FFCP PHASE1:Mm9::chr10:89208540..89208552,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:89208540..89208552,-|id=chr10:89208540..89208552,-|ontology_enrichment_celltype=CL:0000838!1.64e-10!12;CL:0000791!3.99e-10!9;CL:0000789!3.99e-10!9;CL:0002420!3.99e-10!9;CL:0002419!3.99e-10!9;CL:0000790!3.99e-10!9;CL:0000084!1.78e-09!11;CL:0000827!1.78e-09!11;CL:0000542!1.85e-09!13;CL:0000051!1.85e-09!13;CL:0000355!2.13e-09!9;CL:0000624!5.15e-09!8;CL:0002320!1.49e-08!46;CL:0000134!1.49e-08!46;CL:0000988!1.95e-08!32;CL:0002032!1.95e-08!32;CL:0000037!1.95e-08!32;CL:0000566!1.95e-08!32;CL:0000837!1.95e-08!32;CL:0000738!7.14e-08!17;CL:0002087!7.14e-08!17;CL:0000034!2.17e-07!97;CL:0000893!4.25e-07!6;CL:0002489!4.25e-07!6;CL:0000898!4.25e-07!6;CL:0000809!4.25e-07!6;CL:0000810!4.25e-07!6;CL:0000895!4.25e-07!6;CL:0000808!4.25e-07!6;CL:0000894!4.25e-07!6;CL:0000806!4.25e-07!6;CL:0000807!4.25e-07!6;CL:0000805!4.25e-07!6;CL:0002425!4.25e-07!6;CL:0002436!4.25e-07!6;CL:0002427!4.25e-07!6;CL:0002428!4.25e-07!6;CL:0002429!4.25e-07!6;CL:0002433!4.25e-07!6;CL:0002431!4.25e-07!6;CL:0002432!4.25e-07!6;CL:0000219!4.71e-07!54|ontology_enrichment_celltype_v019_2=CL:0000988,1.86e-09,32;CL:0002032,1.86e-09,32;CL:0000037,1.86e-09,32;CL:0000837,1.86e-09,32;CL:0000034,1.43e-08,97;CL:0002320,6.22e-08,46;CL:0000134,6.22e-08,46;CL:0000049,9.51e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.23e-08,3;DOID:4045,2.23e-08,3|ontology_enrichment_uberon=UBERON:0002329!1.22e-10!11;UBERON:0003077!1.22e-10!11;UBERON:0003059!1.22e-10!11;UBERON:0007282!1.22e-10!11;UBERON:0009618!1.22e-10!11;UBERON:0007285!1.22e-10!11;UBERON:0000383!3.77e-10!10;UBERON:0000914!6.94e-10!17;UBERON:0001134!2.13e-09!9;UBERON:0002036!2.13e-09!9;UBERON:0002385!2.13e-09!9;UBERON:0000486!2.13e-09!9;UBERON:0001015!2.13e-09!9;UBERON:0004290!2.13e-09!9;UBERON:0003082!2.13e-09!9;UBERON:0002384!1.49e-08!46;UBERON:0002204!2.12e-08!32|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.22e-08,46|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0.516493293766305,3.94208422024667,2.57470978954193,0.171217968225505,0.239316476986009,0.684802919724823,0.961624426608971,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,7.95210098400125,0.7813353445238,8.37637990358077,17.0587131528994,2.73218193983378,4.85510353031154,0.125896817975577,0.101376931219515,0.550640256485045,0,0,0,0,0,0,0.838913030288682,0.725362142011344,1.68046899571232,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.302286240427142,0,0.860423876981386,1.3599426674155,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0.23517741427141,0.251333182659351,0.741584903203122,0.722996784599558,0,0,0.220841518460394,0,0,0,0,0,4.79260498023681,1.79970819298022,4.70159840170339,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0.702213187313235,1.28673953557358,4.26245249093389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,3.73952545986482,2.37917468950219,1.93479963326193,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr10:89208540..89208552,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:89208540..89208552,- | |||
|id=chr10:89208540..89208552,- | |||
|ontology_enrichment_celltype=CL:0000838!1.64e-10!12;CL:0000791!3.99e-10!9;CL:0000789!3.99e-10!9;CL:0002420!3.99e-10!9;CL:0002419!3.99e-10!9;CL:0000790!3.99e-10!9;CL:0000084!1.78e-09!11;CL:0000827!1.78e-09!11;CL:0000542!1.85e-09!13;CL:0000051!1.85e-09!13;CL:0000355!2.13e-09!9;CL:0000624!5.15e-09!8;CL:0002320!1.49e-08!46;CL:0000134!1.49e-08!46;CL:0000988!1.95e-08!32;CL:0002032!1.95e-08!32;CL:0000037!1.95e-08!32;CL:0000566!1.95e-08!32;CL:0000837!1.95e-08!32;CL:0000738!7.14e-08!17;CL:0002087!7.14e-08!17;CL:0000034!2.17e-07!97;CL:0000893!4.25e-07!6;CL:0002489!4.25e-07!6;CL:0000898!4.25e-07!6;CL:0000809!4.25e-07!6;CL:0000810!4.25e-07!6;CL:0000895!4.25e-07!6;CL:0000808!4.25e-07!6;CL:0000894!4.25e-07!6;CL:0000806!4.25e-07!6;CL:0000807!4.25e-07!6;CL:0000805!4.25e-07!6;CL:0002425!4.25e-07!6;CL:0002436!4.25e-07!6;CL:0002427!4.25e-07!6;CL:0002428!4.25e-07!6;CL:0002429!4.25e-07!6;CL:0002433!4.25e-07!6;CL:0002431!4.25e-07!6;CL:0002432!4.25e-07!6;CL:0000219!4.71e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.86e-09,32;CL:0002032,1.86e-09,32;CL:0000037,1.86e-09,32;CL:0000837,1.86e-09,32;CL:0000034,1.43e-08,97;CL:0002320,6.22e-08,46;CL:0000134,6.22e-08,46;CL:0000049,9.51e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.23e-08,3;DOID:4045,2.23e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002329!1.22e-10!11;UBERON:0003077!1.22e-10!11;UBERON:0003059!1.22e-10!11;UBERON:0007282!1.22e-10!11;UBERON:0009618!1.22e-10!11;UBERON:0007285!1.22e-10!11;UBERON:0000383!3.77e-10!10;UBERON:0000914!6.94e-10!17;UBERON:0001134!2.13e-09!9;UBERON:0002036!2.13e-09!9;UBERON:0002385!2.13e-09!9;UBERON:0000486!2.13e-09!9;UBERON:0001015!2.13e-09!9;UBERON:0004290!2.13e-09!9;UBERON:0003082!2.13e-09!9;UBERON:0002384!1.49e-08!46;UBERON:0002204!2.12e-08!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.22e-08,46 | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0,0.516493293766305,3.94208422024667,2.57470978954193,0.171217968225505,0.239316476986009,0.684802919724823,0.961624426608971,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,7.95210098400125,0.7813353445238,8.37637990358077,17.0587131528994,2.73218193983378,4.85510353031154,0.125896817975577,0.101376931219515,0.550640256485045,0,0,0,0,0,0,0.838913030288682,0.725362142011344,1.68046899571232,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.302286240427142,0,0.860423876981386,1.3599426674155,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0.23517741427141,0.251333182659351,0.741584903203122,0.722996784599558,0,0,0.220841518460394,0,0,0,0,0,4.79260498023681,1.79970819298022,4.70159840170339,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0.702213187313235,1.28673953557358,4.26245249093389,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0.585400943573396,0,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,3.73952545986482,2.37917468950219,1.93479963326193,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr10:89208540..89208552,- | |||
}} |
Revision as of 17:56, 12 September 2013
Short description: | p@chr10:89208540..89208552, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:89208540..89208552, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.86e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.86e-09 | 32 |
hematopoietic stem cell | 1.86e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.86e-09 | 32 |
stem cell | 1.43e-08 | 97 |
connective tissue cell | 6.22e-08 | 46 |
mesenchymal cell | 6.22e-08 | 46 |
common myeloid progenitor | 9.51e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.22e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.23e-08 | 3 |
muscle cancer | 2.23e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.