Personal tools

FFCP PHASE1:Mm9::chr12:28025483..28025507,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=100|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:28025483..28025507,-|id=chr12:28025483..28025507,-|ontology_enrichment_celltype=CL:0000540!2.70e-12!33;CL:0000047!2.70e-12!33;CL:0000031!2.70e-12!33;CL:0000404!2.70e-12!33;CL:0000117!4.05e-10!23;CL:0000337!4.05e-10!23;CL:0000393!1.57e-08!39;CL:0000211!1.57e-08!39;CL:0000221!2.14e-08!44;CL:0000133!2.14e-08!44;CL:0002319!3.60e-08!43|ontology_enrichment_celltype_v019_2=CL:0000540,4.70e-17,33;CL:0000047,4.70e-17,33;CL:0000031,4.70e-17,33;CL:0000404,4.70e-17,33;CL:0000117,3.61e-15,23;CL:0000337,3.61e-15,23;CL:0000393,1.46e-13,39;CL:0000211,1.46e-13,39;CL:0002609,3.44e-12,6;CL:0002319,8.68e-12,43;CL:0000221,2.14e-11,44;CL:0000133,2.14e-11,44;CL:0002608,8.99e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!6.59e-08!49;UBERON:0002346!9.19e-08!71;UBERON:0003075!9.19e-08!71;UBERON:0007284!9.19e-08!71;UBERON:0001017!2.48e-07!73;UBERON:0005743!2.48e-07!73;UBERON:0004121!7.58e-07!102;UBERON:0000924!7.58e-07!102;UBERON:0006601!7.58e-07!102;UBERON:0000073!9.82e-07!75;UBERON:0001016!9.82e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.12e-13,64;UBERON:0003075,3.12e-13,64;UBERON:0007284,3.12e-13,64;UBERON:0003056,3.24e-12,49;UBERON:0010371,9.04e-12,73;UBERON:0004121,6.13e-11,95;UBERON:0000924,6.13e-11,95;UBERON:0006601,6.13e-11,95;UBERON:0001017,7.08e-11,73;UBERON:0001016,2.14e-10,75;UBERON:0002780,1.89e-09,39;UBERON:0001890,1.89e-09,39;UBERON:0006240,1.89e-09,39;UBERON:0003080,4.21e-09,40;UBERON:0002020,1.07e-08,34;UBERON:0010314,1.51e-08,92;UBERON:0003528,4.61e-08,29;UBERON:0002791,4.61e-08,29;UBERON:0001893,4.61e-08,29;UBERON:0001049,8.00e-08,52;UBERON:0005068,8.00e-08,52;UBERON:0006241,8.00e-08,52;UBERON:0007135,8.00e-08,52;UBERON:0000073,2.35e-07,54;UBERON:0002616,2.41e-07,46;UBERON:0000955,4.25e-07,47;UBERON:0006238,4.25e-07,47|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,4.65327859977075,8.46385566835253,5.07065122804943,0,0,0.449949858640699,0,0,0.898800331555214,0,18.2493717662921,22.4109857630606,15.5640471400023,0.856952953211411,0,7.83941114975706,11.5014565221884,7.35375029288017,0,0.255374676170375,0.153606533256243,5.53922408466814,5.94669683415663,4.68822033501084,0.279182999001381,1.12552522006336,0.15279824777681,1.17851434189467,0.711858403995515,3.16879057903011,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.563373679106722,0,0,0,0.432982082022428,0.506719730950197,0,0,0,0,1.04091196059682,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0.247194967734374,0,0,0.485300549842228,0,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,6.91098936620754,0.173824320192276,0,0,0.648965052271031,0.407357455401265,0,0,0,4.68433594665733,0.689706313300419,1.44049703844279,2.56198190320716,1.63287597963187,1.5373646434182,0.937017245597288,0,2.80238390812695,0.945530400839096,1.93546236580344,0.657587197282725,1.39023624612799,0.348252166522167,0.61734640922383,2.58744546864041,0,0,0,0,0.938104239924385,0.720248245844059,0,0.590292695242212,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0,6.5858951922742,0,0,2.13288250535234,1.16118335930219,0,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0.898819408654221,0,0,0.189667900953082,2.05647322697512,2.25415471346161,1.22190796707189,1.74557238450863,0.561086559122548,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.488894929326078,0.339490171550376,1.17345124144251,0.167506257441816,0.238043640886014,0.585400943573396,0.315270288212382,0.664394068946325,0.478364305972461,0.655453258862952,0,0.289298117163023,0,0,0,0,0,0,0,0,2.52406575533005,1.17131623288992,1.72338718186239,0.955875191810208,0.891194696329576,0,0,1.16902343164525,0.395287777946524,0,0,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,4.86164953884538,3.23396709456886,1.07168517515796,0.177340233642274,1.78368817602071,0.822745103010605,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0,1.73984796469624,0.203319467126849,0.86404272657441,0.627264888043406,0.436725127492355,0.539457385539283,0,0.26175594198403,0,0,0,0.747582730219894,0.66183396182839,0.194451188344048,0.904118764344118,0.506868376472335,0.469428954583016,0.2604087696879,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0.171853182343688,0,0,0.675022500231806,0,0,0,10.0673727156651,0.798049746802062,2.39027048055788,0.729320151204882,0.838452650511929,0.735374033800057,0.666740183404846,0.824140228955577,0.320919209591815,0.252697211763798,1.2673964994512,0.565879024158229,0.187283014939765,0.512201219238954,0.746661096422973,0,0.347652977834566,1.15745532278223,1.23625770240992,1.17759136107518,1.37147700954166,0.532427418478012,1.1921809497366,0.726732083161643,0.752875043322645,0.761531471025089,0.914639864363863,0.526139422875686,1.22223702461276,0.561142271657738,1.06771516311757,0.886540341380071,0.818462086339379,0.77468420592983,0.385813221962283,1.74867404556562,0.935726433781634,0.429742108096597,0,0,0|short_description=p@chr12:28025483..28025507,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=100
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr12:28025483..28025507,-
|id=chr12:28025483..28025507,-
|ontology_enrichment_celltype=CL:0000540!2.70e-12!33;CL:0000047!2.70e-12!33;CL:0000031!2.70e-12!33;CL:0000404!2.70e-12!33;CL:0000117!4.05e-10!23;CL:0000337!4.05e-10!23;CL:0000393!1.57e-08!39;CL:0000211!1.57e-08!39;CL:0000221!2.14e-08!44;CL:0000133!2.14e-08!44;CL:0002319!3.60e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000540,4.70e-17,33;CL:0000047,4.70e-17,33;CL:0000031,4.70e-17,33;CL:0000404,4.70e-17,33;CL:0000117,3.61e-15,23;CL:0000337,3.61e-15,23;CL:0000393,1.46e-13,39;CL:0000211,1.46e-13,39;CL:0002609,3.44e-12,6;CL:0002319,8.68e-12,43;CL:0000221,2.14e-11,44;CL:0000133,2.14e-11,44;CL:0002608,8.99e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003056!6.59e-08!49;UBERON:0002346!9.19e-08!71;UBERON:0003075!9.19e-08!71;UBERON:0007284!9.19e-08!71;UBERON:0001017!2.48e-07!73;UBERON:0005743!2.48e-07!73;UBERON:0004121!7.58e-07!102;UBERON:0000924!7.58e-07!102;UBERON:0006601!7.58e-07!102;UBERON:0000073!9.82e-07!75;UBERON:0001016!9.82e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.12e-13,64;UBERON:0003075,3.12e-13,64;UBERON:0007284,3.12e-13,64;UBERON:0003056,3.24e-12,49;UBERON:0010371,9.04e-12,73;UBERON:0004121,6.13e-11,95;UBERON:0000924,6.13e-11,95;UBERON:0006601,6.13e-11,95;UBERON:0001017,7.08e-11,73;UBERON:0001016,2.14e-10,75;UBERON:0002780,1.89e-09,39;UBERON:0001890,1.89e-09,39;UBERON:0006240,1.89e-09,39;UBERON:0003080,4.21e-09,40;UBERON:0002020,1.07e-08,34;UBERON:0010314,1.51e-08,92;UBERON:0003528,4.61e-08,29;UBERON:0002791,4.61e-08,29;UBERON:0001893,4.61e-08,29;UBERON:0001049,8.00e-08,52;UBERON:0005068,8.00e-08,52;UBERON:0006241,8.00e-08,52;UBERON:0007135,8.00e-08,52;UBERON:0000073,2.35e-07,54;UBERON:0002616,2.41e-07,46;UBERON:0000955,4.25e-07,47;UBERON:0006238,4.25e-07,47
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,4.65327859977075,8.46385566835253,5.07065122804943,0,0,0.449949858640699,0,0,0.898800331555214,0,18.2493717662921,22.4109857630606,15.5640471400023,0.856952953211411,0,7.83941114975706,11.5014565221884,7.35375029288017,0,0.255374676170375,0.153606533256243,5.53922408466814,5.94669683415663,4.68822033501084,0.279182999001381,1.12552522006336,0.15279824777681,1.17851434189467,0.711858403995515,3.16879057903011,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0.563373679106722,0,0,0,0.432982082022428,0.506719730950197,0,0,0,0,1.04091196059682,0,0.230615497256059,0.301445281105245,0.117588707135705,0,0.247194967734374,0,0,0.485300549842228,0,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,6.91098936620754,0.173824320192276,0,0,0.648965052271031,0.407357455401265,0,0,0,4.68433594665733,0.689706313300419,1.44049703844279,2.56198190320716,1.63287597963187,1.5373646434182,0.937017245597288,0,2.80238390812695,0.945530400839096,1.93546236580344,0.657587197282725,1.39023624612799,0.348252166522167,0.61734640922383,2.58744546864041,0,0,0,0,0.938104239924385,0.720248245844059,0,0.590292695242212,0,0.232533944750408,0,0.116765342367169,0,0,0,0,0,0,0,6.5858951922742,0,0,2.13288250535234,1.16118335930219,0,0,0,0,0,0.329397909448022,0,0,0.19496408711912,0.898819408654221,0,0,0.189667900953082,2.05647322697512,2.25415471346161,1.22190796707189,1.74557238450863,0.561086559122548,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.488894929326078,0.339490171550376,1.17345124144251,0.167506257441816,0.238043640886014,0.585400943573396,0.315270288212382,0.664394068946325,0.478364305972461,0.655453258862952,0,0.289298117163023,0,0,0,0,0,0,0,0,2.52406575533005,1.17131623288992,1.72338718186239,0.955875191810208,0.891194696329576,0,0,1.16902343164525,0.395287777946524,0,0,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0,0,0,0,0,4.86164953884538,3.23396709456886,1.07168517515796,0.177340233642274,1.78368817602071,0.822745103010605,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0,1.73984796469624,0.203319467126849,0.86404272657441,0.627264888043406,0.436725127492355,0.539457385539283,0,0.26175594198403,0,0,0,0.747582730219894,0.66183396182839,0.194451188344048,0.904118764344118,0.506868376472335,0.469428954583016,0.2604087696879,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0.171853182343688,0,0,0.675022500231806,0,0,0,10.0673727156651,0.798049746802062,2.39027048055788,0.729320151204882,0.838452650511929,0.735374033800057,0.666740183404846,0.824140228955577,0.320919209591815,0.252697211763798,1.2673964994512,0.565879024158229,0.187283014939765,0.512201219238954,0.746661096422973,0,0.347652977834566,1.15745532278223,1.23625770240992,1.17759136107518,1.37147700954166,0.532427418478012,1.1921809497366,0.726732083161643,0.752875043322645,0.761531471025089,0.914639864363863,0.526139422875686,1.22223702461276,0.561142271657738,1.06771516311757,0.886540341380071,0.818462086339379,0.77468420592983,0.385813221962283,1.74867404556562,0.935726433781634,0.429742108096597,0,0,0
|short_description=p@chr12:28025483..28025507,-
}}

Revision as of 22:39, 12 September 2013

Short description:p@chr12:28025483..28025507, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr12:28025483..28025507, -
Coexpression cluster:MCL_coexpression_mm9:100
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr12:28025483..28025507-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C64.68
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I810.07
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm3.12e-1364
neural plate3.12e-1364
presumptive neural plate3.12e-1364
pre-chordal neural plate3.24e-1249
ecto-epithelium9.04e-1273
ectoderm-derived structure6.13e-1195
ectoderm6.13e-1195
presumptive ectoderm6.13e-1195
central nervous system7.08e-1173
nervous system2.14e-1075
regional part of forebrain1.89e-0939
forebrain1.89e-0939
future forebrain1.89e-0939
anterior neural tube4.21e-0940
gray matter1.07e-0834
structure with developmental contribution from neural crest1.51e-0892
brain grey matter4.61e-0829
regional part of telencephalon4.61e-0829
telencephalon4.61e-0829
neural tube8.00e-0852
neural rod8.00e-0852
future spinal cord8.00e-0852
neural keel8.00e-0852
regional part of nervous system2.35e-0754
regional part of brain2.41e-0746
brain4.25e-0747
future brain4.25e-0747







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:28025483..28025507,-&oldid=2902885"