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FFCP PHASE1:Mm9::chr3:31048856..31048880,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18417|HGNC=|MCL_coexpression_id=2045|UniProt=Q60771|association_with_transcript=0bp_to_ENSMUST00000046174_5end|description=CAGE_peak_1_at_Cldn11_5end|id=chr3:31048856..31048880,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.89e-22!102;UBERON:0000924!1.89e-22!102;UBERON:0006601!1.89e-22!102;UBERON:0002346!3.17e-21!71;UBERON:0003075!3.17e-21!71;UBERON:0007284!3.17e-21!71;UBERON:0000073!1.07e-19!75;UBERON:0001016!1.07e-19!75;UBERON:0001017!1.59e-19!73;UBERON:0005743!1.59e-19!73;UBERON:0000033!2.23e-19!63;UBERON:0001049!7.07e-18!52;UBERON:0005068!7.07e-18!52;UBERON:0006241!7.07e-18!52;UBERON:0007135!7.07e-18!52;UBERON:0000955!3.35e-17!50;UBERON:0006238!3.35e-17!50;UBERON:0002616!9.94e-17!49;UBERON:0003056!3.27e-14!49;UBERON:0003080!3.16e-12!40;UBERON:0002780!1.13e-11!39;UBERON:0001890!1.13e-11!39;UBERON:0006240!1.13e-11!39;UBERON:0002020!3.23e-09!34;UBERON:0000153!2.13e-08!94;UBERON:0007811!2.51e-08!86;UBERON:0002791!3.68e-07!29;UBERON:0003528!3.68e-07!29;UBERON:0001893!3.68e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.66e-19,54;UBERON:0010314,8.78e-19,92;UBERON:0001016,1.33e-18,75;UBERON:0002346,1.56e-18,64;UBERON:0003075,1.56e-18,64;UBERON:0007284,1.56e-18,64;UBERON:0001017,2.08e-18,73;UBERON:0004121,2.52e-18,95;UBERON:0000924,2.52e-18,95;UBERON:0006601,2.52e-18,95;UBERON:0001049,3.62e-18,52;UBERON:0005068,3.62e-18,52;UBERON:0006241,3.62e-18,52;UBERON:0007135,3.62e-18,52;UBERON:0010371,2.04e-16,73;UBERON:0000955,1.81e-15,47;UBERON:0006238,1.81e-15,47;UBERON:0002616,5.43e-15,46;UBERON:0003056,2.23e-14,49;UBERON:0003080,2.68e-12,40;UBERON:0002780,1.01e-11,39;UBERON:0001890,1.01e-11,39;UBERON:0006240,1.01e-11,39;UBERON:0002020,3.46e-09,34;UBERON:0003528,4.58e-07,29;UBERON:0002791,4.58e-07,29;UBERON:0001893,4.58e-07,29;UBERON:0003076,6.74e-07,12;UBERON:0003057,6.74e-07,12|phase1_expression=65.6610273129655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.412878882186,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1760.38052478309,1.09012578190223,1.5378032791413,1.36100929351998,749.627287803816,17.2503077237966,0,0,0,1.54355661621568,15.4728057566929,2.06268836910977,2.22548106945558,2.64495489636016,15.2119536841483,133.843590167307,761.236345471135,0,4.94433181283487,0,333.155322896466,408.424058556812,9.7468235569969,4.86021377994086,6.52007380189284,415.33653132313,429.147575068985,0.244981598429908,1.34183659425531,1.83843757322004,485.611035207304,328.156458878932,361.89699235171,2.63772575460388,5.58074625974699,14.5855743755893,474.331915303346,323.588500768216,381.842821194248,78.9604609069429,47.8368847484986,9.69277118291563,2.72614295999463,12.0914496170857,4.34796733052517,0,0,1.61910957491345,0,0,14.6062196937022,0,0,0,16.6195235336483,0,0,0,0,0,0,14.6155366040397,8.02707439306232,17.6646145487141,27.4106816290495,40.4939086155148,32.2861696158482,26.6779073778142,13.9930561491489,6.91166252313215,8.65182387070309,0.144599356919912,0,1.29413479957927,0,0.484875253135222,0,94.5681974347297,236.255885285577,0,0,0,0,280.707658244638,327.570431618137,0.376963056338593,136.799739991322,240.11681443318,297.76026785385,688.389679196496,32.1812389766999,13.8091737377203,14.4051972307195,10.1012090825508,32.0096289688251,24.5995251743816,15.48534316326,10.8507468841715,4.35433594568498,8.07116437794554,8.33945348581587,102.44653481265,0.431135985865684,2.64748512234947,4.92663147659057,7.89104636739269,5.28289773528636,1.74126083261083,2.26360350048738,20.3014952154863,0,0,0,2.48550927042602,4.45599513964083,5.04173772090842,3.31442629819294,3.73852040320067,4.78228049950873,3.72054311600653,3.21928081679543,1.75148013550754,4.27855609775049,2.95501435342371,1.54030738137126,1.16959989940266,0.658650345873152,0.268412837520744,163.605579982891,11.3195073617213,0.660837565967596,0,2.77274725695804,6.0381534683714,1.80414445850931,1.00841762311671,1.77902435075896,0.380451252225118,0,0.988193728344065,1.00534083520108,1.39269530428806,1.55971269695296,0,0.216138049874694,0,34.5195579734609,27.3053945137252,43.9560169125014,46.025200093041,37.4328300233518,25.3891668002953,28.5829147801643,5.90440591918409,3.29697328466887,1.85095745882701,0,0.500535317148282,0.786235980452812,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,0.739012760666419,8.14813070613084,2.60743962307241,1.01847051465113,1.40814148973101,1.84256883185997,1.6663054862021,0.195133647857799,0.788175720530955,1.55025282754142,0.797273843287435,0.983179888294428,1.38147985492716,1.01254341007058,0,0,0,0.827810238914197,423.532456387795,1171.17917242929,0,0.504941854408746,0.94652465824877,0.780877488593277,1.72338718186239,0.716906393857656,1.33679204449436,1.41538265394416,0.404810701674894,1.16902343164525,0.790575555893047,75.1891880427029,4.82596289708113,12.6426578603751,7.00413925220377,1.15479086080775,0,4.37005145078967,4.8371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|EntrezGene=18417
|HGNC=
|MCL_coexpression_id=2045
|UniProt=Q60771
|association_with_transcript=0bp_to_ENSMUST00000046174_5end
|description=CAGE_peak_1_at_Cldn11_5end
|id=chr3:31048856..31048880,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.89e-22!102;UBERON:0000924!1.89e-22!102;UBERON:0006601!1.89e-22!102;UBERON:0002346!3.17e-21!71;UBERON:0003075!3.17e-21!71;UBERON:0007284!3.17e-21!71;UBERON:0000073!1.07e-19!75;UBERON:0001016!1.07e-19!75;UBERON:0001017!1.59e-19!73;UBERON:0005743!1.59e-19!73;UBERON:0000033!2.23e-19!63;UBERON:0001049!7.07e-18!52;UBERON:0005068!7.07e-18!52;UBERON:0006241!7.07e-18!52;UBERON:0007135!7.07e-18!52;UBERON:0000955!3.35e-17!50;UBERON:0006238!3.35e-17!50;UBERON:0002616!9.94e-17!49;UBERON:0003056!3.27e-14!49;UBERON:0003080!3.16e-12!40;UBERON:0002780!1.13e-11!39;UBERON:0001890!1.13e-11!39;UBERON:0006240!1.13e-11!39;UBERON:0002020!3.23e-09!34;UBERON:0000153!2.13e-08!94;UBERON:0007811!2.51e-08!86;UBERON:0002791!3.68e-07!29;UBERON:0003528!3.68e-07!29;UBERON:0001893!3.68e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.66e-19,54;UBERON:0010314,8.78e-19,92;UBERON:0001016,1.33e-18,75;UBERON:0002346,1.56e-18,64;UBERON:0003075,1.56e-18,64;UBERON:0007284,1.56e-18,64;UBERON:0001017,2.08e-18,73;UBERON:0004121,2.52e-18,95;UBERON:0000924,2.52e-18,95;UBERON:0006601,2.52e-18,95;UBERON:0001049,3.62e-18,52;UBERON:0005068,3.62e-18,52;UBERON:0006241,3.62e-18,52;UBERON:0007135,3.62e-18,52;UBERON:0010371,2.04e-16,73;UBERON:0000955,1.81e-15,47;UBERON:0006238,1.81e-15,47;UBERON:0002616,5.43e-15,46;UBERON:0003056,2.23e-14,49;UBERON:0003080,2.68e-12,40;UBERON:0002780,1.01e-11,39;UBERON:0001890,1.01e-11,39;UBERON:0006240,1.01e-11,39;UBERON:0002020,3.46e-09,34;UBERON:0003528,4.58e-07,29;UBERON:0002791,4.58e-07,29;UBERON:0001893,4.58e-07,29;UBERON:0003076,6.74e-07,12;UBERON:0003057,6.74e-07,12
|phase1_expression=65.6610273129655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.412878882186,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1760.38052478309,1.09012578190223,1.5378032791413,1.36100929351998,749.627287803816,17.2503077237966,0,0,0,1.54355661621568,15.4728057566929,2.06268836910977,2.22548106945558,2.64495489636016,15.2119536841483,133.843590167307,761.236345471135,0,4.94433181283487,0,333.155322896466,408.424058556812,9.7468235569969,4.86021377994086,6.52007380189284,415.33653132313,429.147575068985,0.244981598429908,1.34183659425531,1.83843757322004,485.611035207304,328.156458878932,361.89699235171,2.63772575460388,5.58074625974699,14.5855743755893,474.331915303346,323.588500768216,381.842821194248,78.9604609069429,47.8368847484986,9.69277118291563,2.72614295999463,12.0914496170857,4.34796733052517,0,0,1.61910957491345,0,0,14.6062196937022,0,0,0,16.6195235336483,0,0,0,0,0,0,14.6155366040397,8.02707439306232,17.6646145487141,27.4106816290495,40.4939086155148,32.2861696158482,26.6779073778142,13.9930561491489,6.91166252313215,8.65182387070309,0.144599356919912,0,1.29413479957927,0,0.484875253135222,0,94.5681974347297,236.255885285577,0,0,0,0,280.707658244638,327.570431618137,0.376963056338593,136.799739991322,240.11681443318,297.76026785385,688.389679196496,32.1812389766999,13.8091737377203,14.4051972307195,10.1012090825508,32.0096289688251,24.5995251743816,15.48534316326,10.8507468841715,4.35433594568498,8.07116437794554,8.33945348581587,102.44653481265,0.431135985865684,2.64748512234947,4.92663147659057,7.89104636739269,5.28289773528636,1.74126083261083,2.26360350048738,20.3014952154863,0,0,0,2.48550927042602,4.45599513964083,5.04173772090842,3.31442629819294,3.73852040320067,4.78228049950873,3.72054311600653,3.21928081679543,1.75148013550754,4.27855609775049,2.95501435342371,1.54030738137126,1.16959989940266,0.658650345873152,0.268412837520744,163.605579982891,11.3195073617213,0.660837565967596,0,2.77274725695804,6.0381534683714,1.80414445850931,1.00841762311671,1.77902435075896,0.380451252225118,0,0.988193728344065,1.00534083520108,1.39269530428806,1.55971269695296,0,0.216138049874694,0,34.5195579734609,27.3053945137252,43.9560169125014,46.025200093041,37.4328300233518,25.3891668002953,28.5829147801643,5.90440591918409,3.29697328466887,1.85095745882701,0,0.500535317148282,0.786235980452812,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0.179397413521912,0,0.739012760666419,8.14813070613084,2.60743962307241,1.01847051465113,1.40814148973101,1.84256883185997,1.6663054862021,0.195133647857799,0.788175720530955,1.55025282754142,0.797273843287435,0.983179888294428,1.38147985492716,1.01254341007058,0,0,0,0.827810238914197,423.532456387795,1171.17917242929,0,0.504941854408746,0.94652465824877,0.780877488593277,1.72338718186239,0.716906393857656,1.33679204449436,1.41538265394416,0.404810701674894,1.16902343164525,0.790575555893047,75.1891880427029,4.82596289708113,12.6426578603751,7.00413925220377,1.15479086080775,0,4.37005145078967,4.83717691143602,3.58349651536206,5.61073596473468,2.15204603560749,3.10113951801865,1.45413491791002,1.78248689192361,0.948110273807448,0,0,9.87274856685985,19.0864759673189,98.9593930938072,164.825179939294,216.709765510858,292.168123232192,228.229491575142,155.277124048446,5.39744928546534,52.1106894324998,0.220528398054962,0.32977250588296,2.09903754704677,1.5078231232039,1.90995750405018,1.47726809770555,1.7488850197791,574.447585628559,0,2.06386867963222,1.11116716421827,0.188368457004691,0,0,0,0,0,0.954670618015114,1.10717597753397,2.23651413839534,1.51207477150522,0.627264888043406,0.436725127492355,0.134864346384821,1.23980183588004,0.523511883968059,0.518459893167171,1.86401793926078,68.206845580787,22.4274819065968,21.6750622498798,10.8892665472667,12.7868225242954,11.9958849098453,13.4960824442617,77.7320177518382,342.365759549946,196.649474352369,125.293052722171,0.316011120628178,3.44632865993279,1.84879722896689,0.389762468933385,1.07416017400489,0.39736270956253,0.120195449519969,0.443068581523732,0.100966449948148,0,0.302478555410522,0.0974578807397524,0,0.233753804363138,0.453460767230423,0,0,0,1.54551675225752,29.2784661703844,1.46521299413812,0.214368379079066,0,166.037041729418,179.526842237799,209.679757918819,109.98603669996,190.452940496239,171.474414707462,167.405580057488,75.2036409384448,87.0033425249673,55.4003533574447,2.69847103718859,6.78342284781753,19.4636310559713,12.8846560046196,7.54607385460736,6.80220981265052,9.33436256766784,7.0051919461224,12.8367683836726,11.3713745293709,11.660047794951,10.7517014590063,7.86588662747012,7.04276676453562,8.61532034334199,7.1444053692461,8.45955579397445,7.13764115715709,7.82963211526283,9.86232764900462,9.60033906679163,8.34136288948886,9.0605752179982,8.86613141457204,8.56395361779509,8.20761696549262,7.13419094203813,7.3659519202596,7.87663860305998,10.661703161497,7.59264115994714,7.88035859004508,7.7753898202241,10.2258315182738,12.5389297137742,27.229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|short_description=p1@Cldn11
}}

Revision as of 02:05, 14 September 2013

Short description:p1@Cldn11
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cldn11_5end
Coexpression cluster:MCL_coexpression_mm9:2045
Association with transcript: 0bp_to_ENSMUST00000046174_5end
EntrezGene:Cldn11
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cldn11

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G765.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A374.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71760.38
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C4749.63
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6133.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1761.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C8333.16
Mouse Microglia, donor2.CNhs12634.11736-123E8408.42
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1415.34
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5429.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3485.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3328.16
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7361.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.64
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4474.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5323.59
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6381.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D678.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F647.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D92.73
Mouse Schwann, donor2.CNhs12573.11746-123F912.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A714.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.62
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.62
accessory axillary lymph node, adult.CNhs10475.1063-29H98.03
adrenal gland, adult.CNhs10508.49-24D717.66
adrenal gland, embryo E14.CNhs11038.406-44C527.41
adrenal gland, embryo E16.CNhs11004.1254-43D640.49
adrenal gland, embryo E17.CNhs11043.1263-45I132.29
adrenal gland, embryo E18.CNhs11026.1262-18F526.68
adrenal gland, neonate N00.CNhs11191.1311-23C113.99
adrenal gland, neonate N25.CNhs11223.1377-27I36.91
amnion, adult pregnant day17.5.CNhs10488.583-22A88.65
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B294.57
cerebellum, neonate N30.CNhs11135.1395-42I2236.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4280.71
corpus striatum, adult.CNhs10487.19-21D8327.57
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D5136.80
cortex, neonate N30.CNhs11107.1392-42F2240.12
diencephalon, adult.CNhs10482.20-12F2297.76
diencephalon, neonate N30.CNhs11201.1388-42B2688.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B132.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.81
epididymis, adult.CNhs10490.58-23B214.41
eyeball, adult.CNhs10484.31-12G410.10
eyeball, embryo E12.CNhs11016.345-16C632.01
eyeball, embryo E14.CNhs10521.399-16E224.60
eyeball, embryo E15.CNhs10593.426-16C915.49
eyeball, embryo E17.CNhs11023.1261-18D410.85
eyeball, neonate N00.CNhs11207.633-15C64.35
eyeball, neonate N01.CNhs11140.1532-43E78.07
eyeball, neonate N02.CNhs11205.1551-44G88.34
eyeball, neonate N16.CNhs11188.777-19A2102.45
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I620.30
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E8163.61
hippocampus, neonate N00.CNhs11228.627-43G111.32
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I934.52
kidney, embryo E15.CNhs10997.434-16F827.31
kidney, embryo E16.CNhs10584.464-22A543.96
kidney, embryo E17.CNhs11028.483-18I246.03
kidney, embryo E18.CNhs11001.1288-20C737.43
kidney, neonate N00.CNhs11214.646-21G725.39
kidney, neonate N10.CNhs11206.758-6D528.58
kidney, neonate N20.CNhs11113.832-19I15.90
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G28.15
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C2423.53
medulla oblongata, neonate N30.CNhs11200.1396-42A31171.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I975.19
ovary, adult.CNhs10507.91-2I74.83
ovary, embryo E18.CNhs11040.505-44H712.64
ovary, neonate N00.CNhs11217.1299-22I47.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E619.09
pituitary gland, embryo E13.CNhs11009.370-44C798.96
pituitary gland, embryo E14.CNhs11037.398-44A5164.83
pituitary gland, embryo E15.CNhs10592.427-16B9216.71
pituitary gland, embryo E16.CNhs11036.449-43F6292.17
pituitary gland, embryo E17.CNhs11039.1265-44F5228.23
pituitary gland, neonate N00.CNhs11190.1308-22E9155.28
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G352.11
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.51
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C9574.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G568.21
testis, embryo E13.CNhs11031.389-23F522.43
testis, embryo E15.CNhs11034.443-27C521.68
testis, embryo E16.CNhs11033.470-26G510.89
testis, embryo E17.CNhs11029.486-18I512.79
testis, embryo E18.CNhs11027.503-18G512.00
testis, neonate N00.CNhs11189.1300-22B713.50
testis, neonate N07.CNhs11222.726-26I477.73
testis, neonate N10.CNhs11204.763-44D9342.37
testis, neonate N20.CNhs11110.839-18H3196.65
testis, neonate N30.CNhs11130.1391-42E2125.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F529.28
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1166.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2179.53
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3209.68
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7109.99
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4190.45
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5171.47
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6167.41
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A775.20
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A887.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A955.40
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H219.46
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B17.55
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.84
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.21
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F912.54
whole body, embryo E17.CNhs10517.475-3I527.23
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C210.96
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D124.27
whole body, neonate N10.CNhs10518.761-6B432.69





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.66e-1954
structure with developmental contribution from neural crest8.78e-1992
nervous system1.33e-1875
neurectoderm1.56e-1864
neural plate1.56e-1864
presumptive neural plate1.56e-1864
central nervous system2.08e-1873
ectoderm-derived structure2.52e-1895
ectoderm2.52e-1895
presumptive ectoderm2.52e-1895
neural tube3.62e-1852
neural rod3.62e-1852
future spinal cord3.62e-1852
neural keel3.62e-1852
ecto-epithelium2.04e-1673
brain1.81e-1547
future brain1.81e-1547
regional part of brain5.43e-1546
pre-chordal neural plate2.23e-1449
anterior neural tube2.68e-1240
regional part of forebrain1.01e-1139
forebrain1.01e-1139
future forebrain1.01e-1139
gray matter3.46e-0934
brain grey matter4.58e-0729
regional part of telencephalon4.58e-0729
telencephalon4.58e-0729
posterior neural tube6.74e-0712
chordal neural plate6.74e-0712







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