452386666368,0,0.869593466105033,0,0,0,0,0,150.415973961106,0,0,0,0.14084341977668,0,0,0,0,0,0,25.2346374179123,0,0,0.173485326766136,0.304465478312141,0.461230994512117,1.20578112442098,4.70354828542819,0.125666591329675,0,4.33798070759735,35.384422077995,176.164099592729,239.171364492606,170.191213850463,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0.486723789203273,0.305518091550949,61.8302643932162,0.252722758433675,25.6739064181498,0,0.689706313300419,2.70093194708024,4.52114453507145,6.46346741937615,13.0675994690547,9.65127762965207,30.7857011179429,0,1.70195472151037,1.58356011747554,1.97276159184817,2.78047249225598,20.1986256582857,6.1734640922383,0,0,0,0,57.5809647648695,63.0875101349149,57.4397976060637,85.7015942818461,95.6274166292383,113.386327972223,134.172086120985,118.308570017232,179.234800533605,162.749691564432,258.399588460496,290.631682221893,304.680773794393,248.75028062476,277.673080415209,0,0,0,0,0,0.232236671860439,0.515469845288373,0,0,0.190225626112559,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.342745537829186,0,1.4255592949172,0,0.140271639780637,0.252946148497029,0,0.470996183524124,0,0,1.50160595144485,0.196558995113203,0,1.21716072833102,0,0,0,0.162135226775035,2.19649130550465,33.0666875012915,1.86070473834252,6.24075346229121,0.505157755894224,7.89348619496414,0,2.95605104266567,4.73728529426212,3.7481944581666,3.05541154395339,0.938760993154008,4.35516269348721,3.09456733151818,3.31727201358258,4.09851374676097,1.99318220683897,5.26200736569707,8.68475567993411,8.28887912956299,2.60368305446721,0,0,4.42587845717133,2.48343071674259,0,0,0,806.897083345176,0,0,0,0,0,0,0,0,0,9.63963949265421,4.5420827266646,1.78065603667255,3.74640006513225,8.08353602565424,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.775284879504663,0,14.9728898921583,1.58018378967908,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,1.98475558249466,179.066470694447,32.2928853391811,26.8392515930294,9.90790455226033,9.84845398470368,0.874442509889552,4.07935664423121,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.609958401380546,0,0.209088296014469,0,0,0.743881101528023,3.92633912976044,0.388844919875379,0,0,0,0,0,0,0,0,0.39061315453185,0.104859344425711,0,98.7942921464479,0.632022241256357,0,0.513554785824136,0.77952493786677,1.07416017400489,2.58285761215644,1.08175904567972,1.47689527174577,2.1202954489111,0.457240839929999,0.201652370273681,0.292373642219257,0,0.116876902181569,185.465453797243,0,0,0,7.53439416725543,2.81523713176773,4.76194223094889,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.853668028770671,8.99494853152688,1.04806581313991,3.67687016900028,30.8922951644245,38.940625818151,34.659274635916,37.6518845528058,42.33104308167,37.9138946186013,52.6265271980739,48.7871661325104,49.164761426005,44.7716069806089,43.1089692514862,38.0031164313499,34.2031297666745,45.7788641617976,40.8014410338644,39.2221531612136,43.1569503804651,37.2086826578761,39.4318303940235,38.2458027670378,39.3295141676461,49.9832451731901,41.4202547229878,23.567975409625,32.031454893527,36.3481539965829,33.1477144967448,41.5230734378389,23.148793317737,7.99393849401427,37.1951257428199,47.2716318906256,113.242692584755,128.825388765797,267.575482305966|short_description=p1@Trdn}} | ||
|EntrezGene=76757 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|UniProt=E9Q9U7,E9PWI1,E9Q9K5,Q9CV36,Q8VIN9,Q8VIN8,Q8VIN7 | |||
|association_with_transcript=0bp_to_ENSMUST00000050626,ENSMUST00000075979,ENSMUST00000095762,NM_029726,uc007etz.2,uc007eua.2,uc007eub.2,uc011xcl.1_5end | |||
|description=CAGE_peak_1_at_Trdn_5end | |||
|id=chr10:32803282..32803373,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.64e-12!18;UBERON:0000948!2.64e-12!18;UBERON:0005498!2.64e-12!18;UBERON:0004140!2.64e-12!18;UBERON:0009881!2.64e-12!18;UBERON:0004141!2.64e-12!18;UBERON:0003084!2.64e-12!18;UBERON:0007005!2.64e-12!18;UBERON:0004139!2.64e-12!18;UBERON:0004291!2.64e-12!18;UBERON:0004535!1.73e-09!23;UBERON:0001009!1.73e-09!23;UBERON:0003102!9.15e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.49e-13,18;UBERON:0000948,1.49e-13,18;UBERON:0005498,1.49e-13,18;UBERON:0004140,1.49e-13,18;UBERON:0009881,1.49e-13,18;UBERON:0004141,1.49e-13,18;UBERON:0003084,1.49e-13,18;UBERON:0007005,1.49e-13,18;UBERON:0004139,1.49e-13,18;UBERON:0004291,1.49e-13,18;UBERON:0004535,4.11e-10,23;UBERON:0001009,4.11e-10,23;UBERON:0003102,2.63e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771778308107841,2.57880095944881,21.6582278756526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,1.99320353118744,0,0.151452386666368,0,0.869593466105033,0,0,0,0,0,150.415973961106,0,0,0,0.14084341977668,0,0,0,0,0,0,25.2346374179123,0,0,0.173485326766136,0.304465478312141,0.461230994512117,1.20578112442098,4.70354828542819,0.125666591329675,0,4.33798070759735,35.384422077995,176.164099592729,239.171364492606,170.191213850463,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0.486723789203273,0.305518091550949,61.8302643932162,0.252722758433675,25.6739064181498,0,0.689706313300419,2.70093194708024,4.52114453507145,6.46346741937615,13.0675994690547,9.65127762965207,30.7857011179429,0,1.70195472151037,1.58356011747554,1.97276159184817,2.78047249225598,20.1986256582857,6.1734640922383,0,0,0,0,57.5809647648695,63.0875101349149,57.4397976060637,85.7015942818461,95.6274166292383,113.386327972223,134.172086120985,118.308570017232,179.234800533605,162.749691564432,258.399588460496,290.631682221893,304.680773794393,248.75028062476,277.673080415209,0,0,0,0,0,0.232236671860439,0.515469845288373,0,0,0.190225626112559,0.474529061544512,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0.342745537829186,0,1.4255592949172,0,0.140271639780637,0.252946148497029,0,0.470996183524124,0,0,1.50160595144485,0.196558995113203,0,1.21716072833102,0,0,0,0.162135226775035,2.19649130550465,33.0666875012915,1.86070473834252,6.24075346229121,0.505157755894224,7.89348619496414,0,2.95605104266567,4.73728529426212,3.7481944581666,3.05541154395339,0.938760993154008,4.35516269348721,3.09456733151818,3.31727201358258,4.09851374676097,1.99318220683897,5.26200736569707,8.68475567993411,8.28887912956299,2.60368305446721,0,0,4.42587845717133,2.48343071674259,0,0,0,806.897083345176,0,0,0,0,0,0,0,0,0,9.63963949265421,4.5420827266646,1.78065603667255,3.74640006513225,8.08353602565424,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0.775284879504663,0,14.9728898921583,1.58018378967908,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,1.98475558249466,179.066470694447,32.2928853391811,26.8392515930294,9.90790455226033,9.84845398470368,0.874442509889552,4.07935664423121,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.609958401380546,0,0.209088296014469,0,0,0.743881101528023,3.92633912976044,0.388844919875379,0,0,0,0,0,0,0,0,0.39061315453185,0.104859344425711,0,98.7942921464479,0.632022241256357,0,0.513554785824136,0.77952493786677,1.07416017400489,2.58285761215644,1.08175904567972,1.47689527174577,2.1202954489111,0.457240839929999,0.201652370273681,0.292373642219257,0,0.116876902181569,185.465453797243,0,0,0,7.53439416725543,2.81523713176773,4.76194223094889,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.853668028770671,8.99494853152688,1.04806581313991,3.67687016900028,30.8922951644245,38.940625818151,34.659274635916,37.6518845528058,42.33104308167,37.9138946186013,52.6265271980739,48.7871661325104,49.164761426005,44.7716069806089,43.1089692514862,38.0031164313499,34.2031297666745,45.7788641617976,40.8014410338644,39.2221531612136,43.1569503804651,37.2086826578761,39.4318303940235,38.2458027670378,39.3295141676461,49.9832451731901,41.4202547229878,23.567975409625,32.031454893527,36.3481539965829,33.1477144967448,41.5230734378389,23.148793317737,7.99393849401427,37.1951257428199,47.2716318906256,113.242692584755,128.825388765797,267.575482305966 | |||
|short_description=p1@Trdn | |||
}} |
Revision as of 16:35, 12 September 2013
Short description: | p1@Trdn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trdn_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 0bp_to_ENSMUST00000050626, ENSMUST00000075979, ENSMUST00000095762, NM_029726, uc007etz.2, uc007eua.2, uc007eub.2, uc011xcl.1_5end |
EntrezGene: | Trdn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.49e-13 | 18 |
heart | 1.49e-13 | 18 |
primitive heart tube | 1.49e-13 | 18 |
primary heart field | 1.49e-13 | 18 |
anterior lateral plate mesoderm | 1.49e-13 | 18 |
heart tube | 1.49e-13 | 18 |
heart primordium | 1.49e-13 | 18 |
cardiac mesoderm | 1.49e-13 | 18 |
cardiogenic plate | 1.49e-13 | 18 |
heart rudiment | 1.49e-13 | 18 |
cardiovascular system | 4.11e-10 | 23 |
circulatory system | 4.11e-10 | 23 |
surface structure | 2.63e-08 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.