FFCP PHASE1:Mm9::chr14:14286644..14286659,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72003|HGNC=|MCL_coexpression_id=360|UniProt=|association_with_transcript=59bp_to_ENSMUST00000147677_5end|description=CAGE_peak_5_at_Synpr_5end|id=chr14:14286644..14286659,+|ontology_enrichment_celltype=CL:0000117!1.92e-09!23;CL:0000337!1.92e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-07,23;CL:0000337,1.65e-07,23;CL:0002610,6.01e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.24e-19!71;UBERON:0003075!4.24e-19!71;UBERON:0007284!4.24e-19!71;UBERON:0000073!5.12e-18!75;UBERON:0001016!5.12e-18!75;UBERON:0001017!2.57e-17!73;UBERON:0005743!2.57e-17!73;UBERON:0007811!7.31e-17!86;UBERON:0004121!1.11e-16!102;UBERON:0000924!1.11e-16!102;UBERON:0006601!1.11e-16!102;UBERON:0001049!2.39e-16!52;UBERON:0005068!2.39e-16!52;UBERON:0006241!2.39e-16!52;UBERON:0007135!2.39e-16!52;UBERON:0000955!1.35e-15!50;UBERON:0006238!1.35e-15!50;UBERON:0000153!2.51e-15!94;UBERON:0003056!3.69e-15!49;UBERON:0000033!4.74e-15!63;UBERON:0002616!8.29e-15!49;UBERON:0003080!3.20e-14!40;UBERON:0002020!1.42e-13!34;UBERON:0002780!1.58e-13!39;UBERON:0001890!1.58e-13!39;UBERON:0006240!1.58e-13!39;UBERON:0002791!1.01e-10!29;UBERON:0003528!1.01e-10!29;UBERON:0001893!1.01e-10!29;UBERON:0002021!2.34e-09!10;UBERON:0000411!2.34e-09!10;UBERON:0001950!2.34e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.48e-30,54;UBERON:0001016,3.57e-27,75;UBERON:0001017,3.10e-26,73;UBERON:0001049,4.92e-25,52;UBERON:0005068,4.92e-25,52;UBERON:0006241,4.92e-25,52;UBERON:0007135,4.92e-25,52;UBERON:0000955,3.03e-24,47;UBERON:0006238,3.03e-24,47;UBERON:0002021,4.19e-23,10;UBERON:0000411,4.19e-23,10;UBERON:0001950,4.19e-23,10;UBERON:0002346,1.27e-22,64;UBERON:0003075,1.27e-22,64;UBERON:0007284,1.27e-22,64;UBERON:0002616,2.00e-22,46;UBERON:0003080,6.53e-22,40;UBERON:0004121,2.49e-21,95;UBERON:0000924,2.49e-21,95;UBERON:0006601,2.49e-21,95;UBERON:0002020,3.05e-21,34;UBERON:0002780,2.63e-20,39;UBERON:0001890,2.63e-20,39;UBERON:0006240,2.63e-20,39;UBERON:0010371,5.09e-19,73;UBERON:0003056,1.26e-18,49;UBERON:0003528,3.46e-18,29;UBERON:0002791,3.46e-18,29;UBERON:0001893,3.46e-18,29;UBERON:0010314,9.83e-14,92;UBERON:0002619,1.08e-12,17;UBERON:0000956,4.11e-12,21;UBERON:0001869,4.11e-12,21;UBERON:0000203,4.11e-12,21;UBERON:0011216,3.79e-08,194;UBERON:0000025,4.49e-08,114;UBERON:0002420,2.09e-07,8;UBERON:0007245,2.09e-07,8;UBERON:0010009,2.09e-07,8;UBERON:0010011,2.09e-07,8;UBERON:0000454,2.09e-07,8;UBERON:0004111,3.72e-07,122;UBERON:0004684,6.01e-07,3;UBERON:0002275,6.01e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,0,0.210324961351382,0.571301968807607,1.98781686856452,0.244981598429908,0.287536413054709,0,2.20231761998777,2.29837208553338,1.22885226604995,0.659431438650969,1.18933936683133,0.52091337055676,0.837548997004143,5.6276261003168,2.59757021220577,0.883885756421003,1.85083185038834,1.3047961207771,0.151452386666368,1.66257432234928,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.753613202763113,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,2.84602214869163,23.33253074375,8.67015029578764,6.95297280769106,9.71718737855256,4.1557608911912,8.59878694259116,0.305518091550949,0.124406970610093,0,0.210441855886474,0,0,1.0803727788321,0.30140963567143,0.612328492361951,0.512454881139399,0.281105173679186,0.517406741478031,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0.515469845288373,0.403367049246685,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.610953983535943,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,1.75817529888305,0,0,0.315508219416257,0.780877488593277,2.36965737506079,0,0,0,0,0,0,31.8108103257589,0,0,1.30309567482861,0,0,0,0,0.565815239267694,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,1.95074257006501,0.535106452806212,0.822745103010605,0.913394847343798,0,0,0.661585194164886,0,0,0,0.119372344003136,0.328281799490123,0,0.927126510052548,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.203319467126849,0.972048067396211,0.209088296014469,0.436725127492355,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0.810900861160657,3.80030541509861,3.37794139742267,0.895133478337407,1.19208812868759,0.600977247599844,0.738447635872886,0.908698049533329,0.381034033274999,0.604957110821043,0.194915761479505,0.577271049841977,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,5.0827665835536,5.5239028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| ||
|EntrezGene=72003 | |||
|HGNC= | |||
|MCL_coexpression_id=360 | |||
|UniProt= | |||
|association_with_transcript=59bp_to_ENSMUST00000147677_5end | |||
|description=CAGE_peak_5_at_Synpr_5end | |||
|id=chr14:14286644..14286659,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.92e-09!23;CL:0000337!1.92e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.65e-07,23;CL:0000337,1.65e-07,23;CL:0002610,6.01e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.24e-19!71;UBERON:0003075!4.24e-19!71;UBERON:0007284!4.24e-19!71;UBERON:0000073!5.12e-18!75;UBERON:0001016!5.12e-18!75;UBERON:0001017!2.57e-17!73;UBERON:0005743!2.57e-17!73;UBERON:0007811!7.31e-17!86;UBERON:0004121!1.11e-16!102;UBERON:0000924!1.11e-16!102;UBERON:0006601!1.11e-16!102;UBERON:0001049!2.39e-16!52;UBERON:0005068!2.39e-16!52;UBERON:0006241!2.39e-16!52;UBERON:0007135!2.39e-16!52;UBERON:0000955!1.35e-15!50;UBERON:0006238!1.35e-15!50;UBERON:0000153!2.51e-15!94;UBERON:0003056!3.69e-15!49;UBERON:0000033!4.74e-15!63;UBERON:0002616!8.29e-15!49;UBERON:0003080!3.20e-14!40;UBERON:0002020!1.42e-13!34;UBERON:0002780!1.58e-13!39;UBERON:0001890!1.58e-13!39;UBERON:0006240!1.58e-13!39;UBERON:0002791!1.01e-10!29;UBERON:0003528!1.01e-10!29;UBERON:0001893!1.01e-10!29;UBERON:0002021!2.34e-09!10;UBERON:0000411!2.34e-09!10;UBERON:0001950!2.34e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.48e-30,54;UBERON:0001016,3.57e-27,75;UBERON:0001017,3.10e-26,73;UBERON:0001049,4.92e-25,52;UBERON:0005068,4.92e-25,52;UBERON:0006241,4.92e-25,52;UBERON:0007135,4.92e-25,52;UBERON:0000955,3.03e-24,47;UBERON:0006238,3.03e-24,47;UBERON:0002021,4.19e-23,10;UBERON:0000411,4.19e-23,10;UBERON:0001950,4.19e-23,10;UBERON:0002346,1.27e-22,64;UBERON:0003075,1.27e-22,64;UBERON:0007284,1.27e-22,64;UBERON:0002616,2.00e-22,46;UBERON:0003080,6.53e-22,40;UBERON:0004121,2.49e-21,95;UBERON:0000924,2.49e-21,95;UBERON:0006601,2.49e-21,95;UBERON:0002020,3.05e-21,34;UBERON:0002780,2.63e-20,39;UBERON:0001890,2.63e-20,39;UBERON:0006240,2.63e-20,39;UBERON:0010371,5.09e-19,73;UBERON:0003056,1.26e-18,49;UBERON:0003528,3.46e-18,29;UBERON:0002791,3.46e-18,29;UBERON:0001893,3.46e-18,29;UBERON:0010314,9.83e-14,92;UBERON:0002619,1.08e-12,17;UBERON:0000956,4.11e-12,21;UBERON:0001869,4.11e-12,21;UBERON:0000203,4.11e-12,21;UBERON:0011216,3.79e-08,194;UBERON:0000025,4.49e-08,114;UBERON:0002420,2.09e-07,8;UBERON:0007245,2.09e-07,8;UBERON:0010009,2.09e-07,8;UBERON:0010011,2.09e-07,8;UBERON:0000454,2.09e-07,8;UBERON:0004111,3.72e-07,122;UBERON:0004684,6.01e-07,3;UBERON:0002275,6.01e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.414758449233911,0,0.210324961351382,0.571301968807607,1.98781686856452,0.244981598429908,0.287536413054709,0,2.20231761998777,2.29837208553338,1.22885226604995,0.659431438650969,1.18933936683133,0.52091337055676,0.837548997004143,5.6276261003168,2.59757021220577,0.883885756421003,1.85083185038834,1.3047961207771,0.151452386666368,1.66257432234928,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0.753613202763113,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,2.84602214869163,23.33253074375,8.67015029578764,6.95297280769106,9.71718737855256,4.1557608911912,8.59878694259116,0.305518091550949,0.124406970610093,0,0.210441855886474,0,0,1.0803727788321,0.30140963567143,0.612328492361951,0.512454881139399,0.281105173679186,0.517406741478031,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0.515469845288373,0.403367049246685,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0.610953983535943,0,0.140271639780637,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,1.75817529888305,0,0,0.315508219416257,0.780877488593277,2.36965737506079,0,0,0,0,0,0,31.8108103257589,0,0,1.30309567482861,0,0,0,0,0.565815239267694,0,0,0.258428293168221,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,1.95074257006501,0.535106452806212,0.822745103010605,0.913394847343798,0,0,0.661585194164886,0,0,0,0.119372344003136,0.328281799490123,0,0.927126510052548,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.203319467126849,0.972048067396211,0.209088296014469,0.436725127492355,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0.810900861160657,3.80030541509861,3.37794139742267,0.895133478337407,1.19208812868759,0.600977247599844,0.738447635872886,0.908698049533329,0.381034033274999,0.604957110821043,0.194915761479505,0.577271049841977,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,5.0827665835536,5.52390283808612,8.59343270159095,2.57779773515531,4.7955776383945,4.5323633843382,10.1253375034771,4.05289082901798,5.43770890781046,2.5888015587591,0.103787347584177,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0,0.252697211763798,0.50695859978048,0.377252682772152,0.37456602987953,0.576226371643824,0.229741875822453,0,0.463537303779422,0.964546102318525,0,0.294397840268795,0.685738504770831,0.532427418478012,0,0.290692833264657,0.376437521661322,0.25384382367503,0.365855945745545,0.789209134313529,0.271608227691724,0.561142271657738,0.355905054372522,0.197008964751127,0,0.619747364743864,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0.882365676478062,0.695603506861264 | |||
|short_description=p5@Synpr | |||
}} |
Revision as of 01:41, 13 September 2013
Short description: | p5@Synpr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Synpr_5end |
Coexpression cluster: | MCL_coexpression_mm9:360 |
Association with transcript: | 59bp_to_ENSMUST00000147677_5end |
EntrezGene: | Synpr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.65e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.65e-07 | 23 |
raphe nuclei neuron | 6.01e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.