FFCP PHASE1:Mm9::chr17:66426373..66426421,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100505124,106585|HGNC=|MCL_coexpression_id=1523|UniProt=G5E893,Q05CM6,Q80TP9,Q3UZR0,Q9CQQ3|association_with_transcript=0bp_to_ENSMUST00000038116,ENSMUST00000135136,ENSMUST00000143516,NM_001025572,uc008dgs.1,uc008dgt.1,uc008dgu.1,uc008dgv.1_5end|description=CAGE_peak_1_at_Ankrd12_5end,CAGE_peak_1_at_LOC100505124_5end|id=chr17:66426373..66426421,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.86e-07,10;UBERON:0000411,3.86e-07,10;UBERON:0001950,3.86e-07,10|phase1_expression=19.5381593467849,19.8915982354436,15.4699741392442,18.7527811010235,20.0358291978539,13.2624624810393,10.0453435456076,26.9867745992894,11.6854639385883,14.2779361056416,7.19115466547121,10.1310641924077,20.0304854019511,23.1664066410343,12.9912807108108,15.9955461237963,15.3903613188192,21.7668894097184,27.834230021965,22.4926515452956,21.0056926673142,8.43973085207525,5.74639536105658,9.11956809922418,4.5881856213434,12.6331032105304,10.7690499039769,7.97243560937789,7.60093677825496,10.3332353201572,7.98229838359097,3.81018404075779,2.46025915033828,0,7.22129049378186,5.15327400611326,8.98345167554424,49.3867324269551,29.6907430919044,53.9229456293012,48.8232135065742,54.6436387966757,48.5510353031154,19.8916972401412,17.132701376098,17.0698479510364,3.9119567217402,2.18025156380447,1.31811709640683,3.88859798148567,4.05960622713551,1.43752564364972,26.3418691510646,22.4862264023517,17.1407837562657,6.17422646486273,12.3209379173665,6.18806510732931,13.3528864167335,11.6378015439847,12.0427966666174,3.72728985276045,2.66788438833342,3.1496490104849,2.96659908770092,2.1314403448383,2.69640099466564,3.45796474789399,9.22837549545451,5.94026128659439,7.78202357000113,12.5686433137674,19.436431603742,11.7591167246356,9.29701068876893,5.51531271966013,19.82085857989,23.7498448838449,28.417208652405,11.3422207447967,11.3444678066988,16.1483144872596,11.4465029590566,20.8222165711722,30.1012548120316,39.4802304534715,35.0234334765793,19.5719418116566,19.6130840732947,18.8173184665896,19.1310562543107,4.30211938490693,1.3599426674155,2.69851595818909,3.89865850468601,4.03224198387602,14.0444420131752,16.0204503223374,10.6512261887176,7.0667914902068,14.7885590765515,25.6652954828636,73.8935195149272,49.7746692207332,2.59789249213457,2.78695852022608,3.0331466700887,12.1034912502204,58.778899587908,18.2583831049734,5.72501578328248,3.95805121805784,6.91846491768175,8.13902258984162,15.8744754633201,7.1629957057915,25.9554716121093,26.8954803871036,19.4614321428972,11.1619126463712,10.8212344045593,13.5765070877862,7.45567044872489,63.2406521544942,54.0372503578714,14.3055950916811,7.0690923458493,7.19883277192089,6.73472203487243,41.0426351969214,43.4625572677695,58.8062367888205,43.9775530086459,40.6587577155226,33.2460871295296,33.7461827180936,16.5998163076016,19.9051152976149,15.6688110228878,29.6723016799928,12.6216829673823,8.04657365517155,10.9837899181263,15.3718914192429,21.7716797284249,24.2134931338366,25.580570804806,53.2928943722372,3.23351989399263,11.9136830505726,12.8444320639683,8.54863356467542,16.4047877043103,12.8853301613202,12.9642745937004,11.5439874754726,11.937624184325,9.26452465612975,4.54661599032948,6.42089894860056,9.61556845922494,7.20248245844059,9.46978942340841,12.3961466000864,12.0328348052155,11.6266972375204,14.4867636755794,19.6165775176845,11.6837493438571,12.3125598059321,17.5108628619048,13.7427988179812,10.9775057645525,14.7627060636409,35.9595812044658,50.1145462287115,11.5646574044329,10.5780226665418,7.25180051819795,12.3085436086032,11.9846739029547,15.327947871374,17.7902435075896,14.4571475845545,13.7613427847908,12.3524216043008,17.8447998248191,19.0998213159505,20.2762650603885,11.6846523125049,17.2910439899755,16.7278669533668,2.27601481143698,11.4248512609729,13.5249282807697,13.0336849821001,11.6371492300575,19.6380295692892,18.4650688402831,20.8130308651239,17.583857518234,15.3012483263033,7.41131567717872,5.00535317148282,4.52085688760367,3.37293168577281,8.72298521970563,7.95884627182976,9.93040821947537,8.63088412352432,10.2145192868272,4.94210543738547,12.9391385874619,9.67566463938109,10.6092808858951,4.54641980304801,3.04975602987251,9.16642690590398,30.2995231873232,7.95863929436036,7.82231886921724,7.46878377410828,9.62230017982859,14.7405506548798,13.3304438896168,16.3912264200551,22.8570958953977,22.3679336545263,24.237124835938,31.6256197401374,17.9592381140531,18.370430439852,25.6345182696763,17.4049818821987,10.3270497333998,9.93372286697037,25.3669932180711,29.1857099614586,6.55739781506702,11.8661335786055,8.20321370482267,8.98009111882268,12.9254038639679,11.2315335037699,16.0415045339324,20.6645867475848,12.9539424535966,9.64444331107329,17.7879500075936,55.5885877409726,18.8780313326997,6.94455854302295,15.80003505729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| ||
|EntrezGene=100505124,106585 | |||
|HGNC= | |||
|MCL_coexpression_id=1523 | |||
|UniProt=G5E893,Q05CM6,Q80TP9,Q3UZR0,Q9CQQ3 | |||
|association_with_transcript=0bp_to_ENSMUST00000038116,ENSMUST00000135136,ENSMUST00000143516,NM_001025572,uc008dgs.1,uc008dgt.1,uc008dgu.1,uc008dgv.1_5end | |||
|description=CAGE_peak_1_at_Ankrd12_5end,CAGE_peak_1_at_LOC100505124_5end | |||
|id=chr17:66426373..66426421,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.86e-07!10;UBERON:0000411!3.86e-07!10;UBERON:0001950!3.86e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.86e-07,10;UBERON:0000411,3.86e-07,10;UBERON:0001950,3.86e-07,10 | |||
|phase1_expression=19.5381593467849,19.8915982354436,15.4699741392442,18.7527811010235,20.0358291978539,13.2624624810393,10.0453435456076,26.9867745992894,11.6854639385883,14.2779361056416,7.19115466547121,10.1310641924077,20.0304854019511,23.1664066410343,12.9912807108108,15.9955461237963,15.3903613188192,21.7668894097184,27.834230021965,22.4926515452956,21.0056926673142,8.43973085207525,5.74639536105658,9.11956809922418,4.5881856213434,12.6331032105304,10.7690499039769,7.97243560937789,7.60093677825496,10.3332353201572,7.98229838359097,3.81018404075779,2.46025915033828,0,7.22129049378186,5.15327400611326,8.98345167554424,49.3867324269551,29.6907430919044,53.9229456293012,48.8232135065742,54.6436387966757,48.5510353031154,19.8916972401412,17.132701376098,17.0698479510364,3.9119567217402,2.18025156380447,1.31811709640683,3.88859798148567,4.05960622713551,1.43752564364972,26.3418691510646,22.4862264023517,17.1407837562657,6.17422646486273,12.3209379173665,6.18806510732931,13.3528864167335,11.6378015439847,12.0427966666174,3.72728985276045,2.66788438833342,3.1496490104849,2.96659908770092,2.1314403448383,2.69640099466564,3.45796474789399,9.22837549545451,5.94026128659439,7.78202357000113,12.5686433137674,19.436431603742,11.7591167246356,9.29701068876893,5.51531271966013,19.82085857989,23.7498448838449,28.417208652405,11.3422207447967,11.3444678066988,16.1483144872596,11.4465029590566,20.8222165711722,30.1012548120316,39.4802304534715,35.0234334765793,19.5719418116566,19.6130840732947,18.8173184665896,19.1310562543107,4.30211938490693,1.3599426674155,2.69851595818909,3.89865850468601,4.03224198387602,14.0444420131752,16.0204503223374,10.6512261887176,7.0667914902068,14.7885590765515,25.6652954828636,73.8935195149272,49.7746692207332,2.59789249213457,2.78695852022608,3.0331466700887,12.1034912502204,58.778899587908,18.2583831049734,5.72501578328248,3.95805121805784,6.91846491768175,8.13902258984162,15.8744754633201,7.1629957057915,25.9554716121093,26.8954803871036,19.4614321428972,11.1619126463712,10.8212344045593,13.5765070877862,7.45567044872489,63.2406521544942,54.0372503578714,14.3055950916811,7.0690923458493,7.19883277192089,6.73472203487243,41.0426351969214,43.4625572677695,58.8062367888205,43.9775530086459,40.6587577155226,33.2460871295296,33.7461827180936,16.5998163076016,19.9051152976149,15.6688110228878,29.6723016799928,12.6216829673823,8.04657365517155,10.9837899181263,15.3718914192429,21.7716797284249,24.2134931338366,25.580570804806,53.2928943722372,3.23351989399263,11.9136830505726,12.8444320639683,8.54863356467542,16.4047877043103,12.8853301613202,12.9642745937004,11.5439874754726,11.937624184325,9.26452465612975,4.54661599032948,6.42089894860056,9.61556845922494,7.20248245844059,9.46978942340841,12.3961466000864,12.0328348052155,11.6266972375204,14.4867636755794,19.6165775176845,11.6837493438571,12.3125598059321,17.5108628619048,13.7427988179812,10.9775057645525,14.7627060636409,35.9595812044658,50.1145462287115,11.5646574044329,10.5780226665418,7.25180051819795,12.3085436086032,11.9846739029547,15.327947871374,17.7902435075896,14.4571475845545,13.7613427847908,12.3524216043008,17.8447998248191,19.0998213159505,20.2762650603885,11.6846523125049,17.2910439899755,16.7278669533668,2.27601481143698,11.4248512609729,13.5249282807697,13.0336849821001,11.6371492300575,19.6380295692892,18.4650688402831,20.8130308651239,17.583857518234,15.3012483263033,7.41131567717872,5.00535317148282,4.52085688760367,3.37293168577281,8.72298521970563,7.95884627182976,9.93040821947537,8.63088412352432,10.2145192868272,4.94210543738547,12.9391385874619,9.67566463938109,10.6092808858951,4.54641980304801,3.04975602987251,9.16642690590398,30.2995231873232,7.95863929436036,7.82231886921724,7.46878377410828,9.62230017982859,14.7405506548798,13.3304438896168,16.3912264200551,22.8570958953977,22.3679336545263,24.237124835938,31.6256197401374,17.9592381140531,18.370430439852,25.6345182696763,17.4049818821987,10.3270497333998,9.93372286697037,25.3669932180711,29.1857099614586,6.55739781506702,11.8661335786055,8.20321370482267,8.98009111882268,12.9254038639679,11.2315335037699,16.0415045339324,20.6645867475848,12.9539424535966,9.64444331107329,17.7879500075936,55.5885877409726,18.8780313326997,6.94455854302295,15.8000350572969,26.7251599215507,9.2921596837974,6.79785781233948,7.25576536715402,9.43025398779491,3.83892460745005,14.1420168054207,16.2809824695979,17.0860852854428,11.4079161083111,15.485801138855,12.6502330289999,21.6584640821192,21.7881347682424,11.5239100180039,2.71653235943784,7.28745919107414,13.8325382240973,11.0588666913284,12.9993726275676,3.95804433848979,13.1416156515678,13.9809166770121,16.5396298541221,50.4551934000929,20.9903754704677,17.6113740790215,18.9802026964987,20.6817533678777,15.1570035047522,23.1781627513137,18.1123133645724,9.49379592630823,13.519200497989,13.9392658183471,17.2234726928492,17.8446975101088,9.34881364966204,10.216456019627,11.0559979043539,9.54670618015114,4.74503990371703,10.3692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| |||
|short_description=p1@Ankrd12,p1@LOC100505124 | |||
}} | |||
Revision as of 15:08, 13 September 2013
| Short description: | p1@Ankrd12, p1@LOC100505124 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ankrd12_5end, CAGE_peak_1_at_LOC100505124_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1523 |
| Association with transcript: | 0bp_to_ENSMUST00000038116, ENSMUST00000135136, ENSMUST00000143516, NM_001025572, uc008dgs.1, uc008dgt.1, uc008dgu.1, uc008dgv.1_5end |
| EntrezGene: | 100505124,106585 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 3.86e-07 | 10 |
| visual cortex | 3.86e-07 | 10 |
| neocortex | 3.86e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
