FFCP PHASE1:Mm9::chr7:109590345..109590402,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20133|HGNC=|MCL_coexpression_id=49|UniProt=P07742|association_with_transcript=136bp_to_ENSMUST00000033283,NM_009103,uc009irp.2_5end|description=CAGE_peak_1_at_Rrm1_5end|id=chr7:109590345..109590402,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.22e-07,134;UBERON:0000926,8.91e-07,120;UBERON:0004120,8.91e-07,120;UBERON:0006603,8.91e-07,120|phase1_expression=11.69086583865,2.09385244583617,0.909998478779072,0.90739263392049,1.50268718983904,8.05820505177071,10.0453435456076,6.58528949552039,10.13678799492,9.36258105287974,3.08192342805909,5.42450681168288,5.47842335779858,4.89554253546385,120.918843539086,137.683181825082,246.245781101108,15.2999150198745,15.0825876966313,21.6438722416995,31.9762770968022,78.737724302302,95.5991228248503,15.0392877425802,11.6998733344257,2.29692785646008,7.75371593086335,9.48073423817912,9.69119439227507,9.8291750606373,12.6386391073524,43.8171164687146,31.3683041668131,47.5445043046316,45.3497043009501,58.8470644569063,45.7339358027707,41.016099812217,77.3521991078562,68.0580867165938,23.5292595212406,34.8353197328807,32.5291936530873,35.6287994870884,38.8273646570741,30.6523076110008,5.47673941043627,9.15705656797875,5.27246838562732,4.47188767870852,18.7581804977986,8.62515386189829,12.5836954543302,6.5282592781021,11.7632829699862,22.1243114990914,13.7536051170603,19.0798674142654,8.09265843438391,5.81890077199236,9.50747105259269,13.2149367506962,7.11435836888911,1.3498495759221,3.9554654502679,3.5524005747305,3.29560121570245,3.84218305321555,27.6851264863635,19.7108669964268,20.8221711737868,4.57041575046086,5.07997644188711,34.4199145794021,39.0091067044222,21.1420320920305,4.40463523997555,3.95830748064082,3.22573719838111,6.3305418110493,7.04454855738554,7.8137005583514,1.67509799400829,3.37657566019008,2.13917546887534,9.1334861496837,13.0981946335175,7.26957838718672,8.17842887998388,36.8033497720045,6.37701875143691,3.44169550792555,1.3599426674155,1.61910957491345,1.29955283489534,1.79210754838934,13.2017754923847,48.7430722573245,48.8397688653393,38.5140136216271,14.6477156567748,30.7983545794363,10.1922095882658,21.3320010945999,51.9578498426914,54.4723710771462,44.9916756063157,9.59144589640104,14.7594593678888,6.38301197978747,60.5463790413814,36.8403228757691,33.4392471021285,27.7329658616826,21.518733405834,13.0693254982862,12.3597483867187,6.50697106139602,73.4226758118396,39.3093445372204,65.8107725011973,80.4892920204469,13.0474232852686,5.85561594023094,5.65506108396329,12.2619386500124,103.999528071139,46.7924130174858,97.2087237108945,3.59497534571574,3.66000482254901,15.8324483662209,2.08589184230732,4.34716277461562,1.45451631191692,3.0825839982874,40.0228699931743,54.9878810096611,6.31806896084187,5.26104639716185,74.9493751465173,56.3260155862009,48.0765886580282,37.2240900054216,41.9785199763693,50.348692071946,35.3255501590178,3.62184719034622,102.179228650167,62.4050064553804,46.0991945309546,41.6471891612392,49.770457611382,36.5664774848275,31.4846668704153,39.0107162964247,49.8571362992397,57.9032791008109,85.2490498186778,66.2802472113606,70.1232919343478,56.1793631758366,53.7410549778427,52.9295783400516,63.7123176224872,53.4828072925938,53.3864068785242,34.5625413406822,40.4817230787162,24.6251196118643,7.94474333549386,3.94739966048397,8.56245449635098,6.44190810049784,3.78521907415429,12.9659811597898,2.31293148088659,15.8670339998127,77.4236349442899,65.7229781365041,51.5469845288373,34.0845156613449,27.1301213490742,30.2458745518969,23.7264530772256,18.6109818838132,14.0747716928151,22.0841683965677,17.7417319278399,16.178749355776,19.8847005884719,10.3553462092271,59.9350567011738,61.1229542462049,29.3040112750009,38.897403618455,31.8082078954906,20.4095235880827,19.0341976744014,5.60918562322488,8.32093257559286,6.16985819609003,3.26097889795864,116.457883789834,131.891085720959,138.739923341455,130.03333781003,119.865048396951,69.2582316845462,59.5531004523178,61.1249804941883,77.1517571058509,30.1913233707445,34.6091081331708,21.2185617717901,13.3866805311969,16.5045620440159,7.71909634181387,6.28160846566456,69.7328395315384,69.5860449407451,69.4257400820519,65.9479597690691,31.6586826565032,18.3293603482231,9.36641509717434,30.7388531007072,35.434350343804,13.3942005672289,7.53771247692395,11.2245238212832,9.25753974921674,1.50791283939272,11.9659250440116,19.6705709207614,10.7615331058846,3.69266356971921,4.33683240391152,49.3444185583793,10.0988370881749,59.00003703084,54.6614242015294,46.100607114819,58.5473554983752,38.5441706162542,36.2337959409706,71.2466834947814,44.7151462604307,30.8324466798288,3.85585579706168,12.9165477539524,38.1060391847926,39.0928702448583,15.6721616823909,2.65490276679926,59.7240364941254,45.9531806586422,34.8919397548412,23.9194533233426,18.4461088766356,17.573123935439,35.989839218273,27.0938007572388,11.06128652775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| ||
|EntrezGene=20133 | |||
|HGNC= | |||
|MCL_coexpression_id=49 | |||
|UniProt=P07742 | |||
|association_with_transcript=136bp_to_ENSMUST00000033283,NM_009103,uc009irp.2_5end | |||
|description=CAGE_peak_1_at_Rrm1_5end | |||
|id=chr7:109590345..109590402,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.22e-07,134;UBERON:0000926,8.91e-07,120;UBERON:0004120,8.91e-07,120;UBERON:0006603,8.91e-07,120 | |||
|phase1_expression=11.69086583865,2.09385244583617,0.909998478779072,0.90739263392049,1.50268718983904,8.05820505177071,10.0453435456076,6.58528949552039,10.13678799492,9.36258105287974,3.08192342805909,5.42450681168288,5.47842335779858,4.89554253546385,120.918843539086,137.683181825082,246.245781101108,15.2999150198745,15.0825876966313,21.6438722416995,31.9762770968022,78.737724302302,95.5991228248503,15.0392877425802,11.6998733344257,2.29692785646008,7.75371593086335,9.48073423817912,9.69119439227507,9.8291750606373,12.6386391073524,43.8171164687146,31.3683041668131,47.5445043046316,45.3497043009501,58.8470644569063,45.7339358027707,41.016099812217,77.3521991078562,68.0580867165938,23.5292595212406,34.8353197328807,32.5291936530873,35.6287994870884,38.8273646570741,30.6523076110008,5.47673941043627,9.15705656797875,5.27246838562732,4.47188767870852,18.7581804977986,8.62515386189829,12.5836954543302,6.5282592781021,11.7632829699862,22.1243114990914,13.7536051170603,19.0798674142654,8.09265843438391,5.81890077199236,9.50747105259269,13.2149367506962,7.11435836888911,1.3498495759221,3.9554654502679,3.5524005747305,3.29560121570245,3.84218305321555,27.6851264863635,19.7108669964268,20.8221711737868,4.57041575046086,5.07997644188711,34.4199145794021,39.0091067044222,21.1420320920305,4.40463523997555,3.95830748064082,3.22573719838111,6.3305418110493,7.04454855738554,7.8137005583514,1.67509799400829,3.37657566019008,2.13917546887534,9.1334861496837,13.0981946335175,7.26957838718672,8.17842887998388,36.8033497720045,6.37701875143691,3.44169550792555,1.3599426674155,1.61910957491345,1.29955283489534,1.79210754838934,13.2017754923847,48.7430722573245,48.8397688653393,38.5140136216271,14.6477156567748,30.7983545794363,10.1922095882658,21.3320010945999,51.9578498426914,54.4723710771462,44.9916756063157,9.59144589640104,14.7594593678888,6.38301197978747,60.5463790413814,36.8403228757691,33.4392471021285,27.7329658616826,21.518733405834,13.0693254982862,12.3597483867187,6.50697106139602,73.4226758118396,39.3093445372204,65.8107725011973,80.4892920204469,13.0474232852686,5.85561594023094,5.65506108396329,12.2619386500124,103.999528071139,46.7924130174858,97.2087237108945,3.59497534571574,3.66000482254901,15.8324483662209,2.08589184230732,4.34716277461562,1.45451631191692,3.0825839982874,40.0228699931743,54.9878810096611,6.31806896084187,5.26104639716185,74.9493751465173,56.3260155862009,48.0765886580282,37.2240900054216,41.9785199763693,50.348692071946,35.3255501590178,3.62184719034622,102.179228650167,62.4050064553804,46.0991945309546,41.6471891612392,49.770457611382,36.5664774848275,31.4846668704153,39.0107162964247,49.8571362992397,57.9032791008109,85.2490498186778,66.2802472113606,70.1232919343478,56.1793631758366,53.7410549778427,52.9295783400516,63.7123176224872,53.4828072925938,53.3864068785242,34.5625413406822,40.4817230787162,24.6251196118643,7.94474333549386,3.94739966048397,8.56245449635098,6.44190810049784,3.78521907415429,12.9659811597898,2.31293148088659,15.8670339998127,77.4236349442899,65.7229781365041,51.5469845288373,34.0845156613449,27.1301213490742,30.2458745518969,23.7264530772256,18.6109818838132,14.0747716928151,22.0841683965677,17.7417319278399,16.178749355776,19.8847005884719,10.3553462092271,59.9350567011738,61.1229542462049,29.3040112750009,38.897403618455,31.8082078954906,20.4095235880827,19.0341976744014,5.60918562322488,8.32093257559286,6.16985819609003,3.26097889795864,116.457883789834,131.891085720959,138.739923341455,130.03333781003,119.865048396951,69.2582316845462,59.5531004523178,61.1249804941883,77.1517571058509,30.1913233707445,34.6091081331708,21.2185617717901,13.3866805311969,16.5045620440159,7.71909634181387,6.28160846566456,69.7328395315384,69.5860449407451,69.4257400820519,65.9479597690691,31.6586826565032,18.3293603482231,9.36641509717434,30.7388531007072,35.434350343804,13.3942005672289,7.53771247692395,11.2245238212832,9.25753974921674,1.50791283939272,11.9659250440116,19.6705709207614,10.7615331058846,3.69266356971921,4.33683240391152,49.3444185583793,10.0988370881749,59.00003703084,54.6614242015294,46.100607114819,58.5473554983752,38.5441706162542,36.2337959409706,71.2466834947814,44.7151462604307,30.8324466798288,3.85585579706168,12.9165477539524,38.1060391847926,39.0928702448583,15.6721616823909,2.65490276679926,59.7240364941254,45.9531806586422,34.8919397548412,23.9194533233426,18.4461088766356,17.573123935439,35.989839218273,27.0938007572388,11.0612865277536,6.32511651449993,5.15677716240934,5.7874732978144,62.121077440802,46.9572022131399,33.0079033948652,28.1970971491215,27.4687979107189,20.8977256164694,16.4411072521884,111.703733038326,36.4351161885771,2.64634077665954,11.2122652000206,24.3811284310817,46.6822038943926,32.34990522485,26.91910755819,13.699599321603,5.00648315428376,103.718624644297,56.9627755578494,91.3009019932679,185.166193235611,185.904149700594,119.879762760218,68.3313288575298,66.3369884014139,56.3855893122049,2.86401185404534,71.9664385397083,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| |||
|short_description=p1@Rrm1 | |||
}} | |||
Revision as of 11:22, 14 September 2013
| Short description: | p1@Rrm1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Rrm1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:49 |
| Association with transcript: | 136bp_to_ENSMUST00000033283, NM_009103, uc009irp.2_5end |
| EntrezGene: | Rrm1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| primordium | 3.22e-07 | 134 |
| mesoderm | 8.91e-07 | 120 |
| mesoderm-derived structure | 8.91e-07 | 120 |
| presumptive mesoderm | 8.91e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
