FFCP PHASE1:Mm9::chr13:56190026..56190029,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:56190026..56190029,-|id=chr13:56190026..56190029,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,3.09e-08,3;CL:0000084,4.91e-08,11;CL:0000827,4.91e-08,11;CL:0000738,9.80e-08,17;CL:0002087,9.80e-08,17;CL:0000838,2.24e-07,12;CL:0000542,8.12e-07,13;CL:0000051,8.12e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001044,8.36e-07,1;UBERON:0001736,8.36e-07,1;UBERON:0003293,8.36e-07,1;UBERON:0003294,8.36e-07,1;UBERON:0001829,8.36e-07,1;UBERON:0010047,8.36e-07,1;UBERON:0000167,8.36e-07,1;UBERON:0006298,8.36e-07,1|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.03298658753261,0.422366166455,0.234064526321993,0.68487187290202,0.159544317990673,1.36960583944965,0.961624426608971,0.333109761815663,0.202475267389826,0,0.630924330716475,0.685572168028694,0.84877930359606,0.510259740906419,2.58156473122302,3.91799683708403,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0.629484089877886,0.405507724878058,0.367093504323363,0,0,0,0.194429899074283,0,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.182975287204819,1.04182674111352,0,0.56276261003168,0,0,0,0.186399445825301,0.227178579999552,0.377857800533928,0.579728977403356,0,0,0,0,0,0,0,0.259786004602869,0,0.422530259330042,1.28326477414318,0,7.11066703153331,0.216491041011214,0.506719730950197,1.01104889002957,0.11418387971906,0,0.593768556259299,0.173485326766136,0,0.230615497256059,0.452167921657868,0.705532242814229,0.251333182659351,0.494389935468748,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,0.255457055208591,0.11981512450592,0.599902730993408,0.508280908292259,0,0,0.125654352112864,0.173824320192276,0.511430914660661,0,0,0.81471491080253,0.373220911830279,0.505445516867349,0.210441855886474,0.390361328888111,0,0.360124259610698,0.452114453507145,0.476255494059295,0.512454881139399,0.281105173679186,0.517406741478031,0,0.378212160335639,0.175951124163949,0.657587197282725,1.11218899690239,0.348252166522167,0,0.796137067273973,0,0,0.568326998791185,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.617068451549513,0.232533944750408,0,0.467061369468678,0.822799249567402,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,0,0.308713837137853,0,0,0.853153002140936,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0,0,0,0.597423819763102,0.569003702859245,0.456994050438915,0,1.01825663922657,0.193952487167626,0.350679099451593,0.379419222745544,0.147610147979602,0.156998727841375,0.246794327843601,0,0.333690211432188,0.589676985339609,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.823684239564244,1.43768206527355,0,1.5601883655728,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0.585400943573396,0,0.44292937929755,0,0.491589944147214,0.863424909329478,0.433947175744535,0,1.08781136763742,0.491764273019036,0.275936746304732,0.321101179975584,0,0,0.252470927204373,0,0,0.430846795465598,0,0.445597348164788,0,0.404810701674894,0.584511715822624,0,0,0.425820255624806,0.712262414669021,0,0.659880491890142,0,0,0,0.565815239267694,0,0.614870295887855,0.258428293168221,0.363533729477506,0,0,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,0.356737635204141,0.822745103010605,0.608929898229199,0.469343416127421,0.42366414172764,0.220528398054962,0,0.645857706783622,0.361877549568935,0.358117032009409,0,0.874442509889552,0.18542530201051,0.341741761595705,0.412773735926445,0.185194527369712,0.753473828018764,0.410082683163076,0.457556346413045,0.679913719975421,0,0.690999869022119,0.954670618015114,0.316335993581135,0.406638934253697,0.972048067396211,0.209088296014469,0,0.809186078308924,0.578574190077352,0.523511883968059,0.388844919875379,1.86401793926078,0,0.149516546043979,0.992750942742586,0.583353565032143,0.387479470433193,0.844780627453891,0.469428954583016,0.5208175393758,0.209718688851422,0.241584120826006,0,0.632022241256357,0.202725215290164,0.102710957164827,0.649604114888975,0.358053391334963,0.39736270956253,1.08175904567972,0.147689527174577,0.605798699688886,0.533447646584999,0.604957110821043,0.877120926657772,0.769694733122636,0.701261413089414,0,0,0,0.167884616364078,0,0.187682475451182,0.36630324853453,0.214368379079066,0.50157210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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:56190026..56190029,- | |||
|id=chr13:56190026..56190029,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,3.09e-08,3;CL:0000084,4.91e-08,11;CL:0000827,4.91e-08,11;CL:0000738,9.80e-08,17;CL:0002087,9.80e-08,17;CL:0000838,2.24e-07,12;CL:0000542,8.12e-07,13;CL:0000051,8.12e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,8.36e-07,1;UBERON:0001736,8.36e-07,1;UBERON:0003293,8.36e-07,1;UBERON:0003294,8.36e-07,1;UBERON:0001829,8.36e-07,1;UBERON:0010047,8.36e-07,1;UBERON:0000167,8.36e-07,1;UBERON:0006298,8.36e-07,1 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,1.03298658753261,0.422366166455,0.234064526321993,0.68487187290202,0.159544317990673,1.36960583944965,0.961624426608971,0.333109761815663,0.202475267389826,0,0.630924330716475,0.685572168028694,0.84877930359606,0.510259740906419,2.58156473122302,3.91799683708403,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0.629484089877886,0.405507724878058,0.367093504323363,0,0,0,0.194429899074283,0,0,0.167782606057736,0.725362142011344,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0.287536413054709,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.182975287204819,1.04182674111352,0,0.56276261003168,0,0,0,0.186399445825301,0.227178579999552,0.377857800533928,0.579728977403356,0,0,0,0,0,0,0,0.259786004602869,0,0.422530259330042,1.28326477414318,0,7.11066703153331,0.216491041011214,0.506719730950197,1.01104889002957,0.11418387971906,0,0.593768556259299,0.173485326766136,0,0.230615497256059,0.452167921657868,0.705532242814229,0.251333182659351,0.494389935468748,0.144599356919912,0,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,0.255457055208591,0.11981512450592,0.599902730993408,0.508280908292259,0,0,0.125654352112864,0.173824320192276,0.511430914660661,0,0,0.81471491080253,0.373220911830279,0.505445516867349,0.210441855886474,0.390361328888111,0,0.360124259610698,0.452114453507145,0.476255494059295,0.512454881139399,0.281105173679186,0.517406741478031,0,0.378212160335639,0.175951124163949,0.657587197282725,1.11218899690239,0.348252166522167,0,0.796137067273973,0,0,0.568326998791185,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.617068451549513,0.232533944750408,0,0.467061369468678,0.822799249567402,0.492502392237286,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,0,0.308713837137853,0,0,0.853153002140936,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0.502670417600539,0.198956472041151,0,0,0,0.597423819763102,0.569003702859245,0.456994050438915,0,1.01825663922657,0.193952487167626,0.350679099451593,0.379419222745544,0.147610147979602,0.156998727841375,0.246794327843601,0,0.333690211432188,0.589676985339609,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.823684239564244,1.43768206527355,0,1.5601883655728,0.252578877947112,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0.238043640886014,0.585400943573396,0,0.44292937929755,0,0.491589944147214,0.863424909329478,0.433947175744535,0,1.08781136763742,0.491764273019036,0.275936746304732,0.321101179975584,0,0,0.252470927204373,0,0,0.430846795465598,0,0.445597348164788,0,0.404810701674894,0.584511715822624,0,0,0.425820255624806,0.712262414669021,0,0.659880491890142,0,0,0,0.565815239267694,0,0.614870295887855,0.258428293168221,0.363533729477506,0,0,0,0,1.02131881726136,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,0.356737635204141,0.822745103010605,0.608929898229199,0.469343416127421,0.42366414172764,0.220528398054962,0,0.645857706783622,0.361877549568935,0.358117032009409,0,0.874442509889552,0.18542530201051,0.341741761595705,0.412773735926445,0.185194527369712,0.753473828018764,0.410082683163076,0.457556346413045,0.679913719975421,0,0.690999869022119,0.954670618015114,0.316335993581135,0.406638934253697,0.972048067396211,0.209088296014469,0,0.809186078308924,0.578574190077352,0.523511883968059,0.388844919875379,1.86401793926078,0,0.149516546043979,0.992750942742586,0.583353565032143,0.387479470433193,0.844780627453891,0.469428954583016,0.5208175393758,0.209718688851422,0.241584120826006,0,0.632022241256357,0.202725215290164,0.102710957164827,0.649604114888975,0.358053391334963,0.39736270956253,1.08175904567972,0.147689527174577,0.605798699688886,0.533447646584999,0.604957110821043,0.877120926657772,0.769694733122636,0.701261413089414,0,0,0,0.167884616364078,0,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0.343706364687375,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0.729320151204882,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.37456602987953,0.128050304809739,0.34461281373368,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0.177475806159338,0.476872379894642,0.145346416632329,0.376437521661322,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,1.12228454331548,0,0.492522411877817,0,0,0.771626443924566,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr13:56190026..56190029,- | |||
}} |
Revision as of 00:52, 13 September 2013
Short description: | p@chr13:56190026..56190029, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:56190026..56190029, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 3.09e-08 | 3 |
T cell | 4.91e-08 | 11 |
pro-T cell | 4.91e-08 | 11 |
leukocyte | 9.80e-08 | 17 |
nongranular leukocyte | 9.80e-08 | 17 |
lymphoid lineage restricted progenitor cell | 2.24e-07 | 12 |
lymphocyte | 8.12e-07 | 13 |
common lymphoid progenitor | 8.12e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 8.36e-07 | 1 |
submandibular gland | 8.36e-07 | 1 |
gland of oral region | 8.36e-07 | 1 |
gland of foregut | 8.36e-07 | 1 |
major salivary gland | 8.36e-07 | 1 |
oral gland | 8.36e-07 | 1 |
oral cavity | 8.36e-07 | 1 |
submandibular gland primordium | 8.36e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.