FFCP PHASE1:Mm9::chr7:31092380..31092397,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:31092380..31092397,+|id=chr7:31092380..31092397,+|ontology_enrichment_celltype=CL:0000393!5.68e-12!39;CL:0000211!5.68e-12!39;CL:0000540!9.82e-12!33;CL:0000047!9.82e-12!33;CL:0000031!9.82e-12!33;CL:0000404!9.82e-12!33;CL:0000117!1.90e-11!23;CL:0000337!1.90e-11!23;CL:0002319!6.09e-11!43;CL:0000055!6.55e-11!50;CL:0000221!1.99e-10!44;CL:0000133!1.99e-10!44|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-11,23;CL:0000337,4.54e-11,23;CL:0002610,4.63e-08,3;CL:0002614,5.92e-08,3;CL:0000540,1.61e-07,33;CL:0000047,1.61e-07,33;CL:0000031,1.61e-07,33;CL:0000404,1.61e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.18e-22!75;UBERON:0001016!2.18e-22!75;UBERON:0001017!3.38e-22!73;UBERON:0005743!3.38e-22!73;UBERON:0004121!1.80e-20!102;UBERON:0000924!1.80e-20!102;UBERON:0006601!1.80e-20!102;UBERON:0002346!3.54e-18!71;UBERON:0003075!3.54e-18!71;UBERON:0007284!3.54e-18!71;UBERON:0001049!9.18e-18!52;UBERON:0005068!9.18e-18!52;UBERON:0006241!9.18e-18!52;UBERON:0007135!9.18e-18!52;UBERON:0000955!3.31e-17!50;UBERON:0006238!3.31e-17!50;UBERON:0000033!7.07e-17!63;UBERON:0002616!2.20e-16!49;UBERON:0003056!5.30e-15!49;UBERON:0002020!2.23e-14!34;UBERON:0003080!4.78e-13!40;UBERON:0002780!1.26e-12!39;UBERON:0001890!1.26e-12!39;UBERON:0006240!1.26e-12!39;UBERON:0002791!1.58e-11!29;UBERON:0003528!1.58e-11!29;UBERON:0001893!1.58e-11!29;UBERON:0000956!1.63e-09!21;UBERON:0001869!1.63e-09!21;UBERON:0000203!1.63e-09!21;UBERON:0000153!1.26e-08!94;UBERON:0002619!2.02e-08!17;UBERON:0007811!2.79e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.63e-18,54;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0000955,1.54e-15,47;UBERON:0006238,1.54e-15,47;UBERON:0002619,1.88e-15,17;UBERON:0002020,6.29e-15,34;UBERON:0003528,2.60e-14,29;UBERON:0002791,2.60e-14,29;UBERON:0001893,2.60e-14,29;UBERON:0001049,7.87e-14,52;UBERON:0005068,7.87e-14,52;UBERON:0006241,7.87e-14,52;UBERON:0007135,7.87e-14,52;UBERON:0002021,9.36e-14,10;UBERON:0000411,9.36e-14,10;UBERON:0001950,9.36e-14,10;UBERON:0002616,3.24e-13,46;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0000956,2.15e-12,21;UBERON:0001869,2.15e-12,21;UBERON:0000203,2.15e-12,21;UBERON:0002346,6.16e-11,64;UBERON:0003075,6.16e-11,64;UBERON:0007284,6.16e-11,64;UBERON:0002780,2.28e-10,39;UBERON:0001890,2.28e-10,39;UBERON:0006240,2.28e-10,39;UBERON:0003080,4.42e-10,40;UBERON:0010371,2.19e-09,73;UBERON:0004684,4.63e-08,3;UBERON:0002275,4.63e-08,3;UBERON:0003056,5.01e-08,49;UBERON:0002038,5.92e-08,3;UBERON:0009663,5.92e-08,3;UBERON:0009661,5.92e-08,3;UBERON:0000125,5.92e-08,3;UBERON:0002308,5.92e-08,3;UBERON:0010314,4.24e-07,92;UBERON:0002037,9.62e-07,4;UBERON:0002680,9.62e-07,4;UBERON:0001895,9.62e-07,4;UBERON:0010092,9.62e-07,4;UBERON:0006215,9.62e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.404632921719196,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.540023753326763,0.420649922702764,0.571301968807607,0.441737081903227,0.367472397644862,0.670918297127655,1.83843757322004,0,1.14918604276669,1.0752457327937,0.131886287730194,0.914876436024097,0,1.11673199600552,0,1.06958773443767,1.17851434189467,0.427115042397309,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0,0,0,1.46390398505774,10.0534419270458,0,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.281105173679186,0.258703370739016,0.646703978798527,0,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,1.23485534855141,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0,0.189667900953082,0,0,0,0.193952487167626,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0.809621403349789,0.876767573733936,0.395287777946524,1.60660658210904,0,0.534196811001766,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:31092380..31092397,+ | |||
|id=chr7:31092380..31092397,+ | |||
|ontology_enrichment_celltype=CL:0000393!5.68e-12!39;CL:0000211!5.68e-12!39;CL:0000540!9.82e-12!33;CL:0000047!9.82e-12!33;CL:0000031!9.82e-12!33;CL:0000404!9.82e-12!33;CL:0000117!1.90e-11!23;CL:0000337!1.90e-11!23;CL:0002319!6.09e-11!43;CL:0000055!6.55e-11!50;CL:0000221!1.99e-10!44;CL:0000133!1.99e-10!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.54e-11,23;CL:0000337,4.54e-11,23;CL:0002610,4.63e-08,3;CL:0002614,5.92e-08,3;CL:0000540,1.61e-07,33;CL:0000047,1.61e-07,33;CL:0000031,1.61e-07,33;CL:0000404,1.61e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.18e-22!75;UBERON:0001016!2.18e-22!75;UBERON:0001017!3.38e-22!73;UBERON:0005743!3.38e-22!73;UBERON:0004121!1.80e-20!102;UBERON:0000924!1.80e-20!102;UBERON:0006601!1.80e-20!102;UBERON:0002346!3.54e-18!71;UBERON:0003075!3.54e-18!71;UBERON:0007284!3.54e-18!71;UBERON:0001049!9.18e-18!52;UBERON:0005068!9.18e-18!52;UBERON:0006241!9.18e-18!52;UBERON:0007135!9.18e-18!52;UBERON:0000955!3.31e-17!50;UBERON:0006238!3.31e-17!50;UBERON:0000033!7.07e-17!63;UBERON:0002616!2.20e-16!49;UBERON:0003056!5.30e-15!49;UBERON:0002020!2.23e-14!34;UBERON:0003080!4.78e-13!40;UBERON:0002780!1.26e-12!39;UBERON:0001890!1.26e-12!39;UBERON:0006240!1.26e-12!39;UBERON:0002791!1.58e-11!29;UBERON:0003528!1.58e-11!29;UBERON:0001893!1.58e-11!29;UBERON:0000956!1.63e-09!21;UBERON:0001869!1.63e-09!21;UBERON:0000203!1.63e-09!21;UBERON:0000153!1.26e-08!94;UBERON:0002619!2.02e-08!17;UBERON:0007811!2.79e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.63e-18,54;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0000955,1.54e-15,47;UBERON:0006238,1.54e-15,47;UBERON:0002619,1.88e-15,17;UBERON:0002020,6.29e-15,34;UBERON:0003528,2.60e-14,29;UBERON:0002791,2.60e-14,29;UBERON:0001893,2.60e-14,29;UBERON:0001049,7.87e-14,52;UBERON:0005068,7.87e-14,52;UBERON:0006241,7.87e-14,52;UBERON:0007135,7.87e-14,52;UBERON:0002021,9.36e-14,10;UBERON:0000411,9.36e-14,10;UBERON:0001950,9.36e-14,10;UBERON:0002616,3.24e-13,46;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0000956,2.15e-12,21;UBERON:0001869,2.15e-12,21;UBERON:0000203,2.15e-12,21;UBERON:0002346,6.16e-11,64;UBERON:0003075,6.16e-11,64;UBERON:0007284,6.16e-11,64;UBERON:0002780,2.28e-10,39;UBERON:0001890,2.28e-10,39;UBERON:0006240,2.28e-10,39;UBERON:0003080,4.42e-10,40;UBERON:0010371,2.19e-09,73;UBERON:0004684,4.63e-08,3;UBERON:0002275,4.63e-08,3;UBERON:0003056,5.01e-08,49;UBERON:0002038,5.92e-08,3;UBERON:0009663,5.92e-08,3;UBERON:0009661,5.92e-08,3;UBERON:0000125,5.92e-08,3;UBERON:0002308,5.92e-08,3;UBERON:0010314,4.24e-07,92;UBERON:0002037,9.62e-07,4;UBERON:0002680,9.62e-07,4;UBERON:0001895,9.62e-07,4;UBERON:0010092,9.62e-07,4;UBERON:0006215,9.62e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.404632921719196,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.540023753326763,0.420649922702764,0.571301968807607,0.441737081903227,0.367472397644862,0.670918297127655,1.83843757322004,0,1.14918604276669,1.0752457327937,0.131886287730194,0.914876436024097,0,1.11673199600552,0,1.06958773443767,1.17851434189467,0.427115042397309,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0,0,0,1.46390398505774,10.0534419270458,0,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,0,0.511430914660661,0.41557608911912,0.324482526135515,0.305518091550949,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.281105173679186,0.258703370739016,0.646703978798527,0,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,1.23485534855141,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0,0.189667900953082,0,0,0,0.193952487167626,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0.809621403349789,0.876767573733936,0.395287777946524,1.60660658210904,0,0.534196811001766,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.329098041204242,0.608929898229199,0,0,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0.299033092087958,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0.428736758158132,0,1.12950368523413,0.460325236507177,0,1.20297227640581,2.74033007908257,0.755393897389701,0.675022500231806,0,1.35942722695261,1.03552062350364,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr7:31092380..31092397,+ | |||
}} |
Revision as of 13:11, 14 September 2013
Short description: | p@chr7:31092380..31092397, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:31092380..31092397, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.54e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.54e-11 | 23 |
raphe nuclei neuron | 4.63e-08 | 3 |
neuron of the substantia nigra | 5.92e-08 | 3 |
neuron | 1.61e-07 | 33 |
neuronal stem cell | 1.61e-07 | 33 |
neuroblast | 1.61e-07 | 33 |
electrically signaling cell | 1.61e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.