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FFCP PHASE1:Mm9::chr10:90545449..90545518,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=11783|HGNC=|UniProt=O88879,Q80VR5,G3XA09,Q5DU30|association_with_transcript=0bp_to_ENSMUST00000020157,ENSMUST00000160788,ENSMUST00000162618,NM_001042558,NM_009684,uc007gtg.1,uc007gth.1,uc007gti.1,uc007gtj.1,uc007gtk.1_5end|description=CAGE_peak_1_at_Apaf1_5end|id=chr10:90545449..90545518,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.29e-07,47|phase1_expression=11.5307169915452,28.2670080187882,18.654968814971,18.1478526784098,20.5367249278002,12.0873075776561,10.0453435456076,3.48632973292256,3.94208422024667,2.10658073689794,3.08192342805909,2.31339261086476,6.33442700745461,4.10875891369288,10.3264026162855,11.3386149738303,5.59649502502517,7.09789872056035,5.89592064504677,7.63901373236454,4.25216450755349,8.14185799847259,5.22399578277871,10.5594999043648,13.7645568640302,20.6723507081407,18.0920038386811,17.453169847557,8.7410772949932,8.31699428207772,9.75614246883341,5.71527606113668,15.3766196896143,0,7.22129049378186,7.64679368649065,8.37094360675713,51.0608589499027,30.4720784364282,41.8818995179039,25.2939539853336,43.7149110373405,47.0945042440219,10.4494358919729,11.0500855029271,13.7660064121261,7.82391344348039,3.70642765846759,1.75748946187577,2.3331587888914,6.7193482380174,1.43752564364972,8.72469551500229,5.80289713609076,12.0993767691287,10.8048963135098,6.87680255853016,12.8918023069361,13.1505699558739,8.46385566835253,11.4089652631112,9.82649143000483,3.55717918444456,3.1496490104849,2.96659908770092,5.6838409195688,2.39680088414724,3.07374644257244,9.85051316930538,11.8805225731888,8.2026734927039,2.28520787523043,3.75476519617743,11.0241719293459,10.4471563409878,6.43453150627015,5.50579404996943,2.17068474744819,1.84327839907492,14.2437190748609,12.4423195299277,15.106487746146,3.35019598801657,4.50210088025344,4.12555268997387,6.48182888042069,6.97621235915604,10.6247684120421,4.08921443999194,6.34801104896998,9.56552812715537,4.30211938490693,0.679971333707751,2.15881276655127,4.54843492213368,0.896053774194671,4.35377702408431,7.15807354827843,6.49465011507172,6.71345191569646,5.35204995151386,8.98285341900225,12.7402619853323,0,5.62876706629157,4.81383744402687,4.54972000513305,3.88225191044804,11.6522047641227,8.01587550950054,13.0113995074602,7.61163695780353,10.6083128737787,7.83757730873637,11.8764594207062,4.64966387919799,8.65182387070309,5.35017620603673,23.8844849026466,12.2942805960031,13.6921741445444,13.091631834651,3.72783522436244,2.04946557908083,4.39838084308256,22.2247638031475,4.31334448221313,6.59893004092748,8.38663498682227,3.2953940669061,4.57500602818627,10.9319286338192,2.78118912307642,1.53429274398198,1.66230435647648,3.40706652442291,16.9053343991525,14.5556155613809,2.52722758433675,2.52530227063769,13.5325260681212,13.104419952708,13.3245976055958,13.4127287873786,16.7369787912267,14.8611915530426,13.6804517857204,6.20888089773638,12.287375597172,17.2086532952716,19.8824770305262,13.8093311429372,14.1804097105055,17.0643561595862,15.8452245034116,15.9227413454795,4.91549231119264,6.69104558498259,4.26245249093389,13.2560494422721,13.1334593589414,10.9837857491219,10.180023630164,9.64144735562279,8.79322543458056,11.39416329277,12.0723030629829,6.65562451492866,6.7469538464527,8.53670813211295,8.51222500231485,8.33339928324394,6.14740322814942,8.32079796314305,3.36463917702604,14.6124549578584,37.0069036941854,14.8092317331585,10.8777007772969,16.0243303583703,13.4022159774977,13.1094291005173,20.9035361214178,19.403013863481,15.6594590309689,12.8465184684728,20.3581519128218,16.5133871794155,19.3014446247929,23.3693046250098,22.0460810872188,18.1218558661474,8.34538764193559,13.0243304375091,18.0332377076929,10.7935203758017,10.6673867942194,10.8009162631091,10.1178459398812,4.87113488332687,5.02395929092399,4.31890073726302,2.37162101669719,10.67808676583,11.596980711679,12.367416181167,12.5773275260872,10.6117950291063,14.2590476997595,15.8232875597946,12.8086829152278,8.51140380883053,12.9391385874619,11.5363693777236,7.80094182786401,4.04126204715379,4.12614051100398,5.78932225636041,11.8242041706627,12.3169417650815,12.0594082567099,11.5426658327128,13.3773441524446,12.3954630506944,14.7587057349329,16.1960927721973,17.4975009957872,16.6098517236581,18.656207932926,14.5838350097007,14.850908440467,15.7667473853848,1.50791283939272,9.24639662491806,3.44234991113325,6.34654516500885,4.17431533968259,3.04750385139728,5.73772308818364,6.05930225290495,10.4117712407365,12.1036010731958,11.2020166821055,15.0550342710108,12.6995244226965,13.0215204162863,15.7876173653209,14.9050487534769,11.8586333383957,3.21321316421807,12.7746076687442,12.4645922567079,16.2886959353576,10.8880281161873,6.63725691699814,13.110154352369,10.883648050731,13.013750503157,6.20133975049623,11.6825356218692,17.573123935439,8.36127577798263,9.26893183800275,5.37262488490887,6.32511651449993,7.21948802737308,9.19186935535228,14.9450708045987,9.05510786479281,12.2172109968008,9.93105308396732,8.38333442729732,9.05019613311665,7.61162372786498,11.7335854031855,12.4980921809654,5.95426674748397,7.74965388824956,14.2088695492397,11.0372652618525,9.19167048824151,11.3257220824092,22.7355052571284,4.07935664423121,17.0870880797853,19.1939787205797,19.26023084645,21.4740040985348,16.403307326523,18.5310320297283,4.24946074984638,4.19854356970974,4.42239916174156,1.90934123603023,14.0769517143605,14.0290432317526,10.9085394230019,9.61806161666556,9.17122767733946,9.71023293970709,10.579642332843,8.37619014348895,8.29535829067474,3.72803587852155,0.56369293868419,13.6060056900021,9.59659244651166,13.2226808073952,12.3993430538622,12.5027532863176,11.6183666259296,11.1975770965797,9.85677837601682,3.62376181239009,4.60848010012585,20.5407228408316,13.7853146397312,13.1470025170979,11.9527157139571,14.3221356533985,16.2918710920637,16.5869720337557,15.6550898805052,15.6497997419629,16.61308385079,15.7288848813471,16.9576712487169,17.51055517854,18.2327967403248,5.8949899739955,17.314904363177,24.8507382808248,23.1680770582428,5.40930863290133,13.7008207079363,11.1722490803032,9.4322086794789,9.02829787263654,3.3885110557024,2.76195141904306,3.43737308063638,1.54667864109319,4.7955776383945,2.2661816921691,0,2.70192721934532,0.453142408984205,1.03552062350364,19.7195960409936,19.1531939232495,13.8294220660849,11.9122291363464,14.0440818960748,13.7882631337511,15.5572709461131,14.6284890639615,16.6877988987744,16.9307131881744,14.9552786935241,12.8265912142532,14.1398676279522,13.8294329194518,12.9804159839686,14.2888107384922,13.6743504614929,10.8029163459675,15.2471783297223,15.0142898537085,12.6861623382604,14.730491911225,10.7296285476294,13.8079095800712,13.3635320189769,12.6075765758598,13.1708140468396,9.47050961176234,12.4939784738193,14.0285567914435,13.2871220299075,12.6085737440721,11.4584692087513,13.0146946596211,13.5034627686799,12.2407183189594,13.3341016813883,12.247650080753,13.0076065806813,12.1325280515734,10.2021847672985|short_description=p1@Apaf1}}
|EntrezGene=11783
|HGNC=
|UniProt=O88879,Q80VR5,G3XA09,Q5DU30
|association_with_transcript=0bp_to_ENSMUST00000020157,ENSMUST00000160788,ENSMUST00000162618,NM_001042558,NM_009684,uc007gtg.1,uc007gth.1,uc007gti.1,uc007gtj.1,uc007gtk.1_5end
|description=CAGE_peak_1_at_Apaf1_5end
|id=chr10:90545449..90545518,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.29e-07,47
|phase1_expression=11.5307169915452,28.2670080187882,18.654968814971,18.1478526784098,20.5367249278002,12.0873075776561,10.0453435456076,3.48632973292256,3.94208422024667,2.10658073689794,3.08192342805909,2.31339261086476,6.33442700745461,4.10875891369288,10.3264026162855,11.3386149738303,5.59649502502517,7.09789872056035,5.89592064504677,7.63901373236454,4.25216450755349,8.14185799847259,5.22399578277871,10.5594999043648,13.7645568640302,20.6723507081407,18.0920038386811,17.453169847557,8.7410772949932,8.31699428207772,9.75614246883341,5.71527606113668,15.3766196896143,0,7.22129049378186,7.64679368649065,8.37094360675713,51.0608589499027,30.4720784364282,41.8818995179039,25.2939539853336,43.7149110373405,47.0945042440219,10.4494358919729,11.0500855029271,13.7660064121261,7.82391344348039,3.70642765846759,1.75748946187577,2.3331587888914,6.7193482380174,1.43752564364972,8.72469551500229,5.80289713609076,12.0993767691287,10.8048963135098,6.87680255853016,12.8918023069361,13.1505699558739,8.46385566835253,11.4089652631112,9.82649143000483,3.55717918444456,3.1496490104849,2.96659908770092,5.6838409195688,2.39680088414724,3.07374644257244,9.85051316930538,11.8805225731888,8.2026734927039,2.28520787523043,3.75476519617743,11.0241719293459,10.4471563409878,6.43453150627015,5.50579404996943,2.17068474744819,1.84327839907492,14.2437190748609,12.4423195299277,15.106487746146,3.35019598801657,4.50210088025344,4.12555268997387,6.48182888042069,6.97621235915604,10.6247684120421,4.08921443999194,6.34801104896998,9.56552812715537,4.30211938490693,0.679971333707751,2.15881276655127,4.54843492213368,0.896053774194671,4.35377702408431,7.15807354827843,6.49465011507172,6.71345191569646,5.35204995151386,8.98285341900225,12.7402619853323,0,5.62876706629157,4.81383744402687,4.54972000513305,3.88225191044804,11.6522047641227,8.01587550950054,13.0113995074602,7.61163695780353,10.6083128737787,7.83757730873637,11.8764594207062,4.64966387919799,8.65182387070309,5.35017620603673,23.8844849026466,12.2942805960031,13.6921741445444,13.091631834651,3.72783522436244,2.04946557908083,4.39838084308256,22.2247638031475,4.31334448221313,6.59893004092748,8.38663498682227,3.2953940669061,4.57500602818627,10.9319286338192,2.78118912307642,1.53429274398198,1.66230435647648,3.40706652442291,16.9053343991525,14.5556155613809,2.52722758433675,2.52530227063769,13.5325260681212,13.104419952708,13.3245976055958,13.4127287873786,16.7369787912267,14.8611915530426,13.6804517857204,6.20888089773638,12.287375597172,17.2086532952716,19.8824770305262,13.8093311429372,14.1804097105055,17.0643561595862,15.8452245034116,15.9227413454795,4.91549231119264,6.69104558498259,4.26245249093389,13.2560494422721,13.1334593589414,10.9837857491219,10.180023630164,9.64144735562279,8.79322543458056,11.39416329277,12.0723030629829,6.65562451492866,6.7469538464527,8.53670813211295,8.51222500231485,8.33339928324394,6.14740322814942,8.32079796314305,3.36463917702604,14.6124549578584,37.0069036941854,14.8092317331585,10.8777007772969,16.0243303583703,13.4022159774977,13.1094291005173,20.9035361214178,19.403013863481,15.6594590309689,12.8465184684728,20.3581519128218,16.5133871794155,19.3014446247929,23.3693046250098,22.0460810872188,18.1218558661474,8.34538764193559,13.0243304375091,18.0332377076929,10.7935203758017,10.6673867942194,10.8009162631091,10.1178459398812,4.87113488332687,5.02395929092399,4.31890073726302,2.37162101669719,10.67808676583,11.596980711679,12.367416181167,12.5773275260872,10.6117950291063,14.2590476997595,15.8232875597946,12.8086829152278,8.51140380883053,12.9391385874619,11.5363693777236,7.80094182786401,4.04126204715379,4.12614051100398,5.78932225636041,11.8242041706627,12.3169417650815,12.0594082567099,11.5426658327128,13.3773441524446,12.3954630506944,14.7587057349329,16.1960927721973,17.4975009957872,16.6098517236581,18.656207932926,14.5838350097007,14.850908440467,15.7667473853848,1.50791283939272,9.24639662491806,3.44234991113325,6.34654516500885,4.17431533968259,3.04750385139728,5.73772308818364,6.05930225290495,10.4117712407365,12.1036010731958,11.2020166821055,15.0550342710108,12.6995244226965,13.0215204162863,15.7876173653209,14.9050487534769,11.8586333383957,3.21321316421807,12.7746076687442,12.4645922567079,16.2886959353576,10.8880281161873,6.63725691699814,13.110154352369,10.883648050731,13.013750503157,6.20133975049623,11.6825356218692,17.573123935439,8.36127577798263,9.26893183800275,5.37262488490887,6.32511651449993,7.21948802737308,9.19186935535228,14.9450708045987,9.05510786479281,12.2172109968008,9.93105308396732,8.38333442729732,9.05019613311665,7.61162372786498,11.7335854031855,12.4980921809654,5.95426674748397,7.74965388824956,14.2088695492397,11.0372652618525,9.19167048824151,11.3257220824092,22.7355052571284,4.07935664423121,17.0870880797853,19.1939787205797,19.26023084645,21.4740040985348,16.403307326523,18.5310320297283,4.24946074984638,4.19854356970974,4.42239916174156,1.90934123603023,14.0769517143605,14.0290432317526,10.9085394230019,9.61806161666556,9.17122767733946,9.71023293970709,10.579642332843,8.37619014348895,8.29535829067474,3.72803587852155,0.56369293868419,13.6060056900021,9.59659244651166,13.2226808073952,12.3993430538622,12.5027532863176,11.6183666259296,11.1975770965797,9.85677837601682,3.62376181239009,4.60848010012585,20.5407228408316,13.7853146397312,13.1470025170979,11.9527157139571,14.3221356533985,16.2918710920637,16.5869720337557,15.6550898805052,15.6497997419629,16.61308385079,15.7288848813471,16.9576712487169,17.51055517854,18.2327967403248,5.8949899739955,17.314904363177,24.8507382808248,23.1680770582428,5.40930863290133,13.7008207079363,11.1722490803032,9.4322086794789,9.02829787263654,3.3885110557024,2.76195141904306,3.43737308063638,1.54667864109319,4.7955776383945,2.2661816921691,0,2.70192721934532,0.453142408984205,1.03552062350364,19.7195960409936,19.1531939232495,13.8294220660849,11.9122291363464,14.0440818960748,13.7882631337511,15.5572709461131,14.6284890639615,16.6877988987744,16.9307131881744,14.9552786935241,12.8265912142532,14.1398676279522,13.8294329194518,12.9804159839686,14.2888107384922,13.6743504614929,10.8029163459675,15.2471783297223,15.0142898537085,12.6861623382604,14.730491911225,10.7296285476294,13.8079095800712,13.3635320189769,12.6075765758598,13.1708140468396,9.47050961176234,12.4939784738193,14.0285567914435,13.2871220299075,12.6085737440721,11.4584692087513,13.0146946596211,13.5034627686799,12.2407183189594,13.3341016813883,12.247650080753,13.0076065806813,12.1325280515734,10.2021847672985
|short_description=p1@Apaf1
}}

Revision as of 17:57, 12 September 2013

Short description:p1@Apaf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Apaf1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000020157, ENSMUST00000160788, ENSMUST00000162618, NM_001042558, NM_009684, uc007gtg.1, uc007gth.1, uc007gti.1, uc007gtj.1, uc007gtk.1_5end
EntrezGene:Apaf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Apaf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.27
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.15
CD326+ enterocyte, pool2.CNhs13197.11849-124I420.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.34
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.90
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.76
GP2+ M cell, pool1.CNhs13228.11845-124H920.67
GP2+ M cell, pool2.CNhs13231.11846-124I118.09
GP2+ M cell, pool3.CNhs13240.11847-124I217.45
Ileum epithelium, pool1.CNhs13199.10252-104B98.74
Ileum epithelium, pool2.CNhs13232.10253-104C18.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.22
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G851.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H130.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H341.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G925.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H243.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H447.09
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.05
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.72
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C313.15
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.85
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.62
Mouse Schwann, donor1.CNhs12507.11728-123D94.09
Mouse Schwann, donor2.CNhs12573.11746-123F96.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C513.01
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I110.61
adrenal gland, embryo E18.CNhs11026.1262-18F57.84
adrenal gland, neonate N00.CNhs11191.1311-23C111.88
adrenal gland, neonate N25.CNhs11223.1377-27I34.65
amnion, adult pregnant day17.5.CNhs10488.583-22A88.65
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G223.88
bone (os femoris), neonate N02.CNhs11227.1985-43F512.29
bone (os femoris), neonate N16.CNhs11225.1525-43A613.69
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H722.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.39
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F110.93
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.56
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C613.53
eyeball, embryo E14.CNhs10521.399-16E213.10
eyeball, embryo E15.CNhs10593.426-16C913.32
eyeball, embryo E17.CNhs11023.1261-18D413.41
eyeball, neonate N00.CNhs11207.633-15C616.74
eyeball, neonate N01.CNhs11140.1532-43E714.86
eyeball, neonate N02.CNhs11205.1551-44G813.68
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E212.29
forelimb, embryo E12.CNhs10600.359-14H217.21
forelimb, embryo E13.CNhs10589.384-1E219.88
forelimb, embryo E14.CNhs10577.413-26A813.81
forelimb, embryo E15.CNhs11007.437-20E714.18
forelimb, embryo E17.CNhs10598.1517-43C417.06
forelimb, embryo E18.CNhs11008.1520-43B515.85
gonad, embryo E13.CNhs11044.1564-45I615.92
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.69
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E913.26
heart, embryo E12.CNhs11015.353-12F513.13
heart, embryo E13.CNhs11013.376-3I910.98
heart, embryo E14.CNhs10597.403-26D410.18
heart, embryo E15.CNhs11017.431-16C89.64
heart, embryo E16.CNhs11021.457-17C68.79
heart, embryo E17.CNhs11025.479-18E511.39
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E36.66
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G18.54
heart, neonate N16.CNhs11209.782-15G18.51
heart, neonate N20.CNhs11127.821-26I68.33
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D28.32
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G114.61
intestinal mucosa, adult.CNhs10506.860-29I337.01
intestine, adult.CNhs10496.178-9A314.81
intestine, embryo E12.CNhs11019.1251-16I510.88
intestine, embryo E13.CNhs11010.381-16D516.02
intestine, embryo E15.CNhs10602.976-16D813.40
intestine, embryo E16.CNhs10585.463-22H413.11
intestine, embryo E17.CNhs10582.482-18D320.90
intestine, embryo E18.CNhs10526.1289-20F719.40
intestine, neonate N00.CNhs11126.644-26D115.66
intestine, neonate N01.CNhs11192.1322-23E912.85
intestine, neonate N06.CNhs11102.688-20B820.36
intestine, neonate N07.CNhs11095.720-20F216.51
intestine, neonate N10.CNhs11098.755-23A519.30
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E322.05
intestine, neonate N30.CNhs11131.1384-42G118.12
kidney, embryo E14.CNhs10606.411-4I98.35
kidney, embryo E15.CNhs10997.434-16F813.02
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I210.79
kidney, embryo E18.CNhs11001.1288-20C710.67
kidney, neonate N00.CNhs11214.646-21G710.80
kidney, neonate N10.CNhs11206.758-6D510.12
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H14.32
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F810.68
liver, embryo E13.CNhs10524.378-3H611.60
liver, embryo E14.CNhs10594.409-16E112.37
liver, embryo E15.CNhs10520.433-16D712.58
liver, embryo E16.CNhs10523.462-17F510.61
liver, embryo E17.CNhs10510.481-18A314.26
liver, embryo E18.CNhs10579.499-43G415.82
liver, neonate N00.CNhs11117.641-24F412.81
liver, neonate N03.CNhs11123.1345-25G28.51
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B111.82
lung, embryo E12.CNhs10522.354-16G212.32
lung, embryo E14.CNhs10604.404-26F812.06
lung, embryo E15.CNhs11020.432-17C511.54
lung, embryo E16.CNhs10998.458-17B613.38
lung, embryo E17.CNhs10605.480-44A612.40
lung, embryo E18.CNhs10583.1287-20I614.76
lung, neonate N00.CNhs11224.640-42C616.20
lung, neonate N06.CNhs11212.683-20E517.50
lung, neonate N07.CNhs11111.715-19A316.61
lung, neonate N10.CNhs11219.750-23E618.66
lung, neonate N20.CNhs11109.822-18A414.58
lung, neonate N25.CNhs11119.1359-25C714.85
lung, neonate N30.CNhs11133.1394-42H215.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.25
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.10
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D415.79
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.91
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.86
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I712.77
ovary, embryo E18.CNhs11040.505-44H712.46
ovary, neonate N00.CNhs11217.1299-22I416.29
oviduct, adult pregnant day01.CNhs10500.988-6G610.89
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F413.11
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E513.01
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I711.68
pancreas, neonate N00.CNhs11105.645-26G917.57
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E614.95
pituitary gland, embryo E13.CNhs11009.370-44C79.06
pituitary gland, embryo E14.CNhs11037.398-44A512.22
pituitary gland, embryo E15.CNhs10592.427-16B99.93
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F59.05
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G312.50
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C37.75
skin, neonate N00.CNhs11124.650-25G414.21
skin, neonate N03.CNhs11215.662-22H311.04
skin, neonate N06.CNhs11097.693-20I59.19
skin, neonate N10.CNhs11108.762-6C411.33
small intestine, neonate N16.CNhs11114.790-21I122.74
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G217.09
spleen, embryo E16.CNhs11035.461-43C119.19
spleen, embryo E18.CNhs11011.1271-21F219.26
spleen, neonate N10.CNhs11116.752-24D121.47
spleen, neonate N20.CNhs11112.824-19H116.40
spleen, neonate N25.CNhs11099.1354-25G318.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.42
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E314.08
stomach, embryo E15.CNhs10603.1252-16G814.03
stomach, embryo E16.CNhs11022.459-17D410.91
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B89.71
stomach, neonate N07.CNhs11210.718-18A910.58
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I18.30
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F513.61
testis, embryo E15.CNhs11034.443-27C59.60
testis, embryo E16.CNhs11033.470-26G513.22
testis, embryo E17.CNhs11029.486-18I512.40
testis, embryo E18.CNhs11027.503-18G512.50
testis, neonate N00.CNhs11189.1300-22B711.62
testis, neonate N07.CNhs11222.726-26I411.20
testis, neonate N10.CNhs11204.763-44D99.86
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B520.54
thymus, embryo E14.CNhs11041.402-44I413.79
thymus, embryo E15.CNhs11005.430-45I213.15
thymus, embryo E16.CNhs11002.456-26C511.95
thymus, embryo E17.CNhs10581.478-18C114.32
thymus, embryo E18.CNhs10595.1273-19G416.29
thymus, neonate N02.CNhs11181.1541-43F816.59
thymus, neonate N03.CNhs11137.2104-43C715.66
thymus, neonate N06.CNhs11197.681-26C415.65
thymus, neonate N07.CNhs11211.713-19D316.61
thymus, neonate N10.CNhs11194.748-24E415.73
thymus, neonate N20.CNhs11186.820-7A216.96
thymus, neonate N25.CNhs11125.1362-25G717.51
thymus, neonate N30.CNhs11132.1393-42G218.23
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F724.85
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G523.17
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F513.70
uterus, adult.CNhs10509.92-27E511.17
vagina, adult.CNhs10502.89-27D59.43
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I819.72
whole body, embryo E12.CNhs10587.857-27C919.15
whole body, embryo E13.CNhs10512.372-23H213.83
whole body, embryo E14.5.CNhs10578.420-27D211.91
whole body, embryo E14.CNhs10519.395-14B114.04
whole body, embryo E16.CNhs10514.453-14F213.79
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.63
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.14
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.01
whole body, embryo E17.5.CNhs10513.490-9F913.50
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B313.33
whole body, neonate N00.CNhs10525.657-19C212.25
whole body, neonate N01.CNhs10576.659-23C613.01
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B410.20





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system7.29e-0747







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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