FFCP PHASE1:Mm9::chr12:114720582..114720589,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=50|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114720582..114720589,-|id=chr12:114720582..114720589,-|ontology_enrichment_celltype=CL:0000553!3.10e-13!6;CL:0000556!3.10e-13!6;CL:0002031!5.53e-09!25;CL:0000050!7.14e-09!9;CL:0000414!2.81e-07!11;CL:0000988!7.65e-07!32;CL:0002032!7.65e-07!32;CL:0000037!7.65e-07!32;CL:0000566!7.65e-07!32;CL:0000837!7.65e-07!32|ontology_enrichment_celltype_v019_2=CL:0000945,1.39e-22,1;CL:0000236,1.39e-22,1;CL:0000826,1.39e-22,1;CL:0000838,3.40e-17,12;CL:0000542,5.98e-16,13;CL:0000051,5.98e-16,13;CL:0000738,2.01e-12,17;CL:0002087,2.01e-12,17;CL:0000084,4.82e-09,11;CL:0000827,4.82e-09,11;CL:0002031,9.87e-09,25;CL:0000988,5.32e-07,32;CL:0002032,5.32e-07,32;CL:0000037,5.32e-07,32;CL:0000837,5.32e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!1.84e-07!6;UBERON:0004457!1.84e-07!6;UBERON:0000042!1.84e-07!6;UBERON:0004854!1.84e-07!6;UBERON:0009034!1.84e-07!6;UBERON:0002095!1.84e-07!6;UBERON:0004782!1.84e-07!6;UBERON:0003281!1.84e-07!6;UBERON:0009664!1.84e-07!6;UBERON:0002296!1.84e-07!6;UBERON:0005602!1.84e-07!6;UBERON:0001179!1.84e-07!6;UBERON:0006293!1.84e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000029,8.39e-23,1;UBERON:0001097,8.39e-23,1;UBERON:0003968,8.39e-23,1;UBERON:0001467,8.39e-23,1;UBERON:0002465,1.59e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.630924330716475,0.685572168028694,0.84877930359606,0,4.0709289992363,3.13439746966722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr12:114720582..114720589,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114720582..114720589,- | |||
|id=chr12:114720582..114720589,- | |||
|ontology_enrichment_celltype=CL:0000553!3.10e-13!6;CL:0000556!3.10e-13!6;CL:0002031!5.53e-09!25;CL:0000050!7.14e-09!9;CL:0000414!2.81e-07!11;CL:0000988!7.65e-07!32;CL:0002032!7.65e-07!32;CL:0000037!7.65e-07!32;CL:0000566!7.65e-07!32;CL:0000837!7.65e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.39e-22,1;CL:0000236,1.39e-22,1;CL:0000826,1.39e-22,1;CL:0000838,3.40e-17,12;CL:0000542,5.98e-16,13;CL:0000051,5.98e-16,13;CL:0000738,2.01e-12,17;CL:0002087,2.01e-12,17;CL:0000084,4.82e-09,11;CL:0000827,4.82e-09,11;CL:0002031,9.87e-09,25;CL:0000988,5.32e-07,32;CL:0002032,5.32e-07,32;CL:0000037,5.32e-07,32;CL:0000837,5.32e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.84e-07!6;UBERON:0004457!1.84e-07!6;UBERON:0000042!1.84e-07!6;UBERON:0004854!1.84e-07!6;UBERON:0009034!1.84e-07!6;UBERON:0002095!1.84e-07!6;UBERON:0004782!1.84e-07!6;UBERON:0003281!1.84e-07!6;UBERON:0009664!1.84e-07!6;UBERON:0002296!1.84e-07!6;UBERON:0005602!1.84e-07!6;UBERON:0001179!1.84e-07!6;UBERON:0006293!1.84e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,8.39e-23,1;UBERON:0001097,8.39e-23,1;UBERON:0003968,8.39e-23,1;UBERON:0001467,8.39e-23,1;UBERON:0002465,1.59e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.630924330716475,0.685572168028694,0.84877930359606,0,4.0709289992363,3.13439746966722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0.188368457004691,0.27338845544205,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:114720582..114720589,- | |||
}} |
Revision as of 22:27, 12 September 2013
Short description: | p@chr12:114720582..114720589, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114720582..114720589, - |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.39e-22 | 1 |
B cell | 1.39e-22 | 1 |
pro-B cell | 1.39e-22 | 1 |
lymphoid lineage restricted progenitor cell | 3.40e-17 | 12 |
lymphocyte | 5.98e-16 | 13 |
common lymphoid progenitor | 5.98e-16 | 13 |
leukocyte | 2.01e-12 | 17 |
nongranular leukocyte | 2.01e-12 | 17 |
T cell | 4.82e-09 | 11 |
pro-T cell | 4.82e-09 | 11 |
hematopoietic lineage restricted progenitor cell | 9.87e-09 | 25 |
hematopoietic cell | 5.32e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.32e-07 | 32 |
hematopoietic stem cell | 5.32e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.32e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymph node | 8.39e-23 | 1 |
axillary lymph node | 8.39e-23 | 1 |
peripheral lymph node | 8.39e-23 | 1 |
shoulder | 8.39e-23 | 1 |
lymphoid system | 1.59e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.